mRNA_H-elongata_contig50666.12316.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig50666.12316.1
Unique NamemRNA_H-elongata_contig50666.12316.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig50666.12316.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 1.210e-49
Identity = 107/304 (35.20%), Postives = 167/304 (54.93%), Query Frame = 1
Query:    1 MVKSGGTTVKHLLHHFFISNNIYRSEYANAEWLDGIEGTKSAKRVMTTGQGIIYGGYAEALRPMVGSG--NCKWFTIFRHPASRLVSAFFYCKYMNRKAPLCSQGQIDF--DTIDILSFAEYWGNYGLRQYALAFISNEEILASPSSRNC----------QTCSAWYMVKQHLQSLQQQTSNGAFTPSLASNSTDEYG---LYMMLESTLEIISSRYTAVGILEDMTKTMRLFDSALGMDNFNWTVQSQMAMAANEDLKCKDEEHAVLHEARTNPAIIKYIWLDLILYEQATEIFAKQVEQYGL 861
            M K+GG+TVK++L  +  + N+    Y + +WL   EG   A+  +     +++G Y E LRP  G G   CKWFTIFRHP  RLVSA+FYCK   +   LC+   +D   D  D+ +FAE+WG++GLRQ+ALAF+  EE+LA+    +           ++C  WY +K +LQ    +   G  +     +     G   +  +L+   E++++ Y AVG+LE    ++ LF+ ALGM  F+W          N D    +EE  +L  + T+P + +Y+ LDL+LY+ A  +  +QV++YGL
Sbjct:    1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWL---EGKDFAQDFLGDENSLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDG-LCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300          
BLAST of mRNA_H-elongata_contig50666.12316.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 1.100e-46
Identity = 105/297 (35.35%), Postives = 152/297 (51.18%), Query Frame = 1
Query:    1 MVKSGGTTVKHLLHHFFISNNIYRSEYANAEWLDGIEGTKSAKRVMTTGQGIIYGGYAEALRPMVGSGNCKWFTIFRHPASRLVSAFFYCKYMNRKAPLCSQGQIDFDTIDILSFAEYWGNYGLRQYALAFISNEEILASPS-SRNCQTCS--------AWYMVKQHLQSLQQQTSNGAFTPSLASNSTDEYGLYMMLESTLEIISSRYTAVGILEDMTKTMRLFDSALGMDNFNWTVQSQMAMAANED-LKCKDEEHAVLHEARTNPAIIKYIWLDLILYEQATEIFAKQVEQYGL 861
            M KSGG TV+ ++  F     +  + + + EW  G      A+  +       YGGY E LR M    +CKWFT+FRHP SR+VSA+FYC+  +    LC+   +D   +D+L+FAE+WGNYGLRQ+ALA I  E++  +   S  CQ           AWY  K +L    Q    G   P        E GL   L S  E +S+RY AVGI+E+   +M LF+  L +  F+W  + Q +   N    + +    + L  A  +P + K+IWLD++LY+ A  +   QV   G+
Sbjct:   58 MNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSG---RSYAETFVKENAVFTYGGYTEGLR-MYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQ-LCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLHLPHQDDFCGPTQP--------ESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341          
BLAST of mRNA_H-elongata_contig50666.12316.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 6.560e-44
Identity = 107/304 (35.20%), Postives = 157/304 (51.64%), Query Frame = 1
Query:    7 KSGGTTVKHLLHHFFISNNIYRSEYANAEWLDGIEGTKS--AKRVMTTGQGIIYGGYAEALR------PMVGSGNCKWFTIFRHPASRLVSAFFYCKYMNRKAPLCSQGQIDFDTIDILSFAEYWGNYGLRQYALAFISNEEI---LASPSSRNCQTCSA--------WYMVKQHLQSLQQQTSNGAFTPSLASNSTDEYGLYMMLESTLEIISSRYTAVGILEDMTKTMRLFDSALGMDNFNWTVQSQMAMAANEDLKCKDEEHAVLHEARTNPAIIKYIWLDLILYEQATEIFAKQVEQYGL 861
            K+GGTTVK LL   F S     + Y + +W  G    +S  A      G     GGY EALR      P      C+WFT+FRHP SRLVSA++YC+  +    LC+   +    +D+++FA +WGN+ LRQ+AL F+S++++   L SP+       +A        WYM+K  L        +G    +    +  EY    M    ++++   Y  VGILED   T+ LFDSAL M    W  + + +   N D + K E+  VL +A ++P I+K++ LDL LY QA +IF +Q   YG+
Sbjct:   96 KAGGTTVKRLL---FDSWGSESTTYDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCRE-DPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDR-----SGVADDTSPEGTRLEY----MFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386          
BLAST of mRNA_H-elongata_contig50666.12316.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 1.020e-41
Identity = 107/290 (36.90%), Postives = 150/290 (51.72%), Query Frame = 1
Query:    7 KSGGTTVKHLLHHFFISNNIYRSEYANAEWLDGIEGTKSAKRVMTTGQGIIYGGYAEALRPMVGSGNCKWFTIFRHPASRLVSAFFYCKYMNRKAPLCSQGQIDFDTIDILSFAEYWGNYGLRQYALAFISNEEILASPSSRNCQTCSAWYMVKQHLQSLQQQTSNGAFTPSLASNST--DEYGLYMM---LESTLEIISSRYTAVGILEDMTKTMRLFDSALGMDNFNWTVQSQMAMAANEDLKCKDEEHAVLHEARTNPAIIKYIWLDLILYEQATEIFAKQVEQYGL 861
            K+GGTTVK  L ++  S N       +++W     G K  + ++     +I GGYAE LR     G CKWFT+ RHP +RL+SAF+YC   NR   LC+      +  DI  FA++WGNY L Q+AL  +   EI A           AW+  K + +       N     S A+N T  DE+    +   L+   E++ S Y AVGILE   ++M LFD AL +  FNWTV S          K   E+ A+L  A T+P + +Y+WLDL+LYE A  +  +Q+ +Y L
Sbjct:   45 KAGGTTVKTHLRNYAESRN-ETVALCHSDWY--ARGDKGIQDLLNDKPVLIAGGYAEGLRTSAFQG-CKWFTMMRHPIARLISAFYYCSGGNRDQ-LCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAEEVD-----APAWFKAKLYFEGRLGYPGN----MSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIV-EKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDL 319          
BLAST of mRNA_H-elongata_contig50666.12316.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 4.990e-40
Identity = 103/302 (34.11%), Postives = 162/302 (53.64%), Query Frame = 1
Query:    7 KSGGTTVKHLLHHFFISNNIYRSEYANAEWL--DGIEGTKSAKRVMTTGQGIIYGGYAEALRPM--VGSGNCKWFTIFRHPASRLVSAFFYCKYMNRKAPLCSQGQIDFDTIDILSFAEYWGNYGLRQYALAFISNE---EILASPSSR-----NCQTCSAWYMVKQHLQSLQQQT-----SNGAFTPSLASNSTDEYGLYMMLESTLEIISSRYTAVGILEDMTKTMRLFDSALGMDNFNWTVQSQMAMAANEDLKCKDEEHAVLHEARTNPAIIKYIWLDLILYEQATEIFAKQVEQYGL 861
            K GG+TVK++L   + S     S Y + +W   D I      K        ++ GGY EALR    V +G C++FT+FRHP +R+VSA+FYC+     A  C+   +D   +D+L+FA++WGN+ +RQ+AL F+ ++   E + +P ++     + +  + WY +K +L+  ++        + A T    + +T E  LY +L+  +++I S Y AVGILE    T+ LFD AL +    W  Q         D K K  E   L +A T+  + KY+ LDL+LYE A ++F +Q   YGL
Sbjct:  164 KCGGSTVKYMLRRSYGSRY---SIYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAG-CRFFTLFRHPIARMVSAYFYCRSTLGDAA-CASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460          
BLAST of mRNA_H-elongata_contig50666.12316.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 7.140e-39
Identity = 101/299 (33.78%), Postives = 158/299 (52.84%), Query Frame = 1
Query:    7 KSGGTTVKHLLH-----HFFISNNIYRSEYANAEWLDGIEGTKS--AKRVMTTGQGIIYGGYAEALR--PMVGSGNCKWFTIFRHPASRLVSAFFYCKYMNRKAPLCSQGQIDFDTIDILSFAEYWGNYGLRQYALAFISNEEILASPSSRNCQTCSAWYMVKQHLQSLQQQTSN-----GAFTPSLASNSTDEYGLYMMLESTLEIISSRYTAVGILEDMTKTMRLFDSALGMDNFNWTVQSQMAMAANEDLKCKDEEHAVLHEARTNPAIIKYIWLDLILYEQATEIFAKQVEQYGL 861
            K GG+TVK LL       FFI        Y +  W  G E +    AK  +     ++ GGY EALR    VG+G C++FT+FRHP +R+VSA+FYC+ ++     C+   +    +D+L+FA++WGN+ LRQ+AL F+ ++++               Y +K +L+  Q++         A T    + +T +  LY +L+  ++++   Y AVGILE    T+RLFD  L M   NW  Q   +   + D+  K  E   L +A T+  + KY+ LDL+LYE A ++F +Q   +GL
Sbjct:  185 KCGGSTVKDLLEDRWGSRFFI--------YDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAG-CRFFTLFRHPIARMVSAYFYCRSVSGDVA-CASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQE-------------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460          
BLAST of mRNA_H-elongata_contig50666.12316.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 5.480e-34
Identity = 73/216 (33.80%), Postives = 119/216 (55.09%), Query Frame = 1
Query:  226 FRHPASRLVSAFFYCKYMNRKAPLCSQGQIDFDTIDILSFAEYWGNYGLRQYALAFISNEEILASPSSRNCQ----TCSAWYMVKQHLQSLQQQTSNGAFTPSLASNSTDEYGLYMMLESTLEIISSRYTAVGILEDMTKTMRLFDSALGMDNFNWTVQSQMAMAANEDLKCKDEEHAVLHEARTNPAIIKYIWLDLILYEQATEIFAKQVEQYGL 861
            ++ P  RLVSA+FYCK  N    LC+   +     D+ +FA++WGNYGLRQ++LAF+  E++ A+   R           WY VK++ ++        A      + ++++  +  +L+   +++S  Y+AVGILE    +M LF+ AL + +FNW   S+     N D +  DEE   L  A  +P + K +WLD+ LY+ A  +  KQVE++G+
Sbjct:   18 YKCPIPRLVSAYFYCK-QNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAAEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQE--TGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGI 230          
BLAST of mRNA_H-elongata_contig50666.12316.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 1.960e-32
Identity = 86/253 (33.99%), Postives = 136/253 (53.75%), Query Frame = 1
Query:  124 AKRVMTTGQGIIYGGYAEALRPMVGSGNCKWFTIFRHPASRLVSAFFYCKYMNRKAPLCSQGQIDFDTIDILSFAEYWGNYGLRQYALAFISNEEILASPSSRNCQT-CSAWYMVKQHLQSLQQQTSNGAFTPSLASNSTDEYGLYMMLESTLEIISSRYTAVGILEDMTKTMRLFDSALGMDNFNWTVQSQMAMAANEDLKCKDEEHAV-----LHEARTNPAIIKYIWLDLILYEQATEIFAKQVEQYGLE 864
            A  VM +   +++GG  E+LR   G  +CKW TIFRHP +RL+SA+ +C     K P+C   +    +  + +FAE WGN+ +RQ+ALA +S   +    + R  +T  S WY+VK++L       + G           ++  L   LE    ++S++Y AVGI +++  TM LF  AL M+  +W+  S   +  NE+ K +D E+ +       +A  NP I+  + LD+ LYE A  +F  QV Q+G+E
Sbjct:   36 AADVMASRWKLLHGGCVESLRNHKGR-SCKWITIFRHPIARLLSAYDHCLGAP-KDPVCPPTE----STGLAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSMWYLVKEYL-------ARGGIA--------EDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWS-SSWATLGINEEDK-QDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGIE 265          
BLAST of mRNA_H-elongata_contig50666.12316.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 1.240e-30
Identity = 85/253 (33.60%), Postives = 136/253 (53.75%), Query Frame = 1
Query:  124 AKRVMTTGQGIIYGGYAEALRPMVGSGNCKWFTIFRHPASRLVSAFFYCKYMNRKAPLCSQGQIDFDTIDILSFAEYWGNYGLRQYALAFISNEEILASPSSRNCQT-CSAWYMVKQHLQSLQQQTSNGAFTPSLASNSTDEYGLYMMLESTLEIISSRYTAVGILEDMTKTMRLFDSALGMDNFNWTVQSQMAMAANEDLKCKDEEHAV-----LHEARTNPAIIKYIWLDLILYEQATEIFAKQVEQYGLE 864
            A  VM +   +++GG  E+LR      +CKW TIFRHP +RL+SA+ +C     K P+C   +    +  ++ FAE WGN+ +RQ+AL  +S   +    + R  +T  S WY+VK++L       + G           ++  L  MLE    ++S++Y AVGI +++  TM LF  AL M+  +W+  S   +  NE++K +D E+ +       +A  NP I+  + LD+ LYE A  +F  QV Q+G+E
Sbjct:  314 AADVMASHWKLLHGGCVESLRNHK-ERSCKWLTIFRHPIARLLSAYHHCLEAP-KDPVCPPTE----STGLVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTGTSMWYLVKEYL-------ARGGIA--------EDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWS-SSWATLGINEEVK-QDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGIE 543          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50666.12316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FS84_ECTSI1.210e-4935.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JY77_9PHAE1.100e-4635.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G715_ECTSI6.560e-4435.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNJ0_9PHAE1.020e-4136.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWQ3_ECTSI4.990e-4034.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G716_ECTSI7.140e-3933.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L061_9PHAE5.480e-3433.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU75_ECTSI1.960e-3233.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQM0_9PHAE1.240e-3033.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50666contigH-elongata_contig50666:649..2125 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score167.9
Seed ortholog evalue6.8e-39
Seed eggNOG ortholog2880.D7G715
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2CYGC@1,2S47N@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size867
Cds size867
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50666.12316.1prot_H-elongata_contig50666.12316.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig50666 649..2125 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930832.200024-CDS-H-elongata_contig50666:648..9321622930832.200024-CDS-H-elongata_contig50666:648..932Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50666 649..932 +
1691679589.6043925-CDS-H-elongata_contig50666:648..9321691679589.6043925-CDS-H-elongata_contig50666:648..932Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50666 649..932 +
1622930832.218007-CDS-H-elongata_contig50666:1170..13381622930832.218007-CDS-H-elongata_contig50666:1170..1338Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50666 1171..1338 +
1691679589.6206675-CDS-H-elongata_contig50666:1170..13381691679589.6206675-CDS-H-elongata_contig50666:1170..1338Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50666 1171..1338 +
1622930832.2451417-CDS-H-elongata_contig50666:1710..21251622930832.2451417-CDS-H-elongata_contig50666:1710..2125Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50666 1711..2125 +
1691679589.6310227-CDS-H-elongata_contig50666:1710..21251691679589.6310227-CDS-H-elongata_contig50666:1710..2125Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50666 1711..2125 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig50666.12316.1

>prot_H-elongata_contig50666.12316.1 ID=prot_H-elongata_contig50666.12316.1|Name=mRNA_H-elongata_contig50666.12316.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=289bp
MVKSGGTTVKHLLHHFFISNNIYRSEYANAEWLDGIEGTKSAKRVMTTGQ
GIIYGGYAEALRPMVGSGNCKWFTIFRHPASRLVSAFFYCKYMNRKAPLC
SQGQIDFDTIDILSFAEYWGNYGLRQYALAFISNEEILASPSSRNCQTCS
AWYMVKQHLQSLQQQTSNGAFTPSLASNSTDEYGLYMMLESTLEIISSRY
TAVGILEDMTKTMRLFDSALGMDNFNWTVQSQMAMAANEDLKCKDEEHAV
LHEARTNPAIIKYIWLDLILYEQATEIFAKQVEQYGLE*
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mRNA from alignment at H-elongata_contig50666:649..2125+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig50666.12316.1 ID=mRNA_H-elongata_contig50666.12316.1|Name=mRNA_H-elongata_contig50666.12316.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1477bp|location=Sequence derived from alignment at H-elongata_contig50666:649..2125+ (Himanthalia elongata Himel1 dioecious)
ATGGTGAAATCTGGTGGGACAACCGTGAAGCATCTACTTCATCATTTTTT CATCAGTAACAATATCTATCGGAGCGAGTATGCCAACGCTGAGTGGCTCG ATGGAATCGAAGGTACGAAATCTGCTAAGAGAGTTATGACAACAGGTCAA GGCATAATCTACGGTGGATATGCAGAAGCATTGCGCCCAATGGTCGGCAG TGGAAACTGCAAATGGTTCACCATTTTTAGGCATCCAGCGTCAAGGCTCG TATCTGCATTTTTCTATTGCAAGTACATGAACAGGTGGGCAACATCCAAT CGGGGTGATATAATATTTTCAAACGCAGAAATATCCGAAGAATAAAGCAT TTGCACTCGGAAACTGTTCAATATATCATTATCAGAATGTCTTAACCGTG TGTGGGCTGTCAAGGACACAACAGCGCGACTTAGCGCATTCTCATTGTTC ATATCAAGAGTCGCCTTCTACCTCTTTCACTACTGTGGTTTGGATTCACT CACGATAATGCGTAACTCCCAGGAAAGCCCCCCTGTGCTCTCAAGGTCAA ATCGACTTCGACACAATTGACATATTGTCTTTCGCGGAGTATTGGGGAAA CTACGGCCTGCGCCAGTACGCCCTCGCCTTCATCTCGAATGAAGAGATAC TTGCATCTCCTTCTAGTCGGAACTGTCAAACATGCTCGGCGTGAGTACCA ATACAATGTCAGATGACCGCAGTGATGCCACCTAGCCACTGATGTTCCAT ACTTACTGACAAAAATGCACATTATTGCAGAAATATGGCATCCAATCGCC TGCCTTGTGATTTTTCTTATGCTGCCAGCGACACCTCTGCAAGGAGTAAG GATAGAAATATGCAGAAATTGCCAAGCACTTGATCTTGATGTACACAACG CTAGTCCTGCTACGTCATGGCCAAACCATGCGCTTGGCGGAAAGTGTAAA ACGGATGATAACTACATGGCCAAACATGACACATTGCGTGGTAGGTTTAA AAACGCCTGCAATATGCCTTGATGAAATACGCTGCGTCTTGTGCCTAATT TTCACCAACCAGGTGGTATATGGTGAAGCAACATCTGCAGAGTCTACAGC AGCAAACCTCGAACGGTGCCTTCACCCCTTCCTTAGCTAGCAATTCAACC GACGAATATGGTTTGTATATGATGCTAGAGTCCACTCTTGAAATTATCAG TTCAAGGTACACTGCAGTGGGTATTTTGGAAGATATGACCAAAACTATGC GTCTATTCGACAGTGCCCTCGGTATGGATAATTTCAACTGGACAGTTCAA AGTCAGATGGCTATGGCGGCAAACGAAGACCTCAAGTGCAAGGATGAAGA GCATGCTGTCTTACACGAGGCCAGGACCAATCCCGCCATCATCAAATATA TTTGGCTGGACCTTATCCTGTACGAGCAAGCCACGGAGATATTCGCTAAG CAGGTTGAACAATACGGGCTAGAATAA
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Coding sequence (CDS) from alignment at H-elongata_contig50666:649..2125+

>mRNA_H-elongata_contig50666.12316.1 ID=mRNA_H-elongata_contig50666.12316.1|Name=mRNA_H-elongata_contig50666.12316.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1734bp|location=Sequence derived from alignment at H-elongata_contig50666:649..2125+ (Himanthalia elongata Himel1 dioecious)
ATGGTGAAATCTGGTGGGACAACCGTGAAGCATCTACTTCATCATTTTTT
CATCAGTAACAATATCTATCGGAGCGAGTATGCCAACGCTGAGTGGCTCG
ATGGAATCGAAGGTACGAAATCTGCTAAGAGAGTTATGACAACAGGTCAA
GGCATAATCTACGGTGGATATGCAGAAGCATTGCGCCCAATGGTCGGCAG
TGGAAACTGCAAATGGTTCACCATTTTTAGGCATCCAGCGTCAAGGCTCG
TATCTGCATTTTTCTATTGCAAGTACATGAACAGATGGTGAAATCTGGTG
GGACAACCGTGAAGCATCTACTTCATCATTTTTTCATCAGTAACAATATC
TATCGGAGCGAGTATGCCAACGCTGAGTGGCTCGATGGAATCGAAGGTAC
GAAATCTGCTAAGAGAGTTATGACAACAGGTCAAGGCATAATCTACGGTG
GATATGCAGAAGCATTGCGCCCAATGGTCGGCAGTGGAAACTGCAAATGG
TTCACCATTTTTAGGCATCCAGCGTCAAGGCTCGTATCTGCATTTTTCTA
TTGCAAGTACATGAACAGGAAAGCCCCCCTGTGCTCTCAAGGTCAAATCG
ACTTCGACACAATTGACATATTGTCTTTCGCGGAGTATTGGGGAAACTAC
GGCCTGCGCCAGTACGCCCTCGCCTTCATCTCGAATGAAGAGATACTTGC
ATCTCCTTCTAGTCGGAACTGTCAAACATGCTCGGCGAAAGCCCCCCTGT
GCTCTCAAGGTCAAATCGACTTCGACACAATTGACATATTGTCTTTCGCG
GAGTATTGGGGAAACTACGGCCTGCGCCAGTACGCCCTCGCCTTCATCTC
GAATGAAGAGATACTTGCATCTCCTTCTAGTCGGAACTGTCAAACATGCT
CGGCGTGGTATATGGTGAAGCAACATCTGCAGAGTCTACAGCAGCAAACC
TCGAACGGTGCCTTCACCCCTTCCTTAGCTAGCAATTCAACCGACGAATA
TGGTTTGTATATGATGCTAGAGTCCACTCTTGAAATTATCAGTTCAAGGT
ACACTGCAGTGGGTATTTTGGAAGATATGACCAAAACTATGCGTCTATTC
GACAGTGCCCTCGGTATGGATAATTTCAACTGGACAGTTCAAAGTCAGAT
GGCTATGGCGGCAAACGAAGACCTCAAGTGCAAGGATGAAGAGCATGCTG
TCTTACACGAGGCCAGGACCAATCCCGCCATCATCAAATATATTTGGCTG
GACCTTATCCTGTACGAGCAAGCCACGGAGATATTCGCTAAGCAGGTTGA
ACAATACGGGCTAGAATAAGTGGTATATGGTGAAGCAACATCTGCAGAGT
CTACAGCAGCAAACCTCGAACGGTGCCTTCACCCCTTCCTTAGCTAGCAA
TTCAACCGACGAATATGGTTTGTATATGATGCTAGAGTCCACTCTTGAAA
TTATCAGTTCAAGGTACACTGCAGTGGGTATTTTGGAAGATATGACCAAA
ACTATGCGTCTATTCGACAGTGCCCTCGGTATGGATAATTTCAACTGGAC
AGTTCAAAGTCAGATGGCTATGGCGGCAAACGAAGACCTCAAGTGCAAGG
ATGAAGAGCATGCTGTCTTACACGAGGCCAGGACCAATCCCGCCATCATC
AAATATATTTGGCTGGACCTTATCCTGTACGAGCAAGCCACGGAGATATT
CGCTAAGCAGGTTGAACAATACGGGCTAGAATAA
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