mRNA_H-elongata_contig50590.12309.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig50590.12309.1
Unique NamemRNA_H-elongata_contig50590.12309.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: D8LN81_ECTSI (TBC1 domain family member 23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN81_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 2.200e-68
Identity = 115/154 (74.68%), Postives = 136/154 (88.31%), Query Frame = 1 
Query:    1 QVLLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSALLVRNRDAIMS----------VEQAHMMPETVQGLTITDKQDLEELIVQARQMLKKIPETFLRTVRSCCSDHGNIPLDTSRSLFCESVR 432
            +VLL+Y+DP LA KLD+ADFVPELYATAWLITLFSRNL+++LV+RLWDVYLAVND SLVFFLL+ALLVRNR AI++          V+QAHMMPE +Q LT+TDK+DLEELIVQAR+ML+K+PE+FL+TVRSCCSD  N+PLDTSRSLFCESVR
Sbjct:   82 RVLLFYVDPGLARKLDEADFVPELYATAWLITLFSRNLTMELVVRLWDVYLAVNDPSLVFFLLAALLVRNRQAIIASDRTRNTILGVDQAHMMPEMIQSLTVTDKEDLEELIVQAREMLRKVPESFLQTVRSCCSDQCNVPLDTSRSLFCESVR 235
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BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A8K1C6A6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6A6_PYTOL)

HSP 1 Score: 87.8 bits (216), Expect = 2.220e-17
Identity = 46/126 (36.51%), Postives = 77/126 (61.11%), Query Frame = 1 
Query:    1 QVLLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSALLVRNRDAIMSVEQAHMMPETVQGLTITDKQDLEELIVQARQMLKKIPETFLRTVRSCCSD 378
            ++L+ Y DP L + LD     PELY T W +TLFSRNLS +LV++LWD ++   D  L+ F+  AL+  +RDAI   + A M+P+ +  +T   ++ ++ +  +A  +++  P++F R + S C D
Sbjct:  225 RLLMRYHDPMLCNYLDQHAMTPELYVTPWFMTLFSRNLSRELVLQLWDFFILHEDPYLLHFVAYALVEVHRDAIFQSDVA-MLPQVLSNITFETRERMDLVCQRALTLMETTPQSFKRDLYSVCYD 349
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BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A7S2F8L2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F8L2_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 5.190e-15
Identity = 44/119 (36.97%), Postives = 67/119 (56.30%), Query Frame = 1 
Query:   28 SLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSALLVRNRDAIMSVEQAHMMPETVQGLTITDKQDLEELIVQARQMLKKIPETFLRTVRSCCSDHG 384
            SLA +L+     PELYATAW IT+ +R L++DL MR WDV LA  D++    L   LL   R A+++ + A  MPET+  + + D+   + L+  A       P + L ++R+ C+  G
Sbjct:    1 SLARQLEREHIGPELYATAWFITVLARGLTMDLCMRCWDVVLATGDAAFTCLLAMELLKTQRFALLTSD-ATQMPETLSLIKVEDEAATDALLRAALASYNATPGSLLDSLRTVCASTG 118
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BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A7S3YFA6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFA6_HETAK)

HSP 1 Score: 75.1 bits (183), Expect = 5.460e-14
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 1 
Query:    1 QVLLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSAL 198
            ++LL Y DP+LA  L  A F PELYAT W++TLFSR L++ LV+RLWD  L  +D + VFFL+ AL
Sbjct:  105 ELLLAYHDPALARHLAGAGFTPELYATPWILTLFSRQLAVGLVLRLWDTLLGADDPNFVFFLMLAL 170
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BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A7J7IID8_9RHOD (TBC1 domain family member 23 n=2 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IID8_9RHOD)

HSP 1 Score: 77.8 bits (190), Expect = 6.610e-14
Identity = 42/120 (35.00%), Postives = 71/120 (59.17%), Query Frame = 1 
Query:    7 LLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSALLVRNRDAIMSVEQAHMMPETVQGLTITDKQDLEELIVQARQMLKKIPETFLRTVRS 366
            LL++ DP +AS+L+      ++YATAWL+T+F+RNL+++ V+ LWDV L V D  L  F+    LV +R +++   +A  +PE +  +    +QD+E     AR++  + P   L   R+
Sbjct:  324 LLWFHDPEVASRLERYQLSTDMYATAWLVTVFARNLAMETVLVLWDVLLLVADPLLTIFVALVSLVSSRQSLLISNEA-TLPEQLLSIPFQSRQDMEAAWQWARKLAARTPNQALDRARA 442
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BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A2S2NMM9_SCHGA (TBC1 domain family member 23 (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2NMM9_SCHGA)

HSP 1 Score: 70.1 bits (170), Expect = 9.340e-12
Identity = 41/124 (33.06%), Postives = 64/124 (51.61%), Query Frame = 1 
Query:    1 QVLLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSALLVRNRDAIMSVEQA------HMMPETVQGLTITDKQDLEELIVQARQMLKKIPETFLR 354
            ++LL Y DP L + LD     PELY+ +W+ TLFS   SL++++ +WD+YLA  D   +FFL    ++  RD I S++         ++      L I D  D   L   A    K+ P +F++
Sbjct:  118 RILLLYHDPELCNLLDSLKLGPELYSDSWIQTLFSETCSLEVILNIWDLYLAKKDRFFIFFLALVFIINARDHIFSLKHQPKTQLIEILGNLPSQLAIDDINDFWSL---AEYYDKQTPSSFIK 238
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BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A6G0TDL0_APHGL (Rab-GAP TBC domain-containing protein n=10 Tax=Aphidinae TaxID=133076 RepID=A0A6G0TDL0_APHGL)

HSP 1 Score: 70.9 bits (172), Expect = 1.680e-11
Identity = 41/126 (32.54%), Postives = 65/126 (51.59%), Query Frame = 1 
Query:    1 QVLLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSALLVRNRDAIMSVEQA------HMMPETVQGLTITDKQDLEELIVQARQMLKKIPETFLRTV 360
            ++LL Y DP L + LD     PELY+ +W+ TLFS   SL++++ +WD+YLA  D   +FFL    ++  RD I S++         ++      L I D  D   L   A    K+ P +F++ +
Sbjct:  159 RILLLYHDPELCNLLDSLKLGPELYSNSWIQTLFSETCSLEVILSIWDLYLAKKDRFFIFFLALVFIINARDHIFSLKHQPKTQLIEILGNLPSQLAIDDINDFWSL---AEYYDKQTPSSFIKDI 281
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BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A2S2R1L8_9HEMI (TBC1 domain family member 23 n=1 Tax=Sipha flava TaxID=143950 RepID=A0A2S2R1L8_9HEMI)

HSP 1 Score: 68.9 bits (167), Expect = 7.850e-11
Identity = 42/133 (31.58%), Postives = 64/133 (48.12%), Query Frame = 1 
Query:    1 QVLLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSALLVRNRDAIMS------VEQAHMMPETVQGLTITDKQDLEELIVQARQMLKKIPETFLRTVRSCCSDH 381
            ++LL Y DP L + LD     PE Y+ +W+ TLF+   SL++++ +WD YLA  D   +FFL    ++  RD + S      ++   ++      L I D  D   L   A    KK P +F + V     DH
Sbjct:  159 RILLLYHDPELCNLLDSLKIGPEHYSESWIQTLFAETCSLEVILTIWDFYLAKKDRFFIFFLALVFIINARDHVFSLKHQPKIQLIEILGNLPAQLAIDDINDFWSL---AEYYDKKTPSSFKKDVAGYIFDH 288
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BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A813RFZ0_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813RFZ0_9BILA)

HSP 1 Score: 67.4 bits (163), Expect = 2.870e-10
Identity = 40/126 (31.75%), Postives = 63/126 (50.00%), Query Frame = 1 
Query:    1 QVLLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVYLAVNDSSLVFFLLSALLVRNRDAIMSV---EQAHMMPETVQGLTITDKQDLEELIVQARQMLKKIPETFLRTVRSC 369
            ++LL Y DP L S LD     P+LYA AW+ +LF+ N SLD+ + LWD Y    D    FFL   LL+  ++ +  +   +++ ++    Q  +     DLE+    A       P++F +   SC
Sbjct:  560 RLLLLYHDPELCSFLDTKKVTPDLYAHAWIRSLFAANCSLDVTLDLWDGYFQQADQFFAFFLALVLLMFAKEHLFKMSGADKSEIIKFLSQAASNLSANDLEDFCSLANHYASNTPQSFRKEFYSC 685
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BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Match: A0A7S1ER00_9RHOD (TBC1 domain family member 23 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ER00_9RHOD)

HSP 1 Score: 66.6 bits (161), Expect = 4.990e-10
Identity = 40/98 (40.82%), Postives = 63/98 (64.29%), Query Frame = 1 
Query:    7 LLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWD--VYLAVNDSSLVFFLLSALLVRNRDAIMSVEQAHMMPETVQGLTITDKQDL 294
            L++Y DP LAS  +      +L+AT+W++T FSRNLS++L + LWD  V  A +   L+FF L  LL+ NR+ +++V    ++PETV GL    +Q++
Sbjct:  180 LMHYHDPQLASHFELNHVSVDLFATSWILTAFSRNLSIELTLTLWDRMVLDAESPCGLLFFCLE-LLMSNRNQLLNVSHV-LLPETVNGLCPKTEQEV 275
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50590.12309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN81_ECTSI2.200e-6874.68TBC1 domain family member 23 n=2 Tax=Ectocarpus Ta... [more]
A0A8K1C6A6_PYTOL2.220e-1736.51Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2F8L2_9STRA5.190e-1536.97Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S3YFA6_HETAK5.460e-1456.06Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7J7IID8_9RHOD6.610e-1435.00TBC1 domain family member 23 n=2 Tax=Cyanidiococcu... [more]
A0A2S2NMM9_SCHGA9.340e-1233.06TBC1 domain family member 23 (Fragment) n=1 Tax=Sc... [more]
A0A6G0TDL0_APHGL1.680e-1132.54Rab-GAP TBC domain-containing protein n=10 Tax=Aph... [more]
A0A2S2R1L8_9HEMI7.850e-1131.58TBC1 domain family member 23 n=1 Tax=Sipha flava T... [more]
A0A813RFZ0_9BILA2.870e-1031.75Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A7S1ER00_9RHOD4.990e-1040.82TBC1 domain family member 23 n=1 Tax=Timspurckia o... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50590contigH-elongata_contig50590:138..3731 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score229.6
Seed ortholog evalue9.6e-58
Seed eggNOG ortholog2880.D8LN81
Preferred nameTBC1D23
GOsGO:0000003,GO:0001667,GO:0001817,GO:0001819,GO:0002064,GO:0002065,GO:0002066,GO:0003006,GO:0003674,GO:0005096,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005802,GO:0006810,GO:0006928,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007399,GO:0007417,GO:0007420,GO:0008047,GO:0008150,GO:0009790,GO:0009888,GO:0009987,GO:0010631,GO:0012505,GO:0016043,GO:0016192,GO:0016197,GO:0016477,GO:0016482,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0030030,GO:0030154,GO:0030182,GO:0030234,GO:0030695,GO:0030707,GO:0030855,GO:0031175,GO:0031347,GO:0031984,GO:0032101,GO:0032501,GO:0032502,GO:0032504,GO:0032675,GO:0032680,GO:0032755,GO:0040011,GO:0042147,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0044093,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046907,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048568,GO:0048583,GO:0048609,GO:0048666,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050727,GO:0050789,GO:0050790,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051336,GO:0051345,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0060322,GO:0060429,GO:0060589,GO:0065007,GO:0065009,GO:0071840,GO:0080134,GO:0090130,GO:0090132,GO:0098772,GO:0098791,GO:0120036,GO:1903555,GO:1990403
EggNOG free text desc.embryonic brain development
EggNOG OGsKOG3636@1,KOG3636@2759
Ec32 ortholog descriptionRab-GTPase-TBC domain
Ec32 orthologEc-05_003850.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size435
Cds size435
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50590.12309.1prot_H-elongata_contig50590.12309.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig50590 138..3731 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930831.6048489-CDS-H-elongata_contig50590:137..2841622930831.6048489-CDS-H-elongata_contig50590:137..284Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50590 138..284 -
1691679589.313489-CDS-H-elongata_contig50590:137..2841691679589.313489-CDS-H-elongata_contig50590:137..284Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50590 138..284 -
1622930831.6233032-CDS-H-elongata_contig50590:875..9511622930831.6233032-CDS-H-elongata_contig50590:875..951Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50590 876..951 -
1691679589.3485866-CDS-H-elongata_contig50590:875..9511691679589.3485866-CDS-H-elongata_contig50590:875..951Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50590 876..951 -
1622930831.6394114-CDS-H-elongata_contig50590:1761..18661622930831.6394114-CDS-H-elongata_contig50590:1761..1866Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50590 1762..1866 -
1691679589.3632386-CDS-H-elongata_contig50590:1761..18661691679589.3632386-CDS-H-elongata_contig50590:1761..1866Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50590 1762..1866 -
1622930831.6529512-CDS-H-elongata_contig50590:3624..37311622930831.6529512-CDS-H-elongata_contig50590:3624..3731Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50590 3625..3731 -
1691679589.3784661-CDS-H-elongata_contig50590:3624..37311691679589.3784661-CDS-H-elongata_contig50590:3624..3731Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50590 3625..3731 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig50590.12309.1

>prot_H-elongata_contig50590.12309.1 ID=prot_H-elongata_contig50590.12309.1|Name=mRNA_H-elongata_contig50590.12309.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp
QVLLYYLDPSLASKLDDADFVPELYATAWLITLFSRNLSLDLVMRLWDVY
LAVNDSSLVFFLLSALLVRNRDAIMSVEQAHMMPETVQGLTITDKQDLEE
LIVQARQMLKKIPETFLRTVRSCCSDHGNIPLDTSRSLFCESVR*
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mRNA from alignment at H-elongata_contig50590:138..3731-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig50590.12309.1 ID=mRNA_H-elongata_contig50590.12309.1|Name=mRNA_H-elongata_contig50590.12309.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3594bp|location=Sequence derived from alignment at H-elongata_contig50590:138..3731- (Himanthalia elongata Himel1 dioecious)
CAGGTCTTGCTGTACTACCTTGACCCCAGTCTGGCGAGCAAGCTGGATGA
TGCCGACTTCGTGCCCGAGCTTTACGCGACGGCGTGGCTGATCACTCTTT
TTAGCAGGTGGGGTCATGAAAATATTATGACTGATGCCGGAGAGGGTCGA
CGAAGATGACCGCGTAAGGGGTGATGGTGTTTCTCGAAGAGTTGCATCGC
TCAGTAGCGCAGTGCTCGTAAAAGCGTTCAAATGACGCCCTCGCTCTCTT
CCTTCTCCCGGAGAAGGGGAAATCCCCCCCCCTCCGCACATCCCACTTTC
CTCGTTGAACTCTTCTCGAACTACCAGTGGGTTGGAAATATCTTACAAGA
AATACCGAGACTTGAAAAAATGGCACGTTCTAACGCTTCGAATCACGTAA
AGATAAGGAGGCGGGGGCGTTCTCTTTTATCGTTTATTTATTTTATCCTT
CCGTCGGTTCCCTATCGGGAGGCCGACGACGTGTTGCTGCGTACTTGGAT
TATTGGCTAGTATTTAATAGTGGCTATTACCGGCTAATATCGGATATTCG
AGTTATTTCCGGGTAAGAGTAGAAGCGAAGTATTACAGATCAAACGACAG
GGGATGGCTTTTTCATGTCGGGGTTGATAGGAGGGTTGCTGTGTCAATGA
GGAGGCTCGCTGCGGTGGGCTACGGTGGTGTCTCGTCCGCATAGCTATGC
CAAGCCCTGGTTGATTAAAATGCGTTAATCCTTGTGGTAGAGATACTGCG
GTTATCGATAGTGGCTATCTATAGTCATGCCGTTAGTTTTGTTGGTAACT
ACCGGTAGAGGAGAGACACTGCGAGTTTCGATGTGCGAATTATGGTCTTA
GAAGGTGCCTCTGTGGTGCCTCTATCCTTCGAAGTCATCACCTCCGATAC
TGTCTGTACCTTAACCTTATCGTACATGTCTACTGTACCAATAGTTGTGT
GGGAAAATGAGGAATCAGCTTCCTCATGCTGATCAGCATATTATATTTTG
TCTAAGCCTAATTACATTTTAGCCCCTAATAGATTACATTTCTTTATTTA
TACACTAGAAACATAATCATTAACATAATTATTATTACAATTTTTATTGC
TTATTCTTACCTCCTGCCTTTAGCCCCTTCCCTCTTATAATTTCATAGCT
CACGTACCAATGAACTTACTATGACTTATCATGTGTGAAGAATTTGTACT
CAAGGTTAGTATTGTACACATTCGAACCTAGCGATAGTTGGTCCCCTGGA
CTTCACCTCTCATGGTGCTAAGAAGGCGTGGAGGTTCGGAGGGTTGGAAT
GAGTTTAAGGTTTTTAAAATAGAATATAAACTCGCAATAAAAAATAGGCT
GCATCCGTCGCAATTACTAATGCTACCTTGAGGACGACTACTAGCCCGGT
GCCGGCGGACTCTCGGTGGTGAACGCCCTCGGTACGCAGCTGGGTGACCT
GATAAACTCGGGATTGACCTTACCGATGGCGGTTTACGGTAAAGATAGAT
AAACACCGTCGCGAAAGGCAAGAGGAACGAGAGGATCCCGGGAGTAAGCA
CCAGATTCAGTCTTTGTTACGAAAATGAACCTGGTTGTCTGGTGCTGACG
CGAGACGGAACGACGAAACCTGTCTCTCGAGACCAAATTCTCAAGCACGA
TCTGGGACAGGAAAAACGAATTTCCCCTGTCCAGCTGACCACGAGCAGGA
GTGGCATCCATATTCGTTTGATCCATACTATACTACATATAATATGCGAT
GGCGTCATGACCACACATATTTATATAAACGCCTACGGTACACGTCCTAT
ACCGGCCTTGAGACGTATCTACACATGTTCTCCGCGATTGGTCCCGGGAT
ACCCCCTGCCTGCAGGAACCTGTCTCTGGACCTGGTGATGAGGCTGTGGG
ACGTTTATCTCGCCGTCAACGATTCGTCCCTGGTGTTTTTCCTGCTCTCC
GCGCTACTGGTCAGGAACAGGTAACAGTAACGATATACTGTGGACAGTTG
AGGGCAGTAGGACACAGCGCAACTCATTGTAGTGCAGACGAGGTAGCTCT
TAGTGGCGCGCGATTTTTTCCCCGTTTTTCTCAGCAGGGAGAGCGCTTCT
TGGTACCGTTCAAGCATGCGCCGGATGAGACATTCAGCGAAAGGAGGCAA
TCGGGGGGGGGGAGTGTTCGAAATATATCCCCGAGTTCACGGGGAGGTGG
TTCAAATATAGTCCCACTTTTGTGTTTGGGTGTTATCCACTACTTGGTGT
CATGGTCTAGTTTGGTAACGGTATGCTCCGAAGATTATTGATGATCACTT
GTGTCGGATCGATGGGTGGAGGGTCTTTAGTTTGGCTTTTCTAAGCACGA
TGTCTCATGTAGAGCAGACCACAAGGGGTGTTTTGACCTTTTACGGCACT
AAATAGCCTTAGGCTGACAACCATTGCCATTGCGAAAGAAACGAGAAACA
AAACAGAGACGATTGCGTTTCCCGAGTCTGTCTCCAGGATTGTTTAGATG
CCACCCCCCTCACCCAGGGGACACATATGTAACACACACCCCCGCGTGCT
TCTTCGGGGGCGTCGGGGGCTAATCCCCATTTCGCAAGGAGATATTTTCC
TCCGGACTTCATGACCCTCTTCGATGTCGCGCCTCTCGACACGCGGACAT
GGCTTTCGTTGTCGTGGCTGCGATAAGGAAAAGCCTTTCGACATCCGCTG
TACGGTGTATCTTTTATTGTTTATCTCCCATGTCTTGCCTCCCGTCTCCT
CTCGTCTGGTCTTACGCCCGACACGCCTAGGGACGCAATCATGAGTGTCG
AGCAGGCGCACATGATGCCGGAAACGGTTCAGGGGCTCACGATCACGGAC
AAGCAGGTGCGATACGGCTTTCTCACATCCATATAAGCCCCTCCCCGCCC
CGATCGCGGGATGCATAAGCCAGTTGGCTGTACGCATCGATCACCGTCTC
CCGCGATGATCAAATATTGCTGTTGGGGACGAAGGTCTATATCCCCGCTG
ACATAATCCCCCTCCCCTCCCCCGCCTCCTTACAGCTCCATCTCCTGTTG
AGGACATTGCGTACGTTTTTAAAAATTGGTATCAGGAAAAAAACATGATG
AAATAATTCCAAGGCTGGAATTTGTCAAATATATTCTTTTCAAAATTCGC
CGCCCAGCCGGTGTAGCCCTCTCTCGAAAAAATTAGAATGACCGCAGGGA
GGGAGAGTGCGTACAGTACTACTTTTAGTACATTATTTTCTGGGGGGTTT
TGTCGTCGGGATGTGTTAATAAAGGGAAAATGCTGAAGCTTGAGGCTCGT
TTCTTTTGAGGTGGTTGTTAACCCCTAGAGTGTTACCCCCCGCCTGGCGT
TTTCCGTGTTTGCTTTTTCCCGAGGATGCCGCCGAATATCTTTGTGAAAC
CCTACGAGCGGGCTTGCGTGTGTCGGTACTCACGGTCGCGTTGACAGGAC
CTCGAAGAGCTGATCGTTCAGGCGCGACAGATGTTGAAGAAGATCCCGGA
AACTTTCTTACGGACCGTTCGTAGCTGCTGCAGCGACCACGGCAACATAC
CCCTCGATACGTCGCGCTCTCTGTTCTGCGAGTCCGTCAGGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig50590:138..3731-

>mRNA_H-elongata_contig50590.12309.1 ID=mRNA_H-elongata_contig50590.12309.1|Name=mRNA_H-elongata_contig50590.12309.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=870bp|location=Sequence derived from alignment at H-elongata_contig50590:138..3731- (Himanthalia elongata Himel1 dioecious)
CAGGTCTTGCTGTACTACCTTGACCCCAGTCTGGCGAGCAAGCTGGATGA
TGCCGACTTCGTGCCCGAGCTTTACGCGACGGCGTGGCTGATCACTCTTT
TTAGCAGCAGGTCTTGCTGTACTACCTTGACCCCAGTCTGGCGAGCAAGC
TGGATGATGCCGACTTCGTGCCCGAGCTTTACGCGACGGCGTGGCTGATC
ACTCTTTTTAGCAGGAACCTGTCTCTGGACCTGGTGATGAGGCTGTGGGA
CGTTTATCTCGCCGTCAACGATTCGTCCCTGGTGTTTTTCCTGCTCTCCG
CGCTACTGGTCAGGAACAGGAACCTGTCTCTGGACCTGGTGATGAGGCTG
TGGGACGTTTATCTCGCCGTCAACGATTCGTCCCTGGTGTTTTTCCTGCT
CTCCGCGCTACTGGTCAGGAACAGGGACGCAATCATGAGTGTCGAGCAGG
CGCACATGATGCCGGAAACGGTTCAGGGGCTCACGATCACGGACAAGCAG
GGACGCAATCATGAGTGTCGAGCAGGCGCACATGATGCCGGAAACGGTTC
AGGGGCTCACGATCACGGACAAGCAGGACCTCGAAGAGCTGATCGTTCAG
GCGCGACAGATGTTGAAGAAGATCCCGGAAACTTTCTTACGGACCGTTCG
TAGCTGCTGCAGCGACCACGGCAACATACCCCTCGATACGTCGCGCTCTC
TGTTCTGCGAGTCCGTCAGGTGAGACCTCGAAGAGCTGATCGTTCAGGCG
CGACAGATGTTGAAGAAGATCCCGGAAACTTTCTTACGGACCGTTCGTAG
CTGCTGCAGCGACCACGGCAACATACCCCTCGATACGTCGCGCTCTCTGT
TCTGCGAGTCCGTCAGGTGA
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