prot_H-elongata_contig5059.12308.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5059.12308.1
Unique Nameprot_H-elongata_contig5059.12308.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length182
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5059.12308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 93..110
score: 30.0
coord: 47..68
score: 33.64
coord: 2..18
score: 23.53
coord: 23..35
score: 44.62
coord: 115..140
score: 36.15
coord: 74..90
score: 40.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5059contigH-elongata_contig5059:10358..10903 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5059.12308.1mRNA_H-elongata_contig5059.12308.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5059 10358..10905 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5059.12308.1 ID=prot_H-elongata_contig5059.12308.1|Name=mRNA_H-elongata_contig5059.12308.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=182bp
LPDSSRGIPGPFRGIPGPLPDIPAPPLGTPCIPGPPLGIPDRPPRIPGPR
APTPVCLASISVPLPCIPGSGGIPTLPGIPGPLTVIPGPPWGIPRSFPGI
PRPLPGIPRPIPDIPPPFPGIPRPPPGTPGPLPGIPMCPLIRGVIPLRPI
GPGGAKPPWCTPPGPLPAVMDMRFDPHTPGEL
back to top