prot_H-elongata_contig50540.12301.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig50540.12301.1
Unique Nameprot_H-elongata_contig50540.12301.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length193
Homology
BLAST of mRNA_H-elongata_contig50540.12301.1 vs. uniprot
Match: A0A6H5J6G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6G6_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 1.350e-107
Identity = 160/188 (85.11%), Postives = 170/188 (90.43%), Query Frame = 0
Query:    6 IWAHNLQMRRQISLLTVSLNASIRSVSWYTGKDMILVGTAGNELFEFNATSGDNVHEEGNPLQRGHAAKELWGLSCNSSAPEFCTVGEDKQLRIWDIYSKRNLRSNTLEMPSRAVAYSPDGDKIAVGFGMPIKENSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGLRLAMGAADGKVYVY 193
            IW HNLQ R Q++LLT SLN SIRSVSW+T  D ILVGTAGNELFEFNATSGDN+HEEG PL RGHAA ELWGLSC+ SAPEFCTVGEDKQLRIWDIYSKR +R + +EMPSRAVAYSPDG KIAVGFGMPI+E+SKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSG  LAMGAADGKVYVY
Sbjct:  229 IWGHNLQPRHQLNLLTSSLNPSIRSVSWHTSNDKILVGTAGNELFEFNATSGDNLHEEGKPLLRGHAANELWGLSCHPSAPEFCTVGEDKQLRIWDIYSKRPMRCHEVEMPSRAVAYSPDGSKIAVGFGMPIRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGAADGKVYVY 416          
BLAST of mRNA_H-elongata_contig50540.12301.1 vs. uniprot
Match: D8LE32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE32_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 5.260e-104
Identity = 160/193 (82.90%), Postives = 173/193 (89.64%), Query Frame = 0
Query:    1 DNCLQIWAHNLQMRRQISLLTVSLNASIRSVSWYTGKDMILVGTAGNELFEFNATSGDNVHEEGNPLQRGHAAKELWGLSCNSSAPEFCTVGEDKQLRIWDIYSKRNLRSNTLEMPSRAVAYSPDGDKIAVGFGMPIKENSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGLRLAMGAADGKVYVY 193
            D  ++IW HNLQ R Q++LLT SLN SIRSVSW+T  D +LVGTAGNELFEFNATSGDN+HEEG PL RGHAA ELWGLSC+ SAPEFCTVGEDKQLRIWDIYSKR +R + +EMPSRAVAYSPDG KIAVGFGMPI+E+SKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSG  LAMGAADGKVYVY
Sbjct: 1039 DGYVKIWGHNLQPRHQLNLLTSSLNPSIRSVSWHTSNDKVLVGTAGNELFEFNATSGDNLHEEGKPLLRGHAAHELWGLSCHPSAPEFCTVGEDKQLRIWDIYSKRPMRCHEVEMPSRAVAYSPDGSKIAVGFGMPIRESSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGQSLAMGAADGKVYVY 1231          
BLAST of mRNA_H-elongata_contig50540.12301.1 vs. uniprot
Match: F0YLX5_AURAN (HELP domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLX5_AURAN)

HSP 1 Score: 207 bits (527), Expect = 5.480e-60
Identity = 97/197 (49.24%), Postives = 136/197 (69.04%), Query Frame = 0
Query:    1 DNCLQIWAHNLQMRRQISL-LTVSLNASIRSVSWYTGKDMILVGTAGNELFEFNATSGDNVHEEGNPLQR---GHAAKELWGLSCNSSAPEFCTVGEDKQLRIWDIYSKRNLRSNTLEMPSRAVAYSPDGDKIAVGFGMPIKENSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGLRLAMGAADGKVYVY 193
            D  +++W   L+M+ ++ L L  SL  S RSV W   +  ILVGT G EL+E +   G N+H EG  L     GH   ELW L+C+ + P+FC+ G+DK LR+W ++ KR +R N LEM SRA AYSPDG ++AVGFG P+K+ +KQFDGK++++  DDF ++H ARDSQK IT++K+APSG  LA+G+ D ++YVY
Sbjct:  289 DGLVKLWTMQLEMKLEVDLTLLGSLAPSARSVEWDNERGRILVGTVGAELWEVDTAEGKNLHPEGPVLFGHFGGHYGGELWALACHPTLPQFCSAGDDKMLRVWSLFEKRMVRCNQLEMMSRACAYSPDGKQVAVGFGAPVKQTAKQFDGKFVIMNADDFAIVHEARDSQKWITELKYAPSGELLAVGSFDNRIYVY 485          
BLAST of mRNA_H-elongata_contig50540.12301.1 vs. uniprot
Match: A0A7S2C9J2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C9J2_9STRA)

HSP 1 Score: 177 bits (450), Expect = 8.870e-51
Identity = 87/188 (46.28%), Postives = 122/188 (64.89%), Query Frame = 0
Query:    1 DNCLQIWAHNLQMRRQISLLTV-SLNASIRSVSWYTGKDMILVGTAGNELFEFNATSGDNVHEEGNPLQRGH--AAKELWGLSCNSSAPEFCTVGEDKQLRIWDIYSKRNLRSNTLEMPSRAVAYSPDGDKIAVGFGMPIKENSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGLRLAMGA 185
            D  ++IW   L++R  I +    SL  ++RSV+W    + ILVGT G E+FE NA+ G NVH  G P+ +GH  AA EL  LS + + P + T G+D  LR+WD  +        LEMP R +AYSP GD+IA+G+G PIK +SKQFDGKW++L  + F ++H A+DSQK++T+ KW P+G  LA G+
Sbjct:  223 DGLVKIWTTTLEVRLVIDMAHHDSLAPTVRSVTWDNETNRILVGTLGAEIFELNASDGANVHGSG-PVNQGHSHAAAELHALSAHPTQPLYATAGDDATLRVWDAGAHTVHAMTALEMPCRCIAYSPTGDRIAIGYGSPIKVSSKQFDGKWVILNAETFDIMHEAKDSQKYLTECKWTPNGSLLAFGS 409          
BLAST of mRNA_H-elongata_contig50540.12301.1 vs. uniprot
Match: A0A8J2SIX3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIX3_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.150e-47
Identity = 85/197 (43.15%), Postives = 126/197 (63.96%), Query Frame = 0
Query:    1 DNCLQIWAHNLQMRRQISL-LTVSLNASIRSVSWYTGKDMILVGTAGNELFEFNATSGDNVHEEGNPLQR---GHAAKELWGLSCNSSAPEFCTVGEDKQLRIWDIYSKRNLRSNTLEMPSRAVAYSPDGDKIAVGFGMPIKENSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGLRLAMGAADGKVYVY 193
            D  +++W   L+    + L L  SL+A +R+V W + +  + VGT G E++E +AT G ++H  G        GH   ELW L  + + P+F T G+D+ LRIW ++ +R +R   LEM +RA+AY P+G + AVGFG P+   +KQFDGK +++  DDF V+H ARDSQKHIT++K+AP G  LA G+ D ++YVY
Sbjct: 1269 DGLVKLWNLQLECILDVDLALLGSLDAHVRAVDWDSDRGRVAVGTRGAEVWELDATEGRSLHAGGALCCGHFGGHFGGELWALDAHPTLPQFATAGDDRMLRIWSLFDRRQVRCAQLEMMARALAYDPEGQRFAVGFGAPVPTATKQFDGKIVIMSADDFAVVHEARDSQKHITELKYAPGGDLLAAGSHDHRMYVY 1465          
BLAST of mRNA_H-elongata_contig50540.12301.1 vs. uniprot
Match: A0A7S3JVR1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVR1_9STRA)

HSP 1 Score: 172 bits (436), Expect = 3.450e-46
Identity = 89/205 (43.41%), Postives = 133/205 (64.88%), Query Frame = 0
Query:    1 DNCLQIW-AHNLQMRRQISLLTV-SLNASIRSVSWYTGKDMILVGTAGNELFEFNATSGDNVHEEGNPLQRGHAAKELWGLSCNSSAPEFCTVGEDKQLRIWDIYSKRNLRSNTLEMPSRAVAYSPDGDKIAVGFG-----MPIKENS-----KQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGLRLAMGAADGKVYVY 193
            D  +++W + NL+ R +I L  + +L+A  ++V+W   +  + V T  +E++EF+A+ G NV      +  GH   ELWGLS + + P+F T G+D  LRIW I+ KR +R +TLEM +RA AYSPDG ++A+G+G     + +KE S     KQF+GK  +L  DDF VLH  RDS K IT+IK++PSG  LA+G+AD ++Y+Y
Sbjct: 1307 DGFVRLWNSSNLEPRLEIDLRNLGALDACAQAVTWDEKRSRVAVATMSSEIWEFDASDGSNVGGGNGAVLHGHYGGELWGLSVHPTLPQFATCGDDAMLRIWSIFEKRQVRFHTLEMSARACAYSPDGLRLAIGYGAAKSNISLKEASSGATKKQFEGKLAILDLDDFSVLHETRDSHKWITEIKYSPSGELLAVGSADTRIYMY 1511          
BLAST of mRNA_H-elongata_contig50540.12301.1 vs. uniprot
Match: A0A5A8CSV6_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CSV6_CAFRO)

HSP 1 Score: 164 bits (414), Expect = 3.120e-43
Identity = 81/196 (41.33%), Postives = 119/196 (60.71%), Query Frame = 0
Query:    1 DNCLQIWAHNLQMRRQISLLTV-SLNASIRSVSWYTGKDMILVGTAGNELFEFNATSGDNVHEE--GNPLQRGHAAKELWGLSCNSSAPEFCTVGEDKQLRIWDIYSKRNLRSNTLEMPSRAVAYSPDGDKIAVGFGMPIKENSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGLRLAMGAADGKVYVY 193
            D  +++W+ NL+   +I +    SL A++RSV W   +  ILVGT G ELFE  A  G N HE+  G PL +GH   E+WGL+ +    E+CTVG+D  LR+WD           LE  +RAVAYSPDG  +AVG G  +     + DG+W+V+  +D++V+H A D++  ITD+K+ P+G  L + A DG++ +Y
Sbjct: 1462 DGFVRLWSANLEPLSEIRMADHGSLVAAVRSVDWDPARGRILVGTRGCELFEVVAADGRNAHEDAGGGPLVQGHGRHEVWGLAAHPERAEYCTVGDDGTLRVWDASGPGQAAVAALEGVARAVAYSPDGRFVAVGLGGDVGRGRTREDGRWVVVSTEDWEVVHRAHDTRAAITDVKFCPAGATLGVAARDGRLLLY 1657          
BLAST of mRNA_H-elongata_contig50540.12301.1 vs. uniprot
Match: A0A7S1CBA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBA4_9STRA)

HSP 1 Score: 160 bits (404), Expect = 8.020e-43
Identity = 74/194 (38.14%), Postives = 124/194 (63.92%), Query Frame = 0
Query:    1 DNCLQIWAHNLQMRRQISLLTV-SLNASIRSVSWYTGKDMILVGTAGNELFEFNATSGDNVHEEGNPLQRGHAAKELWGLSCNSSAPEFCTVGEDKQLRIWDIYSKRNLRSNTLEMPSRAVAYSPDGDKIAVGFGMPIKENSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGLRLAMGAADGKVYVY 193
            D  ++IW H+L+ +    + T  S+  SIRSV W      +L+GT G+E++E +A+ G ++H +G PL +GH   ELWGL+ + +  ++ T G+D+ LR+WDI  +R  +   +   +RAVA+SPDGD+IAVG G  +    +   GKW++L+  D + L   +DS + I+D+K++P+G  LA+G+ D K+++Y
Sbjct:  360 DGKVRIWTHSLEPKNVFDIATFGSVRPSIRSVCWDPSTSRLLIGTIGSEIWEISASDGTSIHADG-PLVQGHFKHELWGLAMHPTERKYITAGDDQTLRVWDIAQRRMTQMTDVGCLTRAVAFSPDGDRIAVGLGGSVGRGKQAAAGKWLMLRTRDLEQLSETKDSSQWISDVKFSPNGKVLAVGSHDNKIFLY 552          
BLAST of mRNA_H-elongata_contig50540.12301.1 vs. uniprot
Match: A0A7S3H5Z2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H5Z2_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.210e-42
Identity = 66/119 (55.46%), Postives = 88/119 (73.95%), Query Frame = 0
Query:   75 ELWGLSCNSSAPEFCTVGEDKQLRIWDIYSKRNLRSNTLEMPSRAVAYSPDGDKIAVGFGMPIKENSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGLRLAMGAADGKVYVY 193
            ELWGL+ N    EFCTVG+D  LR+WD+ +  ++ S  LEMP+R  A+SPDG  +A+GFG P K +++QFDGKWIV+   DFQV H ARDS K +TDIK++P+G  +AMG+ D K+YVY
Sbjct:    4 ELWGLAVNPVKEEFCTVGDDCFLRVWDLVTHASVASIVLEMPARCCAFSPDGKSLAIGFGSPRKLSNRQFDGKWIVMDVSDFQVSHEARDSTKWLTDIKYSPNGEIIAMGSFDNKIYVY 122          
BLAST of mRNA_H-elongata_contig50540.12301.1 vs. uniprot
Match: A0A2R5G5S9_9STRA (Echinoderm microtubule-associated protein-like 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5S9_9STRA)

HSP 1 Score: 157 bits (396), Expect = 8.120e-41
Identity = 76/193 (39.38%), Postives = 125/193 (64.77%), Query Frame = 0
Query:    1 DNCLQIWAHNLQMRRQISLLTVSLNASIRSVSWYTGKDMILVGTAGNELFEFNATSGDNVHEEGNPLQRGHAAKELWGLSCNSSAPEFCTVGEDKQLRIWDIYSKRNLRSNTLEMPSRAVAYSPDGDKIAVGFGMPIKENSKQFDGKWIVLQEDDFQVLHAARDSQKHITDIKWAPSGLRLAMGAADGKVYVY 193
            D  +++W   L+M+ Q  + +  L+ SIRSV W   ++ I+V     E+ E +A  G +++  G P+ +GH   ELWGL+ + + PE+CTVG+D+ +R+WD+ + + L+S  L+  +RAV YSPDG KIA+G G  + +  ++ DG ++VL E D  ++H  R+S++ ITDIK++P G  LA+G+ D  VY+Y
Sbjct: 1286 DGFVRMWTPGLEMKAQFEV-SQGLH-SIRSVCWSPEENRIVVANRACEIVEISAADGTDLNN-GVPVIQGHYKHELWGLAMHPTKPEYCTVGDDQMVRVWDVATHKMLKSVKLDTMARAVTYSPDGSKIAIGLGARVGKGRQKKDGSFVVLNEKDLVMVHEGRNSKQWITDIKYSPDGATLAVGSYDNSVYLY 1475          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50540.12301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J6G6_9PHAE1.350e-10785.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE32_ECTSI5.260e-10482.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0YLX5_AURAN5.480e-6049.24HELP domain-containing protein n=1 Tax=Aureococcus... [more]
A0A7S2C9J2_9STRA8.870e-5146.28Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A8J2SIX3_9STRA1.150e-4743.15Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3JVR1_9STRA3.450e-4643.41Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A5A8CSV6_CAFRO3.120e-4341.33Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A7S1CBA4_9STRA8.020e-4338.14Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3H5Z2_9STRA2.210e-4255.46Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A2R5G5S9_9STRA8.120e-4139.38Echinoderm microtubule-associated protein-like 1 n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPFAMPF00400WD40coord: 69..101
e-value: 0.11
score: 13.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 162..193
score: 8.537
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 62..193
e-value: 4.5E-22
score: 80.3
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 1..193
NoneNo IPR availablePANTHERPTHR13720:SF33ECHINODERM MICROTUBULE-ASSOCIATED PROTEIN-LIKE 6coord: 1..193
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 162..193
score: 8.597
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50540contigH-elongata_contig50540:2553..3891 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50540.12301.1mRNA_H-elongata_contig50540.12301.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig50540 2553..3891 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig50540.12301.1 ID=prot_H-elongata_contig50540.12301.1|Name=mRNA_H-elongata_contig50540.12301.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=193bp
DNCLQIWAHNLQMRRQISLLTVSLNASIRSVSWYTGKDMILVGTAGNELF
EFNATSGDNVHEEGNPLQRGHAAKELWGLSCNSSAPEFCTVGEDKQLRIW
DIYSKRNLRSNTLEMPSRAVAYSPDGDKIAVGFGMPIKENSKQFDGKWIV
LQEDDFQVLHAARDSQKHITDIKWAPSGLRLAMGAADGKVYVY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf