mRNA_H-elongata_contig50314.12264.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig50314.12264.1
Unique NamemRNA_H-elongata_contig50314.12264.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: D7FVN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVN9_ECTSI)

HSP 1 Score: 372 bits (955), Expect = 2.190e-123
Identity = 178/223 (79.82%), Postives = 198/223 (88.79%), Query Frame = 1
Query:    1 VLIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRISTPVYKGRNPLSHAEIEAEYGSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFRLV 669
            VLIYDLAK+HLVE+LKYPP L  MEYD DFAIMGLTVDMDKGLL KLSYINRIS PVY+GR  LS  EIEAEYGSYP  V P YRR  LKPLNDRFCLAE CLLADV++++Q++AG +AFHPRAVVEDVL AVTHVHVSG +H+ VL DIGR+IQPS+RLEHML+TLK+AGKKLFISSNSPW+FVNAGMEHMLGP W +LF+F+GV ASKPLFYTGSRPFRLV
Sbjct:  180 VLIYDLAKEHLVEELKYPPSLMEMEYDPDFAIMGLTVDMDKGLLFKLSYINRISMPVYRGRTALSREEIEAEYGSYPKMVSPGYRRKQLKPLNDRFCLAEGCLLADVMEHLQAAAGKKAFHPRAVVEDVLAAVTHVHVSGKMHEAVLGDIGRFIQPSYRLEHMLRTLKDAGKKLFISSNSPWRFVNAGMEHMLGPTWNDLFDFIGVGASKPLFYTGSRPFRLV 402          
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: K3WPG0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPG0_GLOUD)

HSP 1 Score: 200 bits (508), Expect = 4.750e-58
Identity = 103/224 (45.98%), Postives = 154/224 (68.75%), Query Frame = 1
Query:    4 LIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRIS-TPVYKGRNPLSHAEIEAEY-GSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFRLV 669
            LIY +A+++LV  L+YP G++ ++YD  FAI GLT+D +KGLLCK+S   ++S + V++GR  LS  EI   Y GS   +V   +R N ++PLND F LA ACL ADVVQY+  +     + P A+VEDV  A++ VHVSG++H  V  D+ +YI+P+  L  +L+ ++ +GKK+FI +NS + +++AG+++M+G +W ELF+ V V A KP FYT  R FRL+
Sbjct:  110 LIYSMAREYLVNKLRYPEGISVLQYDPSFAIRGLTIDTEKGLLCKISSHQKLSISSVFRGRQRLSRDEIMKLYEGSRHVSV--HHRDNKMEPLNDLFSLAHACLFADVVQYLLEA--DIEYEPIAIVEDVRDAISQVHVSGMMHKAVAQDLEKYIEPNPMLLPLLERIRKSGKKMFICTNSSFPYIDAGLKYMIGDDWRELFDVVAVSARKPNFYTRHRAFRLL 329          
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: A0A5D6XYX2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYX2_9STRA)

HSP 1 Score: 197 bits (500), Expect = 6.500e-57
Identity = 104/223 (46.64%), Postives = 150/223 (67.26%), Query Frame = 1
Query:    4 LIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRIS-TPVYKGRNPLSHAEIEAEYGSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFRLV 669
            LIY +A+ +LV  L+YP G+A +++D  FAI GLT+D +KGLLCK+S   ++S T VY+GR  L+  EI   YG     V   +R + ++PLND F +A ACL ADVVQY+  +     + P AVVEDV  A+T VHVSG +H  V  D+ RYI+P+  L  +L+ L+++GKK+F+ +NS +++++AG+  M+G +W +LFE V V A KP FYT  R FRL+
Sbjct:   81 LIYAMARDYLVNKLRYPAGVAVLQFDPSFAIRGLTIDSEKGLLCKISSHQKLSYTGVYRGRQRLTREEIMELYGG-SRHVPIHHRDHKMEPLNDLFSVAHACLFADVVQYLIDN--DIEYEPIAVVEDVHAAITQVHVSGNMHKAVAQDLPRYIEPNPALLPLLERLRSSGKKMFVCTNSTFQYIDAGLRFMIGGDWRQLFEVVIVSARKPDFYTRHRDFRLL 300          
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: H3HDU7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HDU7_PHYRM)

HSP 1 Score: 194 bits (493), Expect = 7.320e-56
Identity = 101/221 (45.70%), Postives = 146/221 (66.06%), Query Frame = 1
Query:    4 LIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRIS-TPVYKGRNPLSHAEIEAEYGSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFR 663
            LIY +A+ +LV  L+YP G++ ++YD  FAI GLT+D  KGLLCK+S   ++S T V++GR  LS  EI   YG     +    R  +++PLND F +A ACL ADVVQY+        + P A+VEDV +A+ +VH+SG +H  V  D+ +YI+PS  L  +L+ ++N+GKK F+ +NS + ++NAG+++MLG +W ELF+ V V A KP FYT  R FR
Sbjct:   96 LIYSMARDYLVGKLRYPEGVSVLQYDPSFAIRGLTIDKQKGLLCKISSHQKLSNTAVFRGRQRLSRDEIIELYGG-SRHISVSDRDYNMEPLNDLFSVAHACLFADVVQYMMDR--DIEYEPVALVEDVNQAIANVHLSGDMHKEVALDLPKYIEPSPTLRPLLERIRNSGKKTFLCTNSSFAYINAGLKYMLGDDWRELFDVVIVSARKPKFYTRQRSFR 313          
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: A0A8K1CNG8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNG8_PYTOL)

HSP 1 Score: 195 bits (495), Expect = 7.750e-56
Identity = 97/223 (43.50%), Postives = 144/223 (64.57%), Query Frame = 1
Query:    4 LIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRIS-TPVYKGRNPLSHAEIEAEYGSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFRLV 669
            LIYD+A+ +L+   +YP G+  + YD  FAI GLT+D +KGLLCK+S   ++S T VY+GR  LS  EI  EY      +   YR NS++PLND F +A ACL ADV+Q++        + P A+VEDV  A+  VH+SG +H  V  D+ +Y++P   L  +L+ ++  GKK+F+ +NS +++++AG++ M+G +W +LF  V V A KP FYT  R FRL+
Sbjct:  117 LIYDMARDYLIHKFRYPSGIEQLRYDPTFAIRGLTIDKEKGLLCKISSHQKLSYTGVYRGRQRLSRDEIMEEYNG-SRHISVAYRDNSMEPLNDLFSVAHACLFADVMQFLMDE--DIEYEPIAIVEDVNAAIAQVHLSGRMHKAVAQDLAKYLEPKPTLLPLLERIRRNGKKMFLCTNSSFQYIDAGLKFMIGDDWRDLFNVVLVSARKPNFYTRQRSFRLL 336          
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: K8YVS7_NANGC (5-nucleotidase domain-containing n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YVS7_NANGC)

HSP 1 Score: 189 bits (481), Expect = 1.220e-55
Identity = 105/225 (46.67%), Postives = 143/225 (63.56%), Query Frame = 1
Query:    4 LIYDLAKQHLVEDLKYPPGLASME-YDKDFAIMGLTVDMDKGLLCKLSYINRIST-PVYKGRNPLSHAEIEAEYGSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPR-AVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFRLV 669
            LIY +AK +L+E   YP  + +   YD  FA+ GL VD+D+G + KLSYI++I+   V+ GR  LS  E+ A YG     V PQYR N +KPL D F L+EACL+ADV+ Y+         H R AVVEDVL+A++HVH SG +H  V+ D   Y+ PS  L   L   ++ GKKLF+ SNS +++V+ G++ +LG +W E F+ V V A KP FYT +RPFR V
Sbjct:    4 LIYSMAKDYLIEHSGYPSEMKTRRMYDPRFAVRGLAVDVDRGWVLKLSYIHQIALRTVFCGRRRLSKEEVVAAYGD-GAHVSPQYRNNHMKPLLDLFALSEACLVADVLDYLNEL---NIHHDRQAVVEDVLQAISHVHTSGEMHKTVVRDPPTYMLPSPHLRETLMRFRDVGKKLFLCSNSNFEYVSGGLQFLLGADWQEFFDVVIVSAGKPGFYTSNRPFRQV 224          
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: W2ZUA4_PHYPR (Uncharacterized protein n=2 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2ZUA4_PHYPR)

HSP 1 Score: 192 bits (488), Expect = 3.390e-55
Identity = 98/223 (43.95%), Postives = 149/223 (66.82%), Query Frame = 1
Query:    4 LIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRIS-TPVYKGRNPLSHAEIEAEYGSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFRLV 669
            LIY +A+ ++V  L+YP G++ ++YD  FAI GLT+D  KGLLCK+S   ++S T V++GR  LS  E+   YG     +    R  +++PLND F +A ACL ADVVQY+        + P A+VEDV +A+T+VH+SG +H  V  D+ +YI+P+  L  +L+ ++++GKK F+ +NS + ++NAG+++MLG +W ELF+ V V A KP FYT  R FR++
Sbjct:   77 LIYAMARDYMVSKLRYPEGVSVLQYDPSFAIRGLTIDKQKGLLCKISSHQKLSNTAVFRGRQRLSRDEVMELYGG-SRHISVHDRDYNMEPLNDLFSVAHACLFADVVQYMIDR--DIEYEPIALVEDVNQAITNVHLSGEMHKEVARDLPKYIEPNPALRPLLERIRDSGKKSFLCTNSSFPYINAGLKYMLGDDWRELFDVVIVSARKPKFYTRQRSFRML 296          
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: A0A2D4CIZ8_PYTIN (5'-nucleotidase domain-containing protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIZ8_PYTIN)

HSP 1 Score: 192 bits (488), Expect = 7.510e-55
Identity = 104/225 (46.22%), Postives = 153/225 (68.00%), Query Frame = 1
Query:    4 LIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRIS-TPVYKGRNPLSHAEIEAEY-GSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIE-LFEFVGVMASKPLFYTGSRPFRLV 669
            LIY +A+ +L++  +YP G+ S+ +D  FAI GLT+D +KGLLCK+S   ++  T VY+GR+ LS  EI   Y GS   ++  QYR + ++PLND F +A ACL ADVVQY+   AG   + P A+VEDV  A+T VH SG +H  V  D+ RY++PS  L   L+ ++N+GKK+F+ +NS +++++AG+ +M+G +W E LF+ V V A KP FYT +R FRL+
Sbjct:  123 LIYGMARDYLIKKYRYPGGMESLTFDPTFAIRGLTIDKEKGLLCKISSHQKLCYTGVYRGRHRLSREEIMHLYEGSRHISI--QYRDHKMEPLNDLFSVAHACLFADVVQYL-IDAGIE-YEPIAIVEDVHAAITQVHTSGHMHKAVAKDLPRYVEPSPMLLPFLERIRNSGKKMFLCTNSSFQYIDAGLRYMIGDDWREVLFDVVLVSARKPKFYTRNRSFRLL 343          
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: A0A2D4CCU9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCU9_PYTIN)

HSP 1 Score: 197 bits (500), Expect = 9.170e-55
Identity = 104/224 (46.43%), Postives = 153/224 (68.30%), Query Frame = 1
Query:    4 LIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRIS-TPVYKGRNPLSHAEIEAEY-GSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFRLV 669
            LIY +A+ +L++  +YP G+ S+ +D  FAI GLT+D +KGLLCK+S   ++  T VY+GR+ LS  EI   Y GS   ++  QYR + ++PLND F +A ACL ADVVQY+   AG   + P A+VEDV  A+T VH SG +H  V  D+ RY++PS  L   L+ ++N+GKK+F+ +NS +++++AG+ +M+G +W ELF+ V V A KP FYT +R FRL+
Sbjct:  123 LIYGMARDYLIKKYRYPGGMESLTFDPTFAIRGLTIDKEKGLLCKISSHQKLCYTGVYRGRHRLSREEIMHLYEGSRHISI--QYRDHKMEPLNDLFSVAHACLFADVVQYL-IDAGIE-YEPIAIVEDVHAAITQVHTSGHMHKAVAKDLPRYVEPSPMLLPFLERIRNSGKKMFLCTNSSFQYIDAGLRYMIGDDWRELFDVVLVSARKPKFYTRNRSFRLL 342          
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Match: A0A6G0X941_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X941_9STRA)

HSP 1 Score: 192 bits (488), Expect = 7.630e-54
Identity = 97/222 (43.69%), Postives = 146/222 (65.77%), Query Frame = 1
Query:    4 LIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYINRIS-TPVYKGRNPLSHAEIEAEYGSYPGTVDPQYRRNSLKPLNDRFCLAEACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADIGRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIELFEFVGVMASKPLFYTGSRPFRL 666
            LIY++AK  LV  L+YP GL  +EYD  FAI GL +D +K LLCK+S   ++S T V++GR  L+  EI   Y      +   YR  ++KPL+D F +A+ACL ADV+Q+   +    A+ PRAV ED+  +++ VH SG +H  V+ D+ R+++P+ +L  +L+  +  GKKLF+ +NS +++++AG+ +M+G +W ELF+ V V A KP FYT SR FRL
Sbjct:  273 LIYNMAKDALVHKLRYPQGLLQLEYDPSFAIRGLAIDTEKALLCKISSHQKLSYTGVFRGRQRLTRQEILQAYNG-SRHIPISYRSENMKPLSDLFSVAQACLFADVIQFFVDN--QIAYEPRAVHEDIDSSISEVHTSGTMHKAVVQDLPRFMEPTKKLRVLLERFRQDGKKLFVCTNSSFRYIDAGLRYMVGNDWRELFDLVLVSAKKPDFYTRSRMFRL 491          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig50314.12264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVN9_ECTSI2.190e-12379.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
K3WPG0_GLOUD4.750e-5845.98Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XYX2_9STRA6.500e-5746.64Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
H3HDU7_PHYRM7.320e-5645.70Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A8K1CNG8_PYTOL7.750e-5643.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K8YVS7_NANGC1.220e-5546.675-nucleotidase domain-containing n=1 Tax=Nannochlo... [more]
W2ZUA4_PHYPR3.390e-5543.95Uncharacterized protein n=2 Tax=Phytophthora paras... [more]
A0A2D4CIZ8_PYTIN7.510e-5546.225'-nucleotidase domain-containing protein, putativ... [more]
A0A2D4CCU9_PYTIN9.170e-5546.43Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A6G0X941_9STRA7.630e-5443.69Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig50314contigH-elongata_contig50314:999..3747 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score375.2
Seed ortholog evalue2.2e-101
Seed eggNOG ortholog2880.D7FVN9
Preferred nameNT5DC3
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0032991,GO:0042578,GO:0043235,GO:0044237,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.5'-nucleotidase activity
EggNOG OGsKOG2469@1,KOG2470@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHAD-like domain
Ec32 orthologEc-01_006040.1
Exons6
Model size669
Cds size669
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig50314.12264.1prot_H-elongata_contig50314.12264.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig50314 999..3747 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930827.5401187-CDS-H-elongata_contig50314:998..10971622930827.5401187-CDS-H-elongata_contig50314:998..1097Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50314 999..1097 +
1691679587.6298506-CDS-H-elongata_contig50314:998..10971691679587.6298506-CDS-H-elongata_contig50314:998..1097Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50314 999..1097 +
1622930827.5560174-CDS-H-elongata_contig50314:1766..18771622930827.5560174-CDS-H-elongata_contig50314:1766..1877Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50314 1767..1877 +
1691679587.6436656-CDS-H-elongata_contig50314:1766..18771691679587.6436656-CDS-H-elongata_contig50314:1766..1877Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50314 1767..1877 +
1622930827.568054-CDS-H-elongata_contig50314:2203..23611622930827.568054-CDS-H-elongata_contig50314:2203..2361Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50314 2204..2361 +
1691679587.653794-CDS-H-elongata_contig50314:2203..23611691679587.653794-CDS-H-elongata_contig50314:2203..2361Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50314 2204..2361 +
1622930827.5798302-CDS-H-elongata_contig50314:2929..30161622930827.5798302-CDS-H-elongata_contig50314:2929..3016Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50314 2930..3016 +
1691679587.66438-CDS-H-elongata_contig50314:2929..30161691679587.66438-CDS-H-elongata_contig50314:2929..3016Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50314 2930..3016 +
1622930827.5985994-CDS-H-elongata_contig50314:3276..33471622930827.5985994-CDS-H-elongata_contig50314:3276..3347Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50314 3277..3347 +
1691679587.6748037-CDS-H-elongata_contig50314:3276..33471691679587.6748037-CDS-H-elongata_contig50314:3276..3347Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50314 3277..3347 +
1622930827.620054-CDS-H-elongata_contig50314:3604..37471622930827.620054-CDS-H-elongata_contig50314:3604..3747Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50314 3605..3747 +
1691679587.685833-CDS-H-elongata_contig50314:3604..37471691679587.685833-CDS-H-elongata_contig50314:3604..3747Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig50314 3605..3747 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig50314.12264.1

>prot_H-elongata_contig50314.12264.1 ID=prot_H-elongata_contig50314.12264.1|Name=mRNA_H-elongata_contig50314.12264.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=223bp
VLIYDLAKQHLVEDLKYPPGLASMEYDKDFAIMGLTVDMDKGLLCKLSYI
NRISTPVYKGRNPLSHAEIEAEYGSYPGTVDPQYRRNSLKPLNDRFCLAE
ACLLADVVQYIQSSAGSRAFHPRAVVEDVLKAVTHVHVSGLLHDRVLADI
GRYIQPSHRLEHMLQTLKNAGKKLFISSNSPWKFVNAGMEHMLGPNWIEL
FEFVGVMASKPLFYTGSRPFRLV
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mRNA from alignment at H-elongata_contig50314:999..3747+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig50314.12264.1 ID=mRNA_H-elongata_contig50314.12264.1|Name=mRNA_H-elongata_contig50314.12264.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2749bp|location=Sequence derived from alignment at H-elongata_contig50314:999..3747+ (Himanthalia elongata Himel1 dioecious)
GTTCTCATCTACGACCTCGCGAAGCAGCATCTGGTTGAGGATCTCAAGTA CCCTCCAGGCCTTGCTAGCATGGAATACGACAAGGACTTCGCGATTATGG TGAGTGATAAGTTAGCTGGGAGGCACCGGTACCCGTATGCTCGTGGAGAC CGTCCGCCCTCCCTGCGAGACCTCATAGTGGGCAGAAGCGCCGGCTCTGG AAATGAGGGTGGGGGGCCGGCATGATATCTGCGTGAATTTCATGGCTGAA ATTGGCAAATTCTGTCGTAAAGAGGTTTCTCGCTTTTCCGCGCTGACATC GCTGATATCGCTGATGTTGCTGATATCCGTGAAACACGGTAGTGGATAGA ATGTGATGCGTGCCGCAGCGATTTCTCATTTCAAACAATATGAAAAGGTG GTTTCGAACGTCTTCGGGCAATGGCGGTGCGGCGCGCTAACCGCTCTCCT CCCCGCATTAACGCTTAGTCAAGGGTATGATGTAGAGTACGTCTTTCGCT GCAGCTTGTATAGCGCGAGCTTTCTCGTGTGCGCTATCCACTACACGGTA CGGGCGATGCGAAGCCGCAAGACTCTCATAACCGTGATGGTCGATCCTGT CTCGCACTTTTAGTATTATCGCTCGCCGATAGCCTGACGGGTCTACAAAC GATCTCTCGCGCGCTTCGACCGAGTCGCGCCCGGCCTTATTCTTGACGGT GCAACAGCTACGCAGGCACAGCCTAATTTGGGCTCGCGCGCCCGTCGCGC GTGACGTGTTTGTGACAGGGGCTGACGGTGGACATGGACAAGGGGTTGCT GTGCAAGCTGTCTTACATCAACAGGATATCGACGCCGGTGTACAAAGGAA GAAATCCGCTGAGCCACGCAGAAATAGAGGTACATCAGTACTCAAGAGCA TTCATACTAATAATAAAGGGGTCGACTCGTTGTTTGCGCTCGGTGTAAAT GAGCTTGCGACCGCGCGCGCGCGTGCTTTTGTGTTTCTTGGTACACTTTC GTGCGGGTTACGCTCTCGTTGTTAAGGGCTTCCGTTGTCGCCTCCCCTCC CCTCATCGTCCTTGCACGACTGAAATCGCAATGTTCTCAGAAGAGAAGAG TCAGTAGAGTTTTTTTTTAGATTCTCTGTACGATCTAAGGCTTCCCGTCG CATTTGCCCCGCGCGCGTTCTCTGTCGTGTCGACCGACGGATCGATTCTT CCCAGGCGGAATACGGCTCGTACCCGGGGACGGTTGACCCCCAATACCGG CGAAATTCTCTCAAGCCCCTGAACGACCGCTTCTGCCTCGCGGAGGCGTG TCTGCTGGCGGACGTGGTTCAGTACATTCAAAGTTCGGCCGGTAGCAGGG CGTTCCACCCAAGGTGCGGACACGGGTAGCCGTACGAATGTTGCTTCTTC TTTTTTAGGCTTCTTGAGCTTGCGCCAGGTGATCGCCCTCAGTGGGTGTG CGAGATAGCCGGTTGTCGGGATGCGAGTTTTTTATCACAGAGCTTTCGCC GCGTTCGATAGGCATGCCGCAGAAAGTTTCCGGCTTTTCGCGCTCGTGAA ACAACCTTTGCGCGTCCTCGCAGCACTGGGAGTTGGTAAAGCCTGGAGAT GCTCATGCAATGATGTCATCCAATATACGCAATCAAGCCGTGTGGGTAGG GTATCGATGCCGCTGTGGCATCATTTGCGTTCCATATTTTCCGTTGAAAT TAGAGCATGTTGGTGTGTTGATCTATCTATACATCTACGCTATGCTTTTG CTACTATCCACCAGCCCGAGGGGGCTCTTACCCTCGTAGCCCCTGCTGAG GGAGCTGGGTTTTCACGGCGATTAAAGCGTGCTCCTTGTCGTGCGCCCCA CTGGATATAATGATGATGGATCGTGCTGTGTCGTGCCCCGCCGCGTGCTC TTTTCTCTTATTATATCTTTCTTCCTCCTAGGGCTGTGGTAGAGGACGTG CTCAAGGCGGTTACGCACGTGCACGTCTCGGGGCTATTGCACGACAGGGT CCTGGCGGACATAGGCCGGTGCGTGCTGTGCTTCACCTGCGCGCGCGGGT TTGACCCCCAATTTTCTCTCTCTCCAAGTAGTCATGACCACCGGGCGAAG GGAGCAACGCTGGGGATCATAGTGCGCCGGGAACCGTTTATTTCTCGTCG TTTGGGACTCACACTTGTCGGCGCCAATAGTACCGCTGAAACACGCTCCC TCGACTGCGCAAACTCTACTCTTAAGTTGCCTCGTAAATGCGCGCTTCGC TTTGCCCTATATCGTGCTGTGTAAACAGATATATTCAACCTAGCCACAGG CTGGAGCACATGCTGCAGACGCTCAAGAACGCCGGGAAAAAACTTTTCAG TGAGTAGCAGCTACCGATTGAACGGCGCCCCTACTCTATCCTTACAAAAT AGGCTTCTCGCCCCCGAGACAGAACACACTCTACCAGCGTGCATGTAAAA CGTTACGAATATCGCTTCCCCTATGTAAGTGCCCCATGTATTTTCGCCCA TTTTGTATGTCGAAATATGTTGCTCAGCTTTCTCTCTCTCTATATATATA TATATATATATATCCCCCCCACCTCTTTCCTTTGCCGTCCATCACGCCTC TGAAAGTATCCTCAAACAGCCCGTGGAAATTCGTGAACGCTGGGATGGAG CACATGCTAGGCCCGAACTGGATCGAGCTGTTTGAGTTTGTCGGGGTGAT GGCGTCCAAGCCGCTCTTCTACACGGGGTCCCGACCCTTCCGCCTAGTG
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Coding sequence (CDS) from alignment at H-elongata_contig50314:999..3747+

>mRNA_H-elongata_contig50314.12264.1 ID=mRNA_H-elongata_contig50314.12264.1|Name=mRNA_H-elongata_contig50314.12264.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1338bp|location=Sequence derived from alignment at H-elongata_contig50314:999..3747+ (Himanthalia elongata Himel1 dioecious)
GTTCTCATCTACGACCTCGCGAAGCAGCATCTGGTTGAGGATCTCAAGTA
CCCTCCAGGCCTTGCTAGCATGGAATACGACAAGGACTTCGCGATTATGG
TTCTCATCTACGACCTCGCGAAGCAGCATCTGGTTGAGGATCTCAAGTAC
CCTCCAGGCCTTGCTAGCATGGAATACGACAAGGACTTCGCGATTATGGG
GCTGACGGTGGACATGGACAAGGGGTTGCTGTGCAAGCTGTCTTACATCA
ACAGGATATCGACGCCGGTGTACAAAGGAAGAAATCCGCTGAGCCACGCA
GAAATAGAGGGGCTGACGGTGGACATGGACAAGGGGTTGCTGTGCAAGCT
GTCTTACATCAACAGGATATCGACGCCGGTGTACAAAGGAAGAAATCCGC
TGAGCCACGCAGAAATAGAGGCGGAATACGGCTCGTACCCGGGGACGGTT
GACCCCCAATACCGGCGAAATTCTCTCAAGCCCCTGAACGACCGCTTCTG
CCTCGCGGAGGCGTGTCTGCTGGCGGACGTGGTTCAGTACATTCAAAGTT
CGGCCGGTAGCAGGGCGTTCCACCCAAGGCGGAATACGGCTCGTACCCGG
GGACGGTTGACCCCCAATACCGGCGAAATTCTCTCAAGCCCCTGAACGAC
CGCTTCTGCCTCGCGGAGGCGTGTCTGCTGGCGGACGTGGTTCAGTACAT
TCAAAGTTCGGCCGGTAGCAGGGCGTTCCACCCAAGGGCTGTGGTAGAGG
ACGTGCTCAAGGCGGTTACGCACGTGCACGTCTCGGGGCTATTGCACGAC
AGGGTCCTGGCGGACATAGGCCGGGCTGTGGTAGAGGACGTGCTCAAGGC
GGTTACGCACGTGCACGTCTCGGGGCTATTGCACGACAGGGTCCTGGCGG
ACATAGGCCGATATATTCAACCTAGCCACAGGCTGGAGCACATGCTGCAG
ACGCTCAAGAACGCCGGGAAAAAACTTTTCAATATATTCAACCTAGCCAC
AGGCTGGAGCACATGCTGCAGACGCTCAAGAACGCCGGGAAAAAACTTTT
CATATCCTCAAACAGCCCGTGGAAATTCGTGAACGCTGGGATGGAGCACA
TGCTAGGCCCGAACTGGATCGAGCTGTTTGAGTTTGTCGGGGTGATGGCG
TCCAAGCCGCTCTTCTACACGGGGTCCCGACCCTTCCGCCTAGTGTATCC
TCAAACAGCCCGTGGAAATTCGTGAACGCTGGGATGGAGCACATGCTAGG
CCCGAACTGGATCGAGCTGTTTGAGTTTGTCGGGGTGATGGCGTCCAAGC
CGCTCTTCTACACGGGGTCCCGACCCTTCCGCCTAGTG
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