mRNA_H-elongata_contig49563.12151.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig49563.12151.1 vs. uniprot
Match: A0A6H5J9W6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W6_9PHAE) HSP 1 Score: 185 bits (469), Expect = 1.310e-52 Identity = 118/221 (53.39%), Postives = 139/221 (62.90%), Query Frame = 1
Query: 1 KSPTSLEEGGGGGLPTLSLIALLVTFCF------LYVGAEIGFGAWIAVVVLREDLAGEAGAASMASLFWTGMMAGRLLAIPLAVRFSADCLLWANLIGAVVSSSLLLA---DDIIWTAVGAGLFGLFMASTFPLAMSLLPAAGKWYTLSAKNSSRMVIGAALGEMLVPALIAALLGPA----------DG--GRPSVLYASCMVISMFLMVLYYAWCSLI 600
+ P LE GGG P LYVG E+GFGAW+AVVVLR+DLAG+AGAA MASLFW G+ GRLLAI LAV FSA LL NL+ ++SS+LL D +W A+GA FGL MAST+PLAMSLLP AG Y LS KNSS V+G ALGEMLVPA IA LLGP+ DG GR LY +C IS+ ++ +Y WCSL+
Sbjct: 275 EQPFRLEGHEGGGKPXXXXXXXXXXXXXXXXXXXLYVGIEVGFGAWVAVVVLRDDLAGQAGAALMASLFWGGITLGRLLAIQLAVPFSAGVLLTVNLVLGLLSSTLLWVIGRDGFVWAAMGAAGFGLSMASTYPLAMSLLPEAG--YALSEKNSSHFVVGGALGEMLVPACIALLLGPSGSSGNSIGDGDGEPGRSDALYGACFAISLLMVAVYGTWCSLL 493
BLAST of mRNA_H-elongata_contig49563.12151.1 vs. uniprot
Match: D7FS47_ECTSI (Major facilitator superfamily sugar transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS47_ECTSI) HSP 1 Score: 103 bits (257), Expect = 1.860e-22 Identity = 61/109 (55.96%), Postives = 74/109 (67.89%), Query Frame = 1
Query: 310 DDIIWTAVGAGLFGLFMASTFPLAMSLLPAAGKWYTLSAKNSSRMVIGAALGEMLVPALIAALLGPA--------DG----GRPSVLYASCMVISMFLMVLYYAWCSLI 600
D +W A+GA FGL MAST+PLAMSLLP AG Y LS KNSSR V+G ALGEMLVPA IA LLGP+ DG GR + LY +C +S+ L+ +Y +WCSL+
Sbjct: 325 DGAVWAAMGAAGFGLSMASTYPLAMSLLPEAG--YALSEKNSSRFVVGGALGEMLVPACIALLLGPSSSSSNSIGDGDEEPGRSAALYGACFAVSLLLVAVYGSWCSLL 431
BLAST of mRNA_H-elongata_contig49563.12151.1 vs. uniprot
Match: A0A2E8RUD3_9BACT (MFS domain-containing protein n=5 Tax=Bacteria TaxID=2 RepID=A0A2E8RUD3_9BACT) HSP 1 Score: 95.9 bits (237), Expect = 7.180e-20 Identity = 58/165 (35.15%), Postives = 96/165 (58.18%), Query Frame = 1
Query: 7 PTSLEEGGGGGLPTLSLIALLVTFCFLYVGAEIGFGAWIAVVVLREDLAGEAGAASMASLFWTGMMAGRLLAIPLAVRFSADCLLWANLIGAVVSSSLLL----ADDIIWTAVGAGLFGLFMASTFPLAMSLLPAAGKWYTLSAKNSSRMVIGAALGEMLVPALI 489
P +E + + L+ L++T FL+V AE+ G WIA VL+ LA EA AA + +FW + GRLL+IP++ R +L +L+ ++ L++ + +IW VG G+FGL +AS FP+ +S+ K+ T+S + +S + +G ALG +++P LI
Sbjct: 195 PKVQQETTSKPIMDIYLLLLIITLFFLFVSAEVSVGGWIATYVLKSHLADEASAADLTFIFWFSLTIGRLLSIPISTRIHVKYILGVDLLLCLIGVGLIMVWPASLKVIW--VGTGIFGLGVASMFPIGISITE---KYLTVSGQITSLLFVGGALGGIVIPWLI 354
BLAST of mRNA_H-elongata_contig49563.12151.1 vs. uniprot
Match: A0A7C5E4X7_9CHLR (MFS transporter n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5E4X7_9CHLR) HSP 1 Score: 95.5 bits (236), Expect = 1.100e-19 Identity = 67/163 (41.10%), Postives = 89/163 (54.60%), Query Frame = 1
Query: 16 LEEGGGGGLPTLSLIALLVTFCFLYVGAEIGFGAWIAVVVLREDLAGEAGAASMASLFWTGMMAGRLLAIPLAVRFSADCLLWANLIGAVVSSSLLLADDIIWTAVGAGLFG--LFMASTFPLAMSLLPAAGKWYTLSAKNSSRMVIGAALGEMLVPALIAAL 498
+ +GG G L+AL+V F FLYVGAE+GFG WI L +A E AA + S FW + GRLLAIP+A R +L +LIG +VS L+L AV AG G L MAS FP +SL A + T++ + + +GA+ G M P +I L
Sbjct: 200 VSQGGPAGQVNHRLVALIVLFFFLYVGAEVGFGGWIYTFALDARVADETIAAYLTSAFWGALTVGRLLAIPIAARVRPRYILLGDLIGCLVSIGLILLWPHSLAAVWAGTLGIGLGMASVFPTTISL---AERRMTVTGQVTGWFFVGASAGAMFWPWIIGQL 359
BLAST of mRNA_H-elongata_contig49563.12151.1 vs. uniprot
Match: A0A3N5KUA6_9PROT (MFS transporter n=1 Tax=Zetaproteobacteria bacterium TaxID=2026807 RepID=A0A3N5KUA6_9PROT) HSP 1 Score: 92.4 bits (228), Expect = 1.440e-18 Identity = 64/160 (40.00%), Postives = 91/160 (56.88%), Query Frame = 1
Query: 16 LEEGGGGGLPTLSLIALLVTFCFLYVGAEIGFGAWIAVVVLREDLAGEAGAASMASLFWTGMMAGRLLAIPLAVRFSADCLLWANLIGAVVSSSLLLADDIIWTAVGAGL--FGLFMASTFPLAMSLLPAAGKWYTLSAKNSSRMVIGAALGEMLVPALI 489
+ GG L+AL+V F FLY GAEI FG WI + L+ +A AA + S FW + GRL+A+PLAVRF A +L A+ +G + S ++LL +A AG GL MAS FP A+SL A G+ ++ + + +GA+ G M++P LI
Sbjct: 199 ISTGGVASRANGRLVALIVAFFFLYTGAEIAFGGWIYSYAVALRLSSDAVAAYLTSTFWGALTLGRLVAVPLAVRFPAHTILLADCLGCLTSLAILLLGSHSLSATFAGTCGLGLSMASIFPAALSL--AQGRM-RITGQVTGWFFVGASAGGMVLPWLI 355
BLAST of mRNA_H-elongata_contig49563.12151.1 vs. uniprot
Match: A0A1F4Q6Z1_9BACT (MFS domain-containing protein n=1 Tax=candidate division NC10 bacterium RBG_16_65_8 TaxID=1801657 RepID=A0A1F4Q6Z1_9BACT) HSP 1 Score: 91.7 bits (226), Expect = 2.890e-18 Identity = 68/166 (40.96%), Postives = 95/166 (57.23%), Query Frame = 1
Query: 4 SPTSLEEGGGGGLPTLS--LIALLVTFCFLYVGAEIGFGAWIAVVVLREDLAGEAGAASMASLFWTGMMAGRLLAIPLAVRFSADCLLWANLIGAVVSSS-LLLADDIIW-TAVGAGLFGLFMASTFPLAMSLLPAAGKWYTLSAKNSSRMVIGAALGEMLVPALI 489
SP + E G ++ L+AL+V F FLY GAEI FG WI + L+ +A AA + S FW + GRLLA+PLAVRF + +L + IG + S + LLL +W T VG GL MAS FP A+SL A G+ ++ + + +GA+ G M++P LI
Sbjct: 201 SPAAPEMSTGRAADKVNGRLVALIVVFFFLYTGAEIAFGGWIYSYAVALRLSSDAVAAYLTSTFWGSLTLGRLLAVPLAVRFPSRSILLIDCIGCLTSLAILLLGSHSLWATFVGTCGVGLSMASIFPAALSL--AQGRM-RITGQVTGWFFVGASAGGMVLPWLI 363
BLAST of mRNA_H-elongata_contig49563.12151.1 vs. uniprot
Match: A0A5A9NJ29_9TELE (Sodium-dependent glucose transporter 1 n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9NJ29_9TELE) HSP 1 Score: 84.3 bits (207), Expect = 1.550e-15 Identity = 63/168 (37.50%), Postives = 98/168 (58.33%), Query Frame = 1
Query: 52 SLIALLVTFCFLYVGAEIGFGAWIAVVVLREDLAG--EAGAASMASLFWTGMMAGRLLAIPLAVRFSADCLLWANLIGAVVSSSLLLA----DDIIWTAVGAGLFGLFMASTFPLAMSLLPAAGKWYTLSAKNSSRMVIGAALGEMLVPALIAALLGPADGGRPSVLY 537
+LI LL F F YVG+E+ +G++I +D AG +A AA + SLFW GR LAI +A L+ L+G VSS LL+ D ++WT L G+ M++ FP +S + ++ T++ ++++ V+GAALGEM++PAL+A LLG +P ++Y
Sbjct: 275 TLIFLLSMFFFFYVGSEVAYGSFI--FTYAKDYAGMDQARAAGLNSLFWGTFAVGRGLAIFIAACLRPGTLILLCLVGTTVSSLLLVVFSRNDPVLWTCTA--LLGISMSTIFPSGISWVE---QYTTVTGRSAAVFVVGAALGEMVLPALVALLLGHVQN-QPLLMY 434
BLAST of mRNA_H-elongata_contig49563.12151.1 vs. uniprot
Match: UPI000784D564 (MFS transporter n=1 Tax=Anaerolinea thermolimosa TaxID=229919 RepID=UPI000784D564) HSP 1 Score: 84.0 bits (206), Expect = 1.570e-15 Identity = 59/153 (38.56%), Postives = 83/153 (54.25%), Query Frame = 1
Query: 55 LIALLVTFCFLYVGAEIGFGAWIAVVVLREDLAGEAGAASMASLFWTGMMAGRLLAIPLAVRFSADCLLWANLIGAVVSSSLLLADDIIWTAVGAGLFG--LFMASTFPLAMSLLPAAGKWYTLSAKNSSRMVIGAALGEMLVPALIAALLGP 507
L+ALLV F FLYVGAE FG W+ + L E AA + SLFW + GRLLAIP+A R +L +L G ++S ++ TA+ G G +FMAS FP ++L A + ++ K +S +GA+ G M +P +I L P
Sbjct: 213 LLALLVMFFFLYVGAESSFGGWVYTYTINMGLGTETSAAYLTSLFWGALTIGRLLAIPIASRLRPGVMLGIDLAGCLLSLGIINLFSYSPTALIIGTIGTGIFMASIFPTLINL---AQQKMQITGKITSWFFVGASSGGMFLPWIIGQLFIP 362
BLAST of mRNA_H-elongata_contig49563.12151.1 vs. uniprot
Match: A0A7C4QAR2_9CHLR (MFS transporter n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C4QAR2_9CHLR) HSP 1 Score: 84.0 bits (206), Expect = 1.990e-15 Identity = 64/164 (39.02%), Postives = 85/164 (51.83%), Query Frame = 1
Query: 34 GGLPTLSLIALLVTFCFLYVGAEIGFGAWIAVVVLREDLAGEAGAASMASLFWTGMMAGRLLAIPLAVRFSADCLLWANLIGAVVSSSLLL----ADDIIWTA-VGAGLFGLFMASTFPLAMSLLPAAGKWYTLSAKNSSRMVIGAALGEMLVPALIAALLGPA 510
GG+ L+ALL F YVGAE+GFGAW+ R LA A AA + S FW + AGRLL+IPLA R LL A L G + S + ++W A +G G MA+ FP M+ A + L+ + +S IG +LG M +P LI + PA
Sbjct: 274 GGVSRYGLVALLTACFFFYVGAEMGFGAWVYTYAERMGLADAASAAYLTSAFWGALTAGRLLSIPLAARLRPRTLLAAALSGCLASVGAAWLWPGSPALLWAAALGTGFS---MATIFPTLMAF---ASRRLALTGQITSFFFIGGSLGGMFLPWLIGQWVEPA 431
BLAST of mRNA_H-elongata_contig49563.12151.1 vs. uniprot
Match: G3NTB9_GASAC (Major facilitator superfamily domain containing 4B n=2 Tax=Gasterosteus aculeatus TaxID=69293 RepID=G3NTB9_GASAC) HSP 1 Score: 83.6 bits (205), Expect = 2.930e-15 Identity = 64/169 (37.87%), Postives = 100/169 (59.17%), Query Frame = 1
Query: 49 LSLIALLVTFCFLYVGAEIGFGAWIAVVVLREDLAG--EAGAASMASLFWTGMMAGRLLAIPLAVRFSADCLLWANLIGAVVSSSLL--LADDIIWTAVGAGLFGLFMASTFPLAMSLLPAAGKWYTLSAKNSSRMVIGAALGEMLVPALIAALLGPADGGRPSVLYAS 543
++LIALL F F YVGAE+ +G++I +D AG + AA + SLFW A R LAI A ++ +L+G+ +SS LL + + + V +GL+G MA+TFP +S + ++ TL+ + ++ V+GAALGEM++PAL+ LLG +P ++Y S
Sbjct: 213 VALIALLFXFFFSYVGAEVAYGSFI--FTFAKDYAGMNPSEAAGLNSLFWAAFAACRGLAIFFAACMYPGTMILLSLVGSTLSSLLLCLFSKERVALWVCSGLYGASMATTFPSGISWVE---QYTTLTGRTAAAFVVGAALGEMVLPALVGFLLGKFHD-QPVLMYLS 375 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49563.12151.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig49563.12151.1 >prot_H-elongata_contig49563.12151.1 ID=prot_H-elongata_contig49563.12151.1|Name=mRNA_H-elongata_contig49563.12151.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=200bp KSPTSLEEGGGGGLPTLSLIALLVTFCFLYVGAEIGFGAWIAVVVLREDLback to top mRNA from alignment at H-elongata_contig49563:2336..3757- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig49563.12151.1 ID=mRNA_H-elongata_contig49563.12151.1|Name=mRNA_H-elongata_contig49563.12151.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1422bp|location=Sequence derived from alignment at H-elongata_contig49563:2336..3757- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig49563:2336..3757- >mRNA_H-elongata_contig49563.12151.1 ID=mRNA_H-elongata_contig49563.12151.1|Name=mRNA_H-elongata_contig49563.12151.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1200bp|location=Sequence derived from alignment at H-elongata_contig49563:2336..3757- (Himanthalia elongata Himel1 dioecious)back to top |