mRNA_H-elongata_contig49178.12101.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig49178.12101.1
Unique NamemRNA_H-elongata_contig49178.12101.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: A0A6H5JXF8_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF8_9PHAE)

HSP 1 Score: 482 bits (1240), Expect = 4.000e-168
Identity = 216/259 (83.40%), Postives = 241/259 (93.05%), Query Frame = 1
Query:   28 WPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKHLISGLPPDQRGDLGERFISALAAERPDLGAEEIARRALTN 804
            WPAL++WT+  L A HGDLRLHAGGLEFALKDYLRYA ES+DELPLYVFDK+FVDKCP LGR+Y VP+VF DDLFSVLG+++RPD+RWLIAGPARSGSSFHVDPNCTSAWNAT+SG+KKW+MFPPG+TPPGVHPSEDGLDLAAPVS+ EWFLNFYEECH PGR VRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLP V++FLLTQKHLISGLPPDQR DLGERF++A++ +RPDLG  EIA RA ++
Sbjct:    7 WPALEKWTRSRLSAAHGDLRLHAGGLEFALKDYLRYARESKDELPLYVFDKRFVDKCPDLGREYDVPSVFADDLFSVLGEERRPDYRWLIAGPARSGSSFHVDPNCTSAWNATVSGRKKWIMFPPGETPPGVHPSEDGLDLAAPVSITEWFLNFYEECHAPGRRVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPHVVKFLLTQKHLISGLPPDQRDDLGERFVTAMSEQRPDLGVSEIAERATSS 265          
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: D8LEI9_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI9_ECTSI)

HSP 1 Score: 480 bits (1236), Expect = 1.430e-164
Identity = 217/271 (80.07%), Postives = 243/271 (89.67%), Query Frame = 1
Query:    1 IVSCPRSLSWPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKHLISGLPPDQRGDLGERFISALAAERPDLGAEEIARRALTNAAA 813
            +V    + SWPAL++WT+  L A HGDLR+HAGGLEFALKDYLRYA ES+DELPLYVFDK+FVDKCP LGR+Y VP+VF DDLFSVLG+++RPDHRWLIAGPARSGSSFHVDPNCTSAWNAT+SG+KKW+MFPPG+TPPGVHPSEDGLDLAAPVS+ EWFLNFYEECH P R VRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLP V++FLLTQKHLISGLPPDQR DLGE F++A++ +RPDLG  EIA RA  +  A
Sbjct:  199 VVLTDAAASWPALEKWTRSRLSAAHGDLRVHAGGLEFALKDYLRYARESKDELPLYVFDKRFVDKCPDLGREYDVPSVFADDLFSVLGEERRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGRKKWIMFPPGETPPGVHPSEDGLDLAAPVSITEWFLNFYEECHAPTRRVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPHVVKFLLTQKHLISGLPPDQRDDLGESFVTAMSEQRPDLGVSEIAERATASTTA 469          
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: A0A835YQR8_9STRA (JmjC domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQR8_9STRA)

HSP 1 Score: 319 bits (818), Expect = 1.970e-102
Identity = 151/245 (61.63%), Postives = 181/245 (73.88%), Query Frame = 1
Query:   28 WPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKHLISGLPPDQRGDLGERFISALAAERP 762
            W A   W +    + HGDL +HAGG+EF L+DYL YA+ +RD++PLYVFDK+F  K P LGR + VP  F DDLF +LG++ RPD+RWLI GPARSGSSFHVDPN TSAWNA + G+KKWV+FPP   PPGVHPS DG+DL APVS+MEWFLNFY+        +  LECVVSAGEVVFVP GWWHCVLNL+++VAITQNFVSRVNL  V+ FL  +   +SGLPP  R  L   F++AL    P
Sbjct:  204 WRAHGTWGRSYFNSAHGDLSVHAGGVEFKLRDYLEYADATRDDMPLYVFDKRFAAKAPELGRAFGVPPQFADDLFGLLGEN-RPDYRWLIMGPARSGSSFHVDPNQTSAWNAVLEGRKKWVLFPPNCPPPGVHPSSDGMDLVAPVSVMEWFLNFYDAAKRQRNGM--LECVVSAGEVVFVPRGWWHCVLNLDFTVAITQNFVSRVNLAPVLSFLRRRPDNVSGLPPALRPRLHADFVAALRERAP 445          
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: A0A5B8MUQ5_9CHLO (JmjC domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MUQ5_9CHLO)

HSP 1 Score: 298 bits (764), Expect = 3.020e-94
Identity = 136/247 (55.06%), Postives = 178/247 (72.06%), Query Frame = 1
Query:   28 WPALQRWTQGELLAE--HGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKHLISGLPPDQRGDLGERFISALAAERP 762
            WPA ++W   E + +   G+  +H GG +F+++ Y  Y + + DE+PLY+FDKKF +K P L  DY+VP+ F +DLF VLG  +RPD+RWLI GPARSGSSFH DPNCTSAWNA ++G+KKW+MFPP   PPGVH SE+ L +A  VSL+EWFLNFY++  +    V P ECVV AGEV+FVP GWWH V+NLE SVA+TQNFVS  NL  V++++     L+SG P +QR  L ERF+ A+  +RP
Sbjct:  221 WPAYEKWRNREYILDAFEGET-VHVGGYQFSMEQYYEYTDNTNDEMPLYLFDKKFAEKSPKLAGDYTVPSYFAEDLFQVLGPGERPDYRWLIIGPARSGSSFHKDPNCTSAWNAVLTGRKKWIMFPPHVMPPGVHASENELHVATSVSLIEWFLNFYQQTKE--CEVAPRECVVEAGEVIFVPRGWWHLVVNLEESVALTQNFVSSANLKHVLKYI-KDAELVSGCPLEQRASLHERFVQAMKEQRP 463          
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: M4BBI9_HYAAE (JmjC domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BBI9_HYAAE)

HSP 1 Score: 296 bits (758), Expect = 9.290e-94
Identity = 133/250 (53.20%), Postives = 172/250 (68.80%), Query Frame = 1
Query:   28 WPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKHLISGLPPDQRGDLGERFISALAAERPDLGAE 777
            W A+ +WT   L    G     AGG +F L++YL YA   +D+ PL++FDKKF  K   L RDY+VP  F DD F+ LG+ +RPD+RWLI GPA+SGSSFH+DPN T+AWN  I G+KKW+MFPPGQ PPG+HPSEDG +++APVSLMEWF+ FY+ C      ++PLE +   GEV+FVP GWWH VLN+E S+A+TQNFVS  N+  V+ F   +   +SG P DQR +LG  F   LA   P+L A+
Sbjct:  148 WSAMTKWTDKYLEDVCGSTTFDAGGFQFPLEEYLNYARTLQDDQPLFIFDKKFAGKVSQLARDYTVPKYFCDDYFAFLGEARRPDYRWLIIGPAKSGSSFHIDPNATNAWNGVIRGRKKWIMFPPGQVPPGIHPSEDGSEVSAPVSLMEWFMTFYKTCQKLPAHLKPLEGICREGEVMFVPHGWWHTVLNIEESIAVTQNFVSSCNVKSVLAFFDEKPDQVSGCPIDQRQELGRLFRDVLARNVPELFAK 397          
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: A0A484EC20_BRELC (JmjC domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EC20_BRELC)

HSP 1 Score: 294 bits (752), Expect = 1.320e-92
Identity = 129/253 (50.99%), Postives = 174/253 (68.77%), Query Frame = 1
Query:   25 SWPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKHLISGLPPDQRGDLGERFISALAAERPDLGAEEI 783
            +WPA++ WT    +        +AGG +F++  YL Y    RD+ PL++FDK F  K P L  DYSVP  F +D F++LG+++RPDHRWLI GP ++GSSFH+DPN T+AWN+ I G KKW+MFPPGQ PPG+HPS+DG ++++PVSLMEWF+ FY++  +     +PLE +   GE VFVP GWWH VLN++ S+AITQNFVS  N+  V  F+  Q  L+SG P +QR  LGE F  A+A   PD+ A+ I
Sbjct:  215 NWPAMKNWTDEYFIRVCKGKTFYAGGFQFSMDKYLSYCRALRDDQPLFIFDKDFAAKVPQLANDYSVPIYFQEDYFALLGENERPDHRWLIIGPKKAGSSFHIDPNATNAWNSVIRGAKKWIMFPPGQVPPGIHPSDDGSEVSSPVSLMEWFVTFYKDVENLPSHRKPLEGICREGETVFVPHGWWHTVLNIDESIAITQNFVSSGNVRSVFEFITEQPELVSGCPREQRCKLGEMFRDAMAKSAPDMYAKVI 467          
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: A0A2G2VVE0_CAPBA (JmjC domain-containing protein n=5 Tax=Capsicum TaxID=4071 RepID=A0A2G2VVE0_CAPBA)

HSP 1 Score: 292 bits (747), Expect = 1.070e-91
Identity = 138/248 (55.65%), Postives = 180/248 (72.58%), Query Frame = 1
Query:   25 SWPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKH--LISGLPPDQRGDLGERFISALAAERP 762
            +WPAL++W +  L+ + GD+R   G +E  L+DY RYA++ R+E PLY+FD KF +K P LG+D+ VP  F +DLFSVLG+ +RPD+RW+I GPA SGSSFH+DPN TSAWNA I G KKW++FPP   PPGVHPS DG ++A+PVS+MEWF+NFY    +  +  RP+ECV  AGEV+FVP GWWH V+NLE S+AITQNFVSR NL +V+ FL       L+SG     R +L ++F SA+ A  P
Sbjct:  214 NWPALEKWNREYLIEKCGDVRFSVGPVEMKLEDYFRYADQVREERPLYLFDPKFAEKVPQLGKDFDVPIFFNEDLFSVLGN-ERPDYRWIIIGPAGSGSSFHIDPNSTSAWNAVIKGSKKWILFPPDVVPPGVHPSPDGAEVASPVSIMEWFMNFYNATKNLKK--RPIECVCKAGEVIFVPNGWWHLVINLEDSIAITQNFVSRRNLLNVLEFLKRPNACTLVSGT--SDRVNLHDKFKSAIEAYLP 456          
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: A0A3F2RLN6_9STRA (JmjC domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RLN6_9STRA)

HSP 1 Score: 294 bits (753), Expect = 2.420e-91
Identity = 129/250 (51.60%), Postives = 173/250 (69.20%), Query Frame = 1
Query:   28 WPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKHLISGLPPDQRGDLGERFISALAAERPDLGAE 777
            WPA+++WT G L      L  +AGG +FA+  Y +YA    D+ PL+VFDK+F  K P L  DY+VP  F +D F++LG++ RP++RWLI GP +SGS FH+DPN T+AWN  I G KKW+MFPPGQ PPG+HPSEDG +++APVSLMEWF+ FY+E       ++PLE +   GE +FVP GWWH VLN+E SVA+TQNFVS  N+  V++FL  +   +SG P +QR  LG  F   ++ + PDL A+
Sbjct:  291 WPAMEKWTDGYLAEVCNGLTFYAGGFQFAMDKYFKYARTLVDDQPLFVFDKEFAAKVPQLAEDYTVPKYFQEDYFALLGEENRPNYRWLIIGPKKSGSGFHIDPNATNAWNGVIRGSKKWIMFPPGQVPPGIHPSEDGSEVSAPVSLMEWFVTFYKEVQKLPAHLKPLEGICREGETMFVPHGWWHTVLNIEESVAMTQNFVSSGNVKSVLQFLTEKPDQVSGCPTEQRPKLGGMFRDVMSKQAPDLFAK 540          
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: A0A250XF21_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XF21_9CHLO)

HSP 1 Score: 291 bits (744), Expect = 4.830e-91
Identity = 138/256 (53.91%), Postives = 178/256 (69.53%), Query Frame = 1
Query:   28 WPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLT-QKHLISGLPPDQRGDLGERFISALAAERPDLGAEEIARR 792
            WPAL++W+   L        + AG  E     YL+Y + + DE+PLY FDK F  K P L  D+SVP  F DDLFSVLG++ RPD+RW+I GP+RSGSSFHVDPNCTSAWNA I+G+KKW+++PP   PPGVH S D  D+A P+SL+EWF+NFYEE    G+ V+P+ECVVS GE++FVP GWWH  +NLE  +AITQNFVSR NLP V+ +L   +  L+SG     R  L +RF++ALA   P++  E  A+R
Sbjct:  209 WPALKKWSLPYLSKVFQGKTIVAGNYEMPFDTYLKYWDSNHDEMPLYFFDKTFCIKAPQLQNDFSVPEYFSDDLFSVLGEEGRPDYRWMIMGPSRSGSSFHVDPNCTSAWNAVITGRKKWILYPPHVEPPGVHASPDRADVATPLSLVEWFMNFYEEAQ-VGK-VKPIECVVSPGELIFVPRGWWHMAINLEPGIAITQNFVSRTNLPHVLSYLKPGRSDLVSGCALHDRASLHDRFVAALAERCPEVLKELEAKR 462          
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Match: A0A1S4DJP0_TOBAC (F-box protein At5g06550-like n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1S4DJP0_TOBAC)

HSP 1 Score: 290 bits (741), Expect = 1.360e-90
Identity = 137/248 (55.24%), Postives = 179/248 (72.18%), Query Frame = 1
Query:   25 SWPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESRDELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNLEWSVAITQNFVSRVNLPDVIRFLLTQKH--LISGLPPDQRGDLGERFISALAAERP 762
            SWPAL++W +  L  E GD++   G +E  L+DY  Y++++R+E PLY+FD KF +K P LG+DY VP  F +DLFSVLG+ +RPD+RW+I GPA SGSSFH+DPN TSAWNA I G KKWV+FPP   PPGVHPS DG ++A+PVS++EWF+NFY    +  +  RP+ECV  AGEV+FVP GWWH V+NLE S+AITQNFVSR NL +V+ FL       L+SG     R +L ++F +A+ A  P
Sbjct:  231 SWPALEKWNRDYLAEECGDVKFSVGPVEMKLEDYFSYSDQAREEKPLYLFDPKFAEKVPQLGKDYDVPMYFNEDLFSVLGN-ERPDYRWIIIGPAGSGSSFHIDPNSTSAWNAVIKGSKKWVLFPPDVVPPGVHPSPDGAEVASPVSIIEWFMNFYNATKNWKK--RPIECVCKAGEVIFVPNGWWHLVINLEDSIAITQNFVSRRNLLNVLEFLKKPNACTLVSGT--SDRVNLHDKFKNAIEAYLP 473          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig49178.12101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXF8_9PHAE4.000e-16883.40JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LEI9_ECTSI1.430e-16480.07JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YQR8_9STRA1.970e-10261.63JmjC domain-containing protein (Fragment) n=1 Tax=... [more]
A0A5B8MUQ5_9CHLO3.020e-9455.06JmjC domain-containing protein n=1 Tax=Chloropicon... [more]
M4BBI9_HYAAE9.290e-9453.20JmjC domain-containing protein n=1 Tax=Hyaloperono... [more]
A0A484EC20_BRELC1.320e-9250.99JmjC domain-containing protein n=1 Tax=Bremia lact... [more]
A0A2G2VVE0_CAPBA1.070e-9155.65JmjC domain-containing protein n=5 Tax=Capsicum Ta... [more]
A0A3F2RLN6_9STRA2.420e-9151.60JmjC domain-containing protein n=3 Tax=Phytophthor... [more]
A0A250XF21_9CHLO4.830e-9153.91Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A1S4DJP0_TOBAC1.360e-9055.24F-box protein At5g06550-like n=5 Tax=Nicotiana Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig49178contigH-elongata_contig49178:761..4116 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score483.0
Seed ortholog evalue1.2e-133
Seed eggNOG ortholog2880.D8LEI9
KEGG koko:K11323
GOsGO:0000976,GO:0000987,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006325,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008213,GO:0009987,GO:0010029,GO:0010030,GO:0016043,GO:0016569,GO:0016570,GO:0016571,GO:0018193,GO:0018195,GO:0018216,GO:0019538,GO:0032259,GO:0034969,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0043565,GO:0043985,GO:0044212,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0048518,GO:0048580,GO:0048582,GO:0050789,GO:0050793,GO:0051094,GO:0051239,GO:0051240,GO:0051276,GO:0065007,GO:0071704,GO:0071840,GO:0097159,GO:1900140,GO:1901363,GO:1901564,GO:1990837,GO:2000026
EggNOG free text desc.peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine
EggNOG OGsKOG2130@1,KOG2130@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionJumonji and F-box domain protein
Ec32 orthologEc-21_004490.1
Exons5
Model size1074
Cds size1074
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig49178.12101.1prot_H-elongata_contig49178.12101.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig49178 761..4116 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930809.253654-CDS-H-elongata_contig49178:760..11721622930809.253654-CDS-H-elongata_contig49178:760..1172Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49178 761..1172 -
1691679579.5555184-CDS-H-elongata_contig49178:760..11721691679579.5555184-CDS-H-elongata_contig49178:760..1172Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49178 761..1172 -
1622930809.2709448-CDS-H-elongata_contig49178:1501..16681622930809.2709448-CDS-H-elongata_contig49178:1501..1668Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49178 1502..1668 -
1691679579.5671015-CDS-H-elongata_contig49178:1501..16681691679579.5671015-CDS-H-elongata_contig49178:1501..1668Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49178 1502..1668 -
1622930809.295327-CDS-H-elongata_contig49178:2241..24961622930809.295327-CDS-H-elongata_contig49178:2241..2496Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49178 2242..2496 -
1691679579.5760705-CDS-H-elongata_contig49178:2241..24961691679579.5760705-CDS-H-elongata_contig49178:2241..2496Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49178 2242..2496 -
1622930809.3270648-CDS-H-elongata_contig49178:3536..36561622930809.3270648-CDS-H-elongata_contig49178:3536..3656Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49178 3537..3656 -
1691679579.584776-CDS-H-elongata_contig49178:3536..36561691679579.584776-CDS-H-elongata_contig49178:3536..3656Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49178 3537..3656 -
1622930809.3464797-CDS-H-elongata_contig49178:3996..41161622930809.3464797-CDS-H-elongata_contig49178:3996..4116Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49178 3997..4116 -
1691679579.598798-CDS-H-elongata_contig49178:3996..41161691679579.598798-CDS-H-elongata_contig49178:3996..4116Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig49178 3997..4116 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig49178.12101.1

>prot_H-elongata_contig49178.12101.1 ID=prot_H-elongata_contig49178.12101.1|Name=mRNA_H-elongata_contig49178.12101.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=358bp
IVSCPRSLSWPALQRWTQGELLAEHGDLRLHAGGLEFALKDYLRYAEESR
DELPLYVFDKKFVDKCPALGRDYSVPNVFPDDLFSVLGDDQRPDHRWLIA
GPARSGSSFHVDPNCTSAWNATISGKKKWVMFPPGQTPPGVHPSEDGLDL
AAPVSLMEWFLNFYEECHDPGRSVRPLECVVSAGEVVFVPMGWWHCVLNL
EWSVAITQNFVSRVNLPDVIRFLLTQKHLISGLPPDQRGDLGERFISALA
AERPDLGAEEIARRALTNAAAPAPIVFGAAVGKDRPEDRGFDHGAGRRRE
GDASKKQRMWVQLKQGTADVERIANGGSEGGVGVVEGSGTGVEASGSGGF
CFRFSFS*
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mRNA from alignment at H-elongata_contig49178:761..4116-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig49178.12101.1 ID=mRNA_H-elongata_contig49178.12101.1|Name=mRNA_H-elongata_contig49178.12101.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3356bp|location=Sequence derived from alignment at H-elongata_contig49178:761..4116- (Himanthalia elongata Himel1 dioecious)
ATCGTTTCTTGTCCACGCTCTCTCAGCTGGCCCGCACTTCAAAGGTGGAC CCAAGGCGAACTGCTGGCGGAGCACGGAGATCTCCGCCTGCATGCCGGAG GTCTAGAGTTTGCGCTGAAGGTGATTCTTTAATCAGCTGGCCTCTGTCGC GCCGACACCCACCAAGGCGGACACCCACCAAGGCGGTGAAGGCGGCGAAG ACGCCAACACGCCTTCCCATCGTTATCCGCCCCCGTGTACTGGCATCACC GCACCATGGTCTACTCGATCTTGCAAGCTCACCCAACGCTTCACTTCTAT AATTTTGCTCACGGCATCAAAGCATCTCTACCGCGACCGCAATGTCGTTA CAGCACTGTGGGGCGGCGGCTGCGGTGTGATCCGGGAACCATTCCCATCC GTCCCCTCCCCTCCCCTTCCTCCTCTTTTCATGATCACTTTATTTTTTTT GCCTTGGCAGGACTACCTCCGCTACGCCGAGGAGTCGAGGGACGAGCTGC CGCTCTACGTATTCGACAAAAAGTTCGTCGACAAGTGCCCCGCCCTCGGC CGCGACTACAGCGTGCCAAATGTCTTTCCGGTGGGCCGCCTATTTGTGCG CGCGCATATATAGTGTGTCTGCGTGGCACTTGCCCACCCTCTACGTTCCA TGGTACAGGACACATCCGTTTTTTGGCTCTTGAGCGTCGCCTGCGTGTGC AGGCGTTGTGATGACGTTGAGGTTAGTCTACGGAAATACCGAGGCTGATG TTGAGGTTGAGTGTTTTTCCCCCCCGTTCTTACGACCTGAATGGCCTGAG CTGTTATGAACGTGCTACCACCGCGTCACGCGGCTAGACCAACCCAGGAG GCAAAACAAGCGTGCAGCTCTTGTCTTTCGTCTTGTTCCGTTCAAAATAT CCCATTTCATCTTCATTTGCCCAAAGCCTACTATGAATACAATACGACTC TTTTGTGTATCATATTGAGAGCCCCGCGTTATGGCGCATTCACTAGGGTG GCGATGCCCCGCCCCGACGGCCTTCGTACGCCAATGACACTTTCTCTTGC CCTTTCGGAAAAGCAGTCGAACAACACCCTACCCTTGCTTGCATGGAACC GATCGCGCTGAAGTGCCGCTACTGTGTTCCGCGTCACGCTCTCTAGAAGC CGCTAACGATTGACTCTTACCACTACCGTGTTACCACCCCCCCCCTCTTT TTTCCCCCTCCCCCCCCCCAAAACCCCCCAAAGATTTCCTCTTCCCCCCC CCGTTTTCCCCCCCCCCCCCCCCCCCCCACCCCCCCTCAAATGTTGCCTG GATCTTGGTGCACTTGGTTTTCGCACTATTCCCCCCCCCTCTCAAATGTT GCCTGGATCTTGGTGCACTTGGCTTTCGCACTATATGAGTATATATCTTA CTAGCTTGTCTAAGATTAACTCTCTTTCTTTATTATTTAGTTGACGATTG ATCCCGCTACAGTTGATGGTAAGCGTTGATGATAAGCGTTGTTCTCGTTC ATCGGGTCTACGGGGATATTCATCGTGTGTGTATGTGTATGTGTGTGTGT ATATATATATATATATATATCCGATAAAGTGGTCGAAAAACTCGCCTCCG ATTTTGCACACAACTCTTAGGATGACCTGTTTTCCGTGCTGGGTGACGAT CAACGTCCGGATCACCGCTGGCTCATCGCTGGGCCAGCCCGATCGGGATC CTCCTTCCACGTCGATCCTAACTGCACGAGCGCCTGGAACGCGACGATCT CGGGCAAGAAGAAGTGGGTCATGTTCCCCCCAGGACAAACGCCTCCGGGA GTTCACCCGAGCGAAGACGGGTTGGACCTGGCGGCTCCTGTGTCCCTCAT GGAATGGTTCTTGAACTTCTACGAGGTGCCTGTAGAAGACCGCGGCTCAG CTATGGCGAATGACCATACCACCGCGGGCAGCAATTTTCGGGTTTCGGGA CTTTCCCTTGTACAGGCGATGTGATGTGTCGGGTCGTGGTCGTCGCAAGA GCAACTTTTTTTGTTTCAAAAATGGAAATATTATAATTTGGGATGAGGGG GCTGTATAGCAGAAATGAGCTGCGCTCGCGATGTTTATTTTTCTTCACCC GCTCCAAAGAGGGAAGTGCGAGCACCGCCGCACGAGCCCTGATGACGTTG AACTCGTGCAAGGCAAAATTTTTCGCCTTTCGTTCCTGAGAGATGCTGTT GGCGGAAGCTTCGCGTGAGCAGCACGCGATATTCGTCACAACTATCCCTC CTTTTCTCCCCCCCTCCTCAAAGATAATAACGACGGTGAAAAAATTGCGC CCTTAATTCGTAATGTTTTCGCCCGAGCGGACTTTTCGTCTTTCTTCATT CTCTTTCTTAATTTTTTATTTTTAACGCGCATATCCCTGGAAAAACTTAC ACTCGTGACTAATTCTTTCCCATGCGTCGCTTACCGGTTTGGCGGCAGGA GTGTCACGACCCCGGGCGGAGTGTGCGCCCGCTCGAGTGCGTCGTCTCCG CCGGAGAGGTGGTGTTCGTACCGATGGGGTGGTGGCACTGCGTCCTGAAT CTCGAGTGGTCGGTGGCAATCACGCAGAATTTCGTCAGCAGGGTGAATCT CCCGGACGTCATCAGGTCTGGTCGGTTGTGTTCCAAGTTTTAAGTTTGTC AAAGGGGGAGTGGTGGTGGTGGGGGGGCGGTTCAGAGAAGGTGTCCCCCA AAACCCCTTCGCTTCTGTAGTCGCGGACGTACAGCACCATAGCGCTCTCG CTATGAAACGTTGCGCAGTTTCGTTCGAGCTTCAAAGGGCTATTTCGCCA CGTGGTCTCTTGGGACTTACCAGGTGCGTTGTCTCTGTATATACTTGCAA TGATTTTTCGCGGCTGGGTTACGGTACCCAACTCTCCCTCTTGTCTTCTC CCGCTGTTGCCTGGCTCGCGTGTATCACCCTACGCTTTGCTCAGGTTCTT GCTCACTCAGAAACATCTCATATCCGGCTTGCCGCCTGACCAACGCGGTG ATCTAGGAGAGCGGTTCATCTCCGCTTTAGCCGCCGAGCGACCCGATCTT GGTGCCGAAGAGATAGCGCGACGCGCACTCACCAATGCCGCGGCACCCGC ACCCATCGTTTTCGGCGCCGCCGTTGGCAAGGACCGTCCGGAAGACCGGG GTTTCGACCACGGGGCAGGCCGCCGCCGAGAGGGTGATGCAAGTAAAAAG CAGCGGATGTGGGTGCAGCTCAAGCAGGGAACCGCGGATGTCGAACGGAT CGCCAATGGTGGCAGCGAAGGCGGGGTTGGTGTTGTGGAGGGGAGTGGGA CCGGGGTGGAAGCTTCAGGCAGCGGTGGTTTCTGTTTTAGGTTCTCCTTT TCTTGA
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Coding sequence (CDS) from alignment at H-elongata_contig49178:761..4116-

>mRNA_H-elongata_contig49178.12101.1 ID=mRNA_H-elongata_contig49178.12101.1|Name=mRNA_H-elongata_contig49178.12101.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2148bp|location=Sequence derived from alignment at H-elongata_contig49178:761..4116- (Himanthalia elongata Himel1 dioecious)
ATCGTTTCTTGTCCACGCTCTCTCAGCTGGCCCGCACTTCAAAGGTGGAC
CCAAGGCGAACTGCTGGCGGAGCACGGAGATCTCCGCCTGCATGCCGGAG
GTCTAGAGTTTGCGCTGAAGATCGTTTCTTGTCCACGCTCTCTCAGCTGG
CCCGCACTTCAAAGGTGGACCCAAGGCGAACTGCTGGCGGAGCACGGAGA
TCTCCGCCTGCATGCCGGAGGTCTAGAGTTTGCGCTGAAGGACTACCTCC
GCTACGCCGAGGAGTCGAGGGACGAGCTGCCGCTCTACGTATTCGACAAA
AAGTTCGTCGACAAGTGCCCCGCCCTCGGCCGCGACTACAGCGTGCCAAA
TGTCTTTCCGGACTACCTCCGCTACGCCGAGGAGTCGAGGGACGAGCTGC
CGCTCTACGTATTCGACAAAAAGTTCGTCGACAAGTGCCCCGCCCTCGGC
CGCGACTACAGCGTGCCAAATGTCTTTCCGGATGACCTGTTTTCCGTGCT
GGGTGACGATCAACGTCCGGATCACCGCTGGCTCATCGCTGGGCCAGCCC
GATCGGGATCCTCCTTCCACGTCGATCCTAACTGCACGAGCGCCTGGAAC
GCGACGATCTCGGGCAAGAAGAAGTGGGTCATGTTCCCCCCAGGACAAAC
GCCTCCGGGAGTTCACCCGAGCGAAGACGGGTTGGACCTGGCGGCTCCTG
TGTCCCTCATGGAATGGTTCTTGAACTTCTACGAGGATGACCTGTTTTCC
GTGCTGGGTGACGATCAACGTCCGGATCACCGCTGGCTCATCGCTGGGCC
AGCCCGATCGGGATCCTCCTTCCACGTCGATCCTAACTGCACGAGCGCCT
GGAACGCGACGATCTCGGGCAAGAAGAAGTGGGTCATGTTCCCCCCAGGA
CAAACGCCTCCGGGAGTTCACCCGAGCGAAGACGGGTTGGACCTGGCGGC
TCCTGTGTCCCTCATGGAATGGTTCTTGAACTTCTACGAGGAGTGTCACG
ACCCCGGGCGGAGTGTGCGCCCGCTCGAGTGCGTCGTCTCCGCCGGAGAG
GTGGTGTTCGTACCGATGGGGTGGTGGCACTGCGTCCTGAATCTCGAGTG
GTCGGTGGCAATCACGCAGAATTTCGTCAGCAGGGTGAATCTCCCGGACG
TCATCAGGAGTGTCACGACCCCGGGCGGAGTGTGCGCCCGCTCGAGTGCG
TCGTCTCCGCCGGAGAGGTGGTGTTCGTACCGATGGGGTGGTGGCACTGC
GTCCTGAATCTCGAGTGGTCGGTGGCAATCACGCAGAATTTCGTCAGCAG
GGTGAATCTCCCGGACGTCATCAGGTTCTTGCTCACTCAGAAACATCTCA
TATCCGGCTTGCCGCCTGACCAACGCGGTGATCTAGGAGAGCGGTTCATC
TCCGCTTTAGCCGCCGAGCGACCCGATCTTGGTGCCGAAGAGATAGCGCG
ACGCGCACTCACCAATGCCGCGGCACCCGCACCCATCGTTTTCGGCGCCG
CCGTTGGCAAGGACCGTCCGGAAGACCGGGGTTTCGACCACGGGGCAGGC
CGCCGCCGAGAGGGTGATGCAAGTAAAAAGCAGCGGATGTGGGTGCAGCT
CAAGCAGGGAACCGCGGATGTCGAACGGATCGCCAATGGTGGCAGCGAAG
GCGGGGTTGGTGTTGTGGAGGGGAGTGGGACCGGGGTGGAAGCTTCAGGC
AGCGGTGGTTTCTGTTTTAGGTTCTCCTTTTCTTGAGTTCTTGCTCACTC
AGAAACATCTCATATCCGGCTTGCCGCCTGACCAACGCGGTGATCTAGGA
GAGCGGTTCATCTCCGCTTTAGCCGCCGAGCGACCCGATCTTGGTGCCGA
AGAGATAGCGCGACGCGCACTCACCAATGCCGCGGCACCCGCACCCATCG
TTTTCGGCGCCGCCGTTGGCAAGGACCGTCCGGAAGACCGGGGTTTCGAC
CACGGGGCAGGCCGCCGCCGAGAGGGTGATGCAAGTAAAAAGCAGCGGAT
GTGGGTGCAGCTCAAGCAGGGAACCGCGGATGTCGAACGGATCGCCAATG
GTGGCAGCGAAGGCGGGGTTGGTGTTGTGGAGGGGAGTGGGACCGGGGTG
GAAGCTTCAGGCAGCGGTGGTTTCTGTTTTAGGTTCTCCTTTTCTTGA
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