mRNA_H-elongata_contig48607.12020.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig48607.12020.1 vs. uniprot
Match: A0A6H5JP28_9PHAE (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP28_9PHAE) HSP 1 Score: 258 bits (659), Expect = 7.650e-84 Identity = 121/143 (84.62%), Postives = 131/143 (91.61%), Query Frame = 1
Query: 223 GTSSLFPRPMIMTASKKGSEGRIKFEHEGRTVYEWEQSLEEVNLYIEAPPGLKAEQIDCTITPRHLRLGIKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWSGALQGRNAAVDPATLEGMQKKIMLERFQSE 651
G+ + P+P +MTASKKG EGRIKFEHEGRTVYEWEQSLEEVNLYIE PPG+KA++I+CTITPRH+ LG+KGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTW ALQGRN VDP TLEGMQKKIMLERFQSE
Sbjct: 73 GSRASVPQPKMMTASKKGKEGRIKFEHEGRTVYEWEQSLEEVNLYIETPPGVKADRIECTITPRHICLGLKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWPAALQGRNTQVDPMTLEGMQKKIMLERFQSE 215
BLAST of mRNA_H-elongata_contig48607.12020.1 vs. uniprot
Match: A0A835YMR3_9STRA (Nuclear movement domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMR3_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.870e-56 Identity = 87/130 (66.92%), Postives = 100/130 (76.92%), Query Frame = 1
Query: 262 ASKKGSEGRIKFEHEGRTVYEWEQSLEEVNLYIEAPPGLKAEQIDCTITPRHLRLGIKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWSGALQGRNAAVDPATLEGMQKKIMLERFQSE 651
AS KG EGRI F+H+GR +YEWEQSLEEVN+Y++ PPG+ + I C+I HL +GIKGNPPFIDEDT GPV V ESYWMM+GGELN+NLQK K TW GAL G A DP T E MQKK+MLERFQ E
Sbjct: 84 ASTKGREGRISFQHDGREIYEWEQSLEEVNIYVKPPPGVASSAIQCSIGHTHLSVGIKGNPPFIDEDTWGPVKVSESYWMMEGGELNLNLQKAVKGSTWGGALAGSGQAADPLTREEMQKKLMLERFQEE 213
BLAST of mRNA_H-elongata_contig48607.12020.1 vs. uniprot
Match: F0XX75_AURAN (CS domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX75_AURAN) HSP 1 Score: 170 bits (430), Expect = 3.750e-50 Identity = 79/134 (58.96%), Postives = 104/134 (77.61%), Query Frame = 1
Query: 253 IMTASKKGSE-GRIKFEHEGRTVYEWEQSLEEVNLYIEAPPGLKAEQIDCTITPRHLRLGIKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWSGALQGRNAAVDPATLEGMQKKIMLERFQSE 651
+ + + KGSE GR +F+HEGR +YEW+QSLE+VN+YI PPG+ + IDCTI+P HLRLG++GNPPF+DE TGGPVVV+ES+W M+ GEL V KM+K +TW GAL R VDP T + +Q+++MLERFQ E
Sbjct: 10 VGSLTPKGSEKGRYQFKHEGRVIYEWDQSLEDVNIYITPPPGVVPDMIDCTISPNHLRLGLRGNPPFLDEATGGPVVVKESHWYMNDGELTVLFAKMRKGETWDGALATRGK-VDPFTRQEIQREMMLERFQEE 142
BLAST of mRNA_H-elongata_contig48607.12020.1 vs. uniprot
Match: A0A8J2WTL1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTL1_9STRA) HSP 1 Score: 169 bits (429), Expect = 1.040e-48 Identity = 93/219 (42.47%), Postives = 137/219 (62.56%), Query Frame = 1
Query: 1 MVDYSRFNHIG-SDSDXXXXXXXRAGLQVPNEAARRTQTSATITSRDDDEMRGGKITAPPSARSGPEDAVGGASSGTSSLFPRPMIMTASKKGSE-GRIKFEHEGRTVYEWEQSLEEVNLYIEAPPGLKAEQIDCTITPRHLRLGIKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWSGALQGRNAAVDPATLEGMQKKIMLERFQSE 651
+ DYS+F+++ SD D + L T T+T+ E++GG + A +GP+ V A G S + + + KGSE GR +F+HEGR +YEW+QSLE+VN+Y++ PPG+ + IDC +TP HLRLG++GNPPF+DE TGGP+V +ES++ M GE+ V + KM+K +TW AL GR VDP T + +Q+++M+ERFQ E
Sbjct: 4 LADYSKFDNLDDSDDDAPAPAPPQQKLDPQGIPEGAQYTKPTMTN----EVKGGNVARTREA-AGPDGHVMDAKGGVRS------VGSLTPKGSEVGRYQFKHEGRLIYEWDQSLEDVNIYVKPPPGVTPDMIDCKLTPSHLRLGLRGNPPFLDEPTGGPIVAKESHFYMVDGEITVAMSKMRKGETWGTALGGRGQ-VDPFTRQEIQRELMIERFQEE 210
BLAST of mRNA_H-elongata_contig48607.12020.1 vs. uniprot
Match: A0A7S4EBP3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBP3_9STRA) HSP 1 Score: 169 bits (429), Expect = 2.010e-48 Identity = 93/219 (42.47%), Postives = 137/219 (62.56%), Query Frame = 1
Query: 1 MVDYSRFNHIG-SDSDXXXXXXXRAGLQVPNEAARRTQTSATITSRDDDEMRGGKITAPPSARSGPEDAVGGASSGTSSLFPRPMIMTASKKGSE-GRIKFEHEGRTVYEWEQSLEEVNLYIEAPPGLKAEQIDCTITPRHLRLGIKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWSGALQGRNAAVDPATLEGMQKKIMLERFQSE 651
+ DYS+F+++ SD D + L T T+T+ E++GG + A +GP+ V A G S + + + KGSE GR +F+HEGR +YEW+QSLE+VN+Y++ PPG+ + IDC +TP HLRLG++GNPPF+DE TGGP+V +ES++ M GE+ V + KM+K +TW AL GR VDP T + +Q+++M+ERFQ E
Sbjct: 60 LADYSKFDNLDDSDDDAPAPAPPQQKLDPQGIPEGAQYTKPTMTN----EVKGGNVARTREA-AGPDGHVMDAKGGVRS------VGSLTPKGSEVGRYQFKHEGRLIYEWDQSLEDVNIYVKPPPGVTPDMIDCKLTPSHLRLGLRGNPPFLDEPTGGPIVAKESHFYMVDGEITVAMSKMRKGETWGTALGGRGQ-VDPFTRQEIQRELMIERFQEE 266
BLAST of mRNA_H-elongata_contig48607.12020.1 vs. uniprot
Match: A0A482T3Y8_9ARCH (CS domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T3Y8_9ARCH) HSP 1 Score: 159 bits (402), Expect = 1.180e-45 Identity = 73/131 (55.73%), Postives = 98/131 (74.81%), Query Frame = 1
Query: 265 SKKGSEGRIKFEHEGRTVYEWEQSLEEVNLYIEAPPGLKAEQIDCTITPRHLRLGIKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWSGALQGR-NAAVDPATLEGMQKKIMLERFQSEV 654
+KKG EGR+KFEHEGRT+YEWEQ+L EV +YI+ PPG+ + +D I+P HLR+G+KG P+IDEDTGG V ES W+++ GE+ + LQK KA+ W AL+GR + +D T E ++KK+MLERFQ EV
Sbjct: 55 TKKGKEGRLKFEHEGRTIYEWEQNLTEVLIYIDMPPGVTRKMLDILISPSHLRVGVKGTSPYIDEDTGGLVKTSESTWLIEEGEIQITLQKSLKAEAWDCALKGRAGSEIDAFTKEEVKKKLMLERFQEEV 185
BLAST of mRNA_H-elongata_contig48607.12020.1 vs. uniprot
Match: A0A7R9UC51_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC51_9STRA) HSP 1 Score: 158 bits (400), Expect = 2.740e-45 Identity = 76/154 (49.35%), Postives = 108/154 (70.13%), Query Frame = 1
Query: 196 EDAVGGASSGTSSLFPRPM-IMTASKKGSEGRIKFEHEGRTVYEWEQSLEEVNLYIEAPPGLKAEQIDCTITPRHLRLGIKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWSGALQGRNAA-VDPATLEGMQKKIMLERFQSE 651
ED GA+ + P+ + + +G++GRIKFE +GRT+YEWEQ+L++V++Y+ P G++A+ I C I PR L+LG+ GNPPF+DE+TGG V +ESYWMM GEL + LQK K +TW AL+G+ +D AT + +QKK+MLERFQ E
Sbjct: 14 EDEAEGAADAQAPAAAAPVRVGRLAPRGTDGRIKFEFDGRTIYEWEQTLDDVSIYVVPPEGVQAKHISCEIQPRRLQLGLAGNPPFLDEETGGLVKADESYWMMADGELVITLQKGFKGETWDAALKGQGGEQIDVATKQEVQKKLMLERFQEE 167
BLAST of mRNA_H-elongata_contig48607.12020.1 vs. uniprot
Match: A0A7S2WQ23_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQ23_9STRA) HSP 1 Score: 156 bits (394), Expect = 5.290e-44 Identity = 70/123 (56.91%), Postives = 94/123 (76.42%), Query Frame = 1
Query: 283 GRIKFEHEGRTVYEWEQSLEEVNLYIEAPPGLKAEQIDCTITPRHLRLGIKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWSGALQGRNAAVDPATLEGMQKKIMLERFQSE 651
GR F+HEGRT+YEW+QSLEEVN++I PPG+ ++ +D I+ H+R+GIKGNPPF+DEDTGG +VV+ES+W GE+N+NLQKM+KA W ALQG+ +DP + QK++MLERF E
Sbjct: 82 GRHAFQHEGRTIYEWDQSLEEVNVWIRPPPGVTSQHLDINISYGHVRVGIKGNPPFLDEDTGGEIVVKESFWSFQDGEINLNLQKMRKAAMWPSALQGQGQ-LDPLAKQEDQKRLMLERFAEE 203
BLAST of mRNA_H-elongata_contig48607.12020.1 vs. uniprot
Match: A0A2R5GR63_9STRA (NudC domain-containing protein 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GR63_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.320e-42 Identity = 70/126 (55.56%), Postives = 89/126 (70.63%), Query Frame = 1
Query: 274 GSEGRIKFEHEGRTVYEWEQSLEEVNLYIEAPPGLKAEQIDCTITPRHLRLGIKGNPPFIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWSGALQGRNAAVDPATLEGMQKKIMLERFQSE 651
G R +FEH+GR VYEWEQ+L+EV +Y+ P G+ A+ I+C I+ HL LGIKGNPPFIDED G ES W MD GEL +NL+KM+KA TW AL+G + A+DP + +QKK+ LERFQ E
Sbjct: 2 GESKRHRFEHDGRLVYEWEQNLDEVLIYVRPPEGVTAKMIECKISKNHLTLGIKGNPPFIDEDLGDSCEAGESMWTMDDGELEINLKKMRKASTWESALKG-HGALDPVAKQEVQKKMTLERFQEE 126
BLAST of mRNA_H-elongata_contig48607.12020.1 vs. uniprot
Match: A0A067CAW0_SAPPC (CS domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CAW0_SAPPC) HSP 1 Score: 148 bits (373), Expect = 1.090e-41 Identity = 69/124 (55.65%), Postives = 91/124 (73.39%), Query Frame = 1
Query: 283 GRIKFEHEGRTVYEWEQSLEEVNLYIEAPPGLKAEQIDCTITPRHLRLGIKGNPP-FIDEDTGGPVVVEESYWMMDGGELNVNLQKMKKADTWSGALQGRNAAVDPATLEGMQKKIMLERFQSE 651
GR F+H+G+ +YEWEQSLEEVN++I+ PPG+ A + CTI+P H+ LGIKGN ++D + VVV ESYWM+DGGELN+NLQKMKK TW G + +DP T + +QKK++LERFQ E
Sbjct: 9 GRRAFKHQGQVIYEWEQSLEEVNIFIKPPPGVTASHLLCTISPSHVMLGIKGNAERYLDHELTSQVVVAESYWMLDGGELNINLQKMKKGLTWDAVFVG-HGELDPLTKDEVQKKLLLERFQQE 131 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48607.12020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig48607.12020.1 >prot_H-elongata_contig48607.12020.1 ID=prot_H-elongata_contig48607.12020.1|Name=mRNA_H-elongata_contig48607.12020.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=225bp MVDYSRFNHIGSDSDDDDDGGGRAGLQVPNEAARRTQTSATITSRDDDEMback to top mRNA from alignment at H-elongata_contig48607:317..2138- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig48607.12020.1 ID=mRNA_H-elongata_contig48607.12020.1|Name=mRNA_H-elongata_contig48607.12020.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1822bp|location=Sequence derived from alignment at H-elongata_contig48607:317..2138- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig48607:317..2138- >mRNA_H-elongata_contig48607.12020.1 ID=mRNA_H-elongata_contig48607.12020.1|Name=mRNA_H-elongata_contig48607.12020.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1350bp|location=Sequence derived from alignment at H-elongata_contig48607:317..2138- (Himanthalia elongata Himel1 dioecious)back to top |