prot_H-elongata_contig48388.11992.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48388.11992.1
Unique Nameprot_H-elongata_contig48388.11992.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length209
Homology
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BLAST of mRNA_H-elongata_contig48388.11992.1 vs. uniprot
Match: A0A6H5JP83_9PHAE (EAF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP83_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 6.260e-15
Identity = 56/137 (40.88%), Postives = 80/137 (58.39%), Query Frame = 0 
Query:   93 GSDGDSAVRLLRVLIAALNAFLGNAR------STGEHLEILDGTVAVIRRTIDNLTGDLGG-PTAGMAAAKLRGLTAMACFRRL------------RRSSVDQPQDARWAENLVRMGNRDVDKLLKCISR-QGKKDQ 209
            G+  + A RLLRVLI++ NAFL  +       ST  H+ +LD  V++ R+ I+ L+ +    P+ G AAA+LRGLTA ACF  +            +  + +Q   A  ++NL RMG +DVDKLL CIS  +GKKD+
Sbjct:  190 GTRAERATRLLRVLISSFNAFLEQSSPGSGMFSTAAHVRVLDIAVSLARKAIERLSRECSADPSVGKAAARLRGLTAAACFASVSPALDGGGEADEKSQTKEQVPAAPNSDNLDRMGKKDVDKLLVCISGGEGKKDE 326
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BLAST of mRNA_H-elongata_contig48388.11992.1 vs. uniprot
Match: D7FRR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR3_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 1.370e-10
Identity = 52/147 (35.37%), Postives = 77/147 (52.38%), Query Frame = 0 
Query:   97 DSAVRLLRVLIAALNAFLGNAR------STGEHLEILDGTVAVIRRTIDNLTGDLGG-PTAGMAAAKLRGLTAMACFRRLRRSSVDQPQDARW--------------------------AENLVRMGNRDVDKLLKCISR-QGKKDQ 209
            + A+RLLRVL+ + NAFL  +       ST  H+ +LD  V++ R+ I+ L+ +    P+ G AAA+LRGLTA ACF  +   ++D   +A                            ++NL RMG +DVDKLL C+S  + KKD+
Sbjct:  192 ERAIRLLRVLLGSFNAFLQQSSLGSGMFSTSAHVRVLDIAVSLARKAIERLSRECSADPSVGKAAARLRGLTAAACFAPVS-PALDGGGEADXXXXXXXXXXXXXXXXXXXXXXXXAPNSDNLDRMGKKDVDKLLMCVSGGEAKKDE 337
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48388.11992.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JP83_9PHAE6.260e-1540.88EAF domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FRR3_ECTSI1.370e-1035.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48388contigH-elongata_contig48388:1198..3694 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48388.11992.1mRNA_H-elongata_contig48388.11992.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48388 1198..3868 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48388.11992.1 ID=prot_H-elongata_contig48388.11992.1|Name=mRNA_H-elongata_contig48388.11992.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=209bp
MSDVDKMMAKSREALSRISRGASGERPDRASVVNGATQAARVCVSHEGAL
SEALDLVRRFCSVHLVGLKAVALVIDAESDKIGRREPGHYEGGSDGDSAV
RLLRVLIAALNAFLGNARSTGEHLEILDGTVAVIRRTIDNLTGDLGGPTA
GMAAAKLRGLTAMACFRRLRRSSVDQPQDARWAENLVRMGNRDVDKLLKC
ISRQGKKDQ
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