prot_H-elongata_contig48168.11964.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48168.11964.1
Unique Nameprot_H-elongata_contig48168.11964.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length87
Homology
BLAST of mRNA_H-elongata_contig48168.11964.1 vs. uniprot
Match: A0A6H5JEV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV9_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 2.820e-24
Identity = 54/70 (77.14%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    3 GGYDRGHGDGGRPPKKARDAKYAIPTMEEACLLRETEGKLFESNVLRLEVEELLGEVRVDYSKRTVKALE 72
            G  D G GDG  P K+ARDAKYAIPTMEEA LLRETEGKLFE N+LRLEVEELLGEVR+D+ K++VKALE
Sbjct:   66 GNADGGEGDGAPPQKRARDAKYAIPTMEEASLLRETEGKLFEGNLLRLEVEELLGEVRLDHGKKSVKALE 135          
BLAST of mRNA_H-elongata_contig48168.11964.1 vs. uniprot
Match: D7FGX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX0_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 3.850e-24
Identity = 54/70 (77.14%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    3 GGYDRGHGDGGRPPKKARDAKYAIPTMEEACLLRETEGKLFESNVLRLEVEELLGEVRVDYSKRTVKALE 72
            G  D G GDG  P K+ARDAKYAIPTMEEA LLRETEGKLFE N+LRLEVEELLGEVR+D+ K++VKALE
Sbjct:   61 GDADGGEGDGAPPQKRARDAKYAIPTMEEASLLRETEGKLFEGNLLRLEVEELLGEVRLDHGKKSVKALE 130          
BLAST of mRNA_H-elongata_contig48168.11964.1 vs. uniprot
Match: A0A316UJF3_9BASI (U3 small nucleolar RNA-associated protein 22 n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316UJF3_9BASI)

HSP 1 Score: 52.4 bits (124), Expect = 7.230e-6
Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 0
Query:   14 RPPKKARDAKYAIPTMEEACLLRETEGKLFESNVLRLEVEELLGEVRVDYSKRTVKALEVRRRRYCSCYRRFSP 87
            R   K+++A YA PT EE   LRET G+LF+SNV++L++EE+LG VR  Y K     LE+  RR  S ++   P
Sbjct:   54 RKGAKSKEALYAPPTNEEMQGLRET-GELFKSNVIKLQIEEMLGTVRPSYHK--AGPLELVLRRLHSLFQSLQP 124          
BLAST of mRNA_H-elongata_contig48168.11964.1 vs. uniprot
Match: A0A4P9W203_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W203_9FUNG)

HSP 1 Score: 49.7 bits (117), Expect = 6.200e-5
Identity = 24/49 (48.98%), Postives = 37/49 (75.51%), Query Frame = 0
Query:   17 KKARDAKYAIPTMEEACLLRETEGKLFESNVLRLEVEELLGEVRVDYSK 65
            KK  +A Y  PT +E  +L+ET   LF+SN+ +++++ELLGEVR+DY+K
Sbjct:  490 KKDGNALYRAPTSDEIHMLKETTD-LFKSNLFKMQIDELLGEVRIDYTK 537          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48168.11964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JEV9_9PHAE2.820e-2477.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGX0_ECTSI3.850e-2477.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A316UJF3_9BASI7.230e-645.95U3 small nucleolar RNA-associated protein 22 n=1 T... [more]
A0A4P9W203_9FUNG6.200e-548.98Uncharacterized protein (Fragment) n=1 Tax=Blyttio... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48168contigH-elongata_contig48168:3141..3401 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48168.11964.1mRNA_H-elongata_contig48168.11964.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48168 3141..3401 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48168.11964.1 ID=prot_H-elongata_contig48168.11964.1|Name=mRNA_H-elongata_contig48168.11964.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp
MEGGYDRGHGDGGRPPKKARDAKYAIPTMEEACLLRETEGKLFESNVLRL
EVEELLGEVRVDYSKRTVKALEVRRRRYCSCYRRFSP
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