prot_H-elongata_contig48.11936.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig48.11936.1
Unique Nameprot_H-elongata_contig48.11936.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length648
Homology
BLAST of mRNA_H-elongata_contig48.11936.1 vs. uniprot
Match: A0A6H5JBB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB0_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 1.880e-61
Identity = 126/252 (50.00%), Postives = 181/252 (71.83%), Query Frame = 0
Query:  359 QQVRGQLRARDSWGRNILIHAVLSRRLQVFDAVFYAVNEEIIGYEIEDLMGINKDDNEESIMEITLSGASKDMVRLVTRLDQQLKKTVAIREKASTIEAKIQSFIPGKSIVIFQLLLPEMNEASWALILLIFMSALAPLFSYGSSLVLKEMPSSRNNLRKSISSILMSAPAMWWWGIGTSSIAQD-SFGWSENSSSASLAVATILIPALDQFLSSHRMEKVYDELSCQRRRFARKAQLEWNREQGRLEAEVA 609
            ++VR QL+A DSWGR I  HAVL+RR +VFDAVF+A  E I+  EI  LMGINK+D  +++ME  L    + M   V R DQ+LK+ + + E+ASTIE+KIQSFIPGK IVIFQLLLPE+  +   L LLI MSA+AP  S+ + LV +E P S    R+S+ S+ +SAPAM++WG+GTS++      GW++++++A+LAVATI+IPA+D F +S ++E+ YD+ SCQR RF+++A  +W ++ G++    A
Sbjct:  380 EEVREQLKATDSWGRTIFGHAVLTRRPKVFDAVFFAAREHILDDEIAALMGINKEDKSDTVMETALQTVPRAMAARVARRDQELKRAITLEERASTIESKIQSFIPGKLIVIFQLLLPEVGSSD-KLTLLIIMSAIAPGLSWAAGLVAREKPGSTEK-RRSLVSLFLSAPAMFFWGLGTSTVGMTHGMGWNDSATAAALAVATIIIPAMDAFFNSRKVEQWYDKWSCQRWRFSQRAHAKWVKKHGKVSPAAA 629          
BLAST of mRNA_H-elongata_contig48.11936.1 vs. uniprot
Match: D7FN08_ECTSI (Kinase, NEK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN08_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 2.030e-38
Identity = 101/251 (40.24%), Postives = 154/251 (61.35%), Query Frame = 0
Query:  334 GVNTQKNELV-VFRVAWSLVKDTLWKQQVRGQLRARDSWGRNILIHAVLSRRLQVFDAVFYAVNEEIIGYEIEDLMGINKDDNEESIMEITLSGASKDMVRLVTRLDQQLKKTVAIREKASTIEAKIQSFIPGKSIVIFQLLLPEMNEASWALILLIFMSALAPLFSYGSSLVLKEMPSSRNNL--RKSISSILMSAPAMWWWGIGTSSIAQDSFGWSENSSSASLAVATILIPALDQFLSSHRMEKVYDE 581
            GVN +   +V VF+VA  LV   LW  +V  QL+A D WGR++L HA+LS    +F+A + AV + +    + ++M  N+ + E++ M   L+  + DM +L      QLKK V  R K ST++AKI+ FIPGK +V+FQLLLP++ E    LILL  M ALAPL    ++  + +  S    +  R +  S+L+ APAM++WG+GTS++ Q + GWS + S+ S+A AT+ IPA+D F +S +   + D+
Sbjct:  326 GVNKRDAVVVPVFKVAVRLVTRCLWTDEVLQQLKAVDLWGRSVLTHALLSGHEMMFEAAYGAVRDVLQDELVSEMMETNEGEREDTPMIDALARGNTDMRKLYALRAGQLKKDVDARSKLSTMDAKIEGFIPGKLVVMFQLLLPQIAEGR-QLILLYIMCALAPLVKLATTGSVDDSDSKHTGVKARSNKLSVLLGAPAMFFWGVGTSTVGQTALGWSSSLSATSMAAATLAIPAVDSFFNSRKASAIGDK 575          
BLAST of mRNA_H-elongata_contig48.11936.1 vs. uniprot
Match: D7FWX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWX2_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 1.390e-35
Identity = 94/233 (40.34%), Postives = 140/233 (60.09%), Query Frame = 0
Query:  342 LVVFRVAWSLVKDTLWKQQVRGQLRARDSWGRNILIHAVLSRRLQVFDAVFYAVNEEIIGYEIEDLM--GINKDDNEESIMEITLSGASKDMVRLVTRLDQQLKKTVAIREKASTIEAKIQSFIPGKSIVIFQLLLPEMNEAS-WALILLIFMSALAPLFSYGSSLVLKEMPSSRNNLRKSISSILMSAPAMWWWGIGTSSIAQDSFGWSENSSSASLAVATILIPALDQFLS 571
            L V + A    +  LW  + R  L ARD W R+I+ HA++S R Q+F+AVF A   ++   +I+ L+  G+     + S+     S     M +LV      LK  V  R+  ST+ AKIQ+FIPG  IVIFQLLLPE +E+    L LL+ +  +AP +S+G+++ +K  P + N           ++PAM++WG+GTS IA +SF W+E++S+A+LAVATI+IPALD + S
Sbjct:  135 LPVIQAALEFARANLWMPEYRKLLEARDGWHRSIIEHAIMSGRTQIFEAVFNAFRRDVHDEKIDLLLDPGVETSHAQTSLRRAMNSQEGTPMAQLVREKTTSLKSDVTKRKDDSTVAAKIQAFIPGNLIVIFQLLLPEFDESGDGPLYLLLVLCFIAPFWSWGAAMSVKRDPETTNT---------RASPAMFFWGVGTSKIAPNSFNWAESASAAALAVATIVIPALDTYFS 358          
BLAST of mRNA_H-elongata_contig48.11936.1 vs. uniprot
Match: A0A6H5KM21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM21_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 2.140e-35
Identity = 94/234 (40.17%), Postives = 142/234 (60.68%), Query Frame = 0
Query:  342 LVVFRVAWSLVKDTLWKQQVRGQLRARDSWGRNILIHAVLSRRLQVFDAVFYAVNEEIIGYEIEDLM--GINKDDNEESIMEITLSGASKDMVRLVTRLDQQLKKTVAIREKASTIEAKIQSFIPGKSIVIFQLLLPEMNEAS-WALILLIFMSALAPLFSYGSSLVLKEMPSSRNN-LRKSISSILMSAPAMWWWGIGTSSIAQDSFGWSENSSSASLAVATILIPALDQFLS 571
            L V +      +  LW  + R  L ARD W R+I+ HA++S R Q+F+ +F A   +I   +I+ L+  G+     + S+   T S     M +LV      LK  V+ R+  ST+ AKIQ+FIPG  IVIFQLLLPE +E+    L LL+ +  +AP +S+G ++ +K  P   N   R++ +   ++ PAM++WG+GTS IA +SF W+E++S+A+LAVATI+IPALD + S
Sbjct:  253 LPVIQAVLEFARANLWMPEYRKLLEARDGWHRSIIEHAIMSGRTQIFETIFNAFRRDIHDEKIDLLLDPGVETSHAQTSLRRATNSQEGTPMAQLVQEKTTSLKSDVSKRKDDSTVAAKIQAFIPGNLIVIFQLLLPEFDESGDGPLYLLLVLCFIAPFWSWGVAMSVKRDPEITNTRARQTAAKYFLAIPAMFFWGVGTSKIAPNSFNWAESASAAALAVATIVIPALDTYFS 486          
BLAST of mRNA_H-elongata_contig48.11936.1 vs. uniprot
Match: D7FST7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST7_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 5.010e-27
Identity = 69/128 (53.91%), Postives = 88/128 (68.75%), Query Frame = 0
Query:  342 LVVFRVAWSLVKDTLWKQQVRGQLRARDSWGRNILIHAVLSRRLQVFDAVFYAVNEEIIGYEIEDLMGINKDDNEESIMEITLSGASKDMVRLVTRLDQQLKKTVAIREKASTIEAKIQSFIPGKSIV 469
            + V + AW+LVK+      VR QL+A DSWGR I  HAVL+RR +VFDAVF+A  E I+  EI  LMGINK+D  ++IME  L    + M   V R DQ+LK+ + + E+ASTIE+KIQSFIPGK IV
Sbjct:  325 MAVLKSAWALVKE------VREQLKATDSWGRTIFGHAVLTRRPKVFDAVFFAAREYILDDEIAALMGINKEDKSDTIMETALQTVPRAMAARVARRDQELKRAITLEERASTIESKIQSFIPGKLIV 446          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig48.11936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JBB0_9PHAE1.880e-6150.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN08_ECTSI2.030e-3840.24Kinase, NEK n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FWX2_ECTSI1.390e-3540.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KM21_9PHAE2.140e-3540.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FST7_ECTSI5.010e-2753.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 594..614
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 553..570
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 571..647
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 542..552
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 522..541
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 502..521
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 481..501
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..480
NoneNo IPR availableTMHMMTMhelixcoord: 483..505
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 4..242
e-value: 8.0E-12
score: 46.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 46..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig48contigH-elongata_contig48:11264..19804 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig48.11936.1mRNA_H-elongata_contig48.11936.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig48 11202..21195 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig48.11936.1 ID=prot_H-elongata_contig48.11936.1|Name=mRNA_H-elongata_contig48.11936.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=648bp
MFMVYKLRTPLSAAAAAGEFALFKTVDHAVNRCIEQRPDLSREEHHLSQL
DMMDADGLTLAMHAARSGNVSIFEAVLDRIDRAKVSDRLLKKDYAGKTVL
MHAAGSGRAAVFVKVANSIQENFTNTELVAHLQESSDDNRTILMHAARSG
DHMALSAVVHVCRRTIEPKQLRALLEKRDVEEQIFLMHAAAGCREGTAKT
GSQMTQRQKKQSQEHSKQQEQPKQQKKHQQSGVGSNNDLSSSIPSADRRN
SAPGRQRIISESDEKTDLNRFQEEKLSESDSGDGGVALASKMSRDDSGDD
DDDKYGVDRAMMPSEARGIDDDEEAVKYSASNIGVNTQKNELVVFRVAWS
LVKDTLWKQQVRGQLRARDSWGRNILIHAVLSRRLQVFDAVFYAVNEEII
GYEIEDLMGINKDDNEESIMEITLSGASKDMVRLVTRLDQQLKKTVAIRE
KASTIEAKIQSFIPGKSIVIFQLLLPEMNEASWALILLIFMSALAPLFSY
GSSLVLKEMPSSRNNLRKSISSILMSAPAMWWWGIGTSSIAQDSFGWSEN
SSSASLAVATILIPALDQFLSSHRMEKVYDELSCQRRRFARKAQLEWNRE
QGRLEAEVAKTENEGDFRRTPKIKPQSFLDRTSNPGGGNEEHTLGER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf