prot_H-elongata_contig11490.1191.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11490.1191.1
Unique Nameprot_H-elongata_contig11490.1191.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length968
Homology
BLAST of mRNA_H-elongata_contig11490.1191.1 vs. uniprot
Match: D7FXE1_ECTSI (WD repeat-containing protein 60 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXE1_ECTSI)

HSP 1 Score: 648 bits (1672), Expect = 4.820e-212
Identity = 461/1051 (43.86%), Postives = 577/1051 (54.90%), Query Frame = 0
Query:    3 GDGYEDEGFEEYSDEFESGEADNENQPSMAVLSRATPHGETREADGARPARSPIVSPALRMRNTQD-CKAPDDEALQELRYSLREENNIARQRKNAKLVTSALEVLPTADTKDNSQV-AARGEKKGFKSSKRPATQGRAQVMDRGEFLEKAYNGNNALSSAAAATARSRNSSFELADAKALTRALAKGDPRAKRVHAIRARLRLEVESTRLFDQSPITPIDLYHRRLRAQPAVIRQVASQTNDDARSVEAQTEEVPKFDKEIQFHLGHDDTTLENLMRCLRSTRRSSFRQTPDGRSKEDEEQNGENKQ-----GGLGVEKTPPGRRKT-FNVLSNTEGNGSG---GPMKICADG-GLEYDPLVSETTA------VQQPQRLRKFLLQACVVMETLCEENLSSAADRKSPKRSGQTE-------EDREEPGNKERSLFPG--GAHAKDWEELGVNVYVASKGSPKSAAA--------------------------GINILIDSSIVVGVAFSHAKRSMLVTAHARPAWH-----GVVLTGDDVDSDKKFAASMLEGCGFVCVWNPDTSKETPMNVLFGEGVFKCVCLTLFQPHVILVGTGEGCLLLWDLREPVAISHGQEAQKLGLKCGLHSPTYTTAGGGG-GSAGFIDPA-FGHAYAIVSLVLIPTSSEDDG--AGSGDFGDISSLGESNSFQVASLDDRSTVSIWVVTESKRIDEGGSQTHLGLSPGGRIRMTLSKSLRPVAEFGDCTANRAR---------FPRLSFSSATSAGATA---ATSFAPAAAHALAFSREDPNRFLVSGTCECIAHASRLGDLPTPRSFCAPRLPFWVDRLAAAKLGGNGAGGARVATSREEERGLGGVSCLSFSPFFRRYFLAGCENGSVRLYKDDCAVPLNVWEGFSARDSDLRSNIREANDPACGGGFEGWSTSIASVAWSEHRPAVFFALDKIGTLHGFDLLEDDINPIASEQCPTQGMG----TRDAQEAVAAVTSSP-------PMLALSSNSLTTGSQPRVTLVVHGRIFTRSLSRRMCRPAES 968
            G GY+DE FEEYSDEF+ GE ++E  P    + +AT    TR           +VSPAL+MR   D  +APDD+ L+ELR SLREEN  AR+RK A+      E   TAD K +S   A RG                      GE       G  ++ ++A      + S F++ADAKALTRALAKGDPRA+RV AIR   RLEVES RLFDQ PI PIDLYHRRLR QPA+IRQ  +QTNDDARSVE QT+E+ +  KE+QFHLGHDDT LENLMR LRS RR   R    G      E+ G+ +Q     GG  V  + PG   T F  + N  G  +G   G  +  A   G ++D      ++      +  P RL KFL QA VVMETLCEENL  A      KR G +        E  +  G +  +LF G  G   + WEE+             + AA                          G   L++ S VVGV FS  KRSMLVTAHARP                  +D++ A  +LEGCG VCVWN +  +  P++VL GEG+F C+CL   Q HV++ GT EGCLLLWDLRE  +     E+++LGL CG+ +PTY TAGG G G  G +  A  GH+  +VS+V IP+ +   G   G G  G + SLG++ SFQVASLDDR TVSIW+ +E  R DEGGSQT LGLSPGGR+R+ LSK+LRP  +     A R R          PR S S+      T    A+S A  +A ALAFS EDPNRFL+  + + + HASRLG  P PR++  PR P         +L G   G     T  E E  +GGV+CL+FSPFF +YFLAGC +GSVRLY +   VPL  WE  S   +D R N         GG    W  +I+S+AWSEHRPAVFFALD +G +H FDLLEDD  P+ASE CP   +G    +R      AAV           P LALS+ +L TG +P+V L   G +F ++L+ RM R + S
Sbjct:  200 GGGYDDECFEEYSDEFD-GEGEDEGPP--PPVGKATAASVTRPGSARGEGGGAVVSPALKMRRPGDNIQAPDDKVLEELRDSLREENIAARERKVARPSPKPSEAA-TADVKSSSDAKAVRGAXXXXXXXXXXXX-----XXTGGEASAAVAKGKFSVDASADVKRSRKGSGFKMADAKALTRALAKGDPRAERVRAIRGASRLEVESVRLFDQVPILPIDLYHRRLRGQPALIRQAGTQTNDDARSVEGQTDEIVQSHKEVQFHLGHDDTALENLMRRLRSNRRPPERHQAKG------EEGGQTQQRTVVDGGEDVPASGPGSATTTFKGIYNGNGMVAGTDPGEQEYPAPRYGTDFDGSSGRVSSAGGSDTLPPPLRLGKFLRQASVVMETLCEENLLHAP----VKRRGGSHPLDPARGEHEDAVGRERGALFSGAGGREGEGWEEVXXXXXXXXXXXXXATAAATEDTGSSTAEEKRRQGGDEGRVRGRGAGALLEGSEVVGVEFSKVKRSMLVTAHARPVGRRXXXXXXXXXXXXXXTDEREA--VLEGCGVVCVWNTENVQGAPVSVLCGEGLFSCLCLARHQAHVVITGTEEGCLLLWDLRETASEGRAAESRELGLHCGIRAPTYVTAGGDGRGEDGGLSKAGCGHSSKVVSVVAIPSPTGGVGMDGGGGGIGGMISLGDACSFQVASLDDRGTVSIWLASEVPRGDEGGSQTDLGLSPGGRVRLALSKALRPGDQPSLAAAVRPRGGGGAVPVSVPRFSTSTRNRLDQTTDTTASSAAAGSARALAFSPEDPNRFLIGDSSDRVTHASRLGKPPPPRAYGPPRRP------GERRLDGXXXG-----TGEEREGAMGGVTCLAFSPFFPKYFLAGCGDGSVRLYNEASVVPLTTWEAGSTAAADSRRN---------GGSSSSWPAAISSLAWSEHRPAVFFALDVLGMVHAFDLLEDDAGPVASEGCPDASVGVMERSRSPTNPPAAVVEDASSSSLALPTLALSNETLATGRRPKVALAFGGSVFAKTLAGRMFRQSRS 1209          
BLAST of mRNA_H-elongata_contig11490.1191.1 vs. uniprot
Match: A0A835Z6D0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6D0_9STRA)

HSP 1 Score: 206 bits (523), Expect = 5.040e-51
Identity = 251/876 (28.65%), Postives = 335/876 (38.24%), Query Frame = 0
Query:  162 AAATARSRNSSFELADAKALTRALAKGDPRAKR------VHAIRARLRLEVESTRLFDQSPITPIDLYHRRLRA--------QPAVIRQVASQTNDDARSVEAQTEEVPKFDKEIQFHLGHDDTTLENLMRCLRSTRRSSFRQTPDGRSKEDEEQNGENKQGGLGVEKTPPGRRKTFNVLSNTEGNGSGGPMKICADGGLEYDPLVSETTAVQQPQRLRK---------------FLLQACVVMETLCEENLSSAADRKSPKRSGQTEEDREEPGNKERSLFPGGAHAKD----WEELGVNVYVASKGSPKSAAAG--INILIDSSIVVGVAFSHAKRSMLVTAHARPAWHGVVLTGDDVDSDKKFAASMLEGCGFVCVWNP-------DTSKETPMN----VLFGEGVFKCVCL-TLFQPHVILVGTGEGCLLLWDLREPVAISHGQEAQKLGLKCGLHSPTYTTAGGGGGSAGFIDPAFGHAYAIVSLVLIPTSSEDDGAGSGDFGDISSLGESNSFQVASLDDRSTVSIWVVTESKRIDEGGS--QTHLGLSPGGRIRMTLSKSL--RPVAEFGDCTANRARFPRLSFSSA--TSAGATAATSFA---PAAAHALAFSREDPNRFLVSGTCE-CIAHASRLGDLPTPRSFCAPRLPFWVDRLAAAKLGGNGAGGARVATSREEERGLGGVSCLSFSPFFRRYFLAGCENGSVRLYKDDCAVPLNVWEGFSARDSDLRSNIREANDPACGGGFEGWSTSIASVAWSEHRPAVFFALDKIGTLHGFDLLEDDINPIASEQCPT------------QGMGTRDAQEAVAAVTSSPPMLALSSNSLTTGSQPRVTLVVHGRIFTRSLSRRMCRPAES 968
            AA  A+     + LA+AKA+++ L     R  R        +  A  RL  E   L+  +P+ P++ YH RLR+                  QT DD R V  QTE     D E QFH+G DDT LEN++   R+            R           +QG      + PG   T          G G    +   G  E    V    A ++  +LR                FL     V+E LC EN++ +    +     + E    + G ++R+   G A A +    WE LG              A    +   +  +    +A+S A+  +L  A+AR A                           VCVW         DT    P      VL  EG   CVC      PH+ L G  +G + LWDLR P          +    CGL  PTY TA            A GHA A+                         L  + +   ASLDDR  V +W+  +    D+GGS  Q  LGL+PGG +R+  S+++  R +      TA+  R PR S  +A  TS  +   T  A   PAAA  L F   D NRFLV G     + H SRLG  P PR++C                   G+GG               V CLS S F   YFLAGC +GSVRL+  D A P+ VW+GF+      R                    ++  V WS HR AVF+ALD  G LH FDLL DD  P+ SE+C              +G   R AQ A A         ALS+  L  G+ P V +V       R LS  + R A++
Sbjct:  179 AALAAQPATQQYRLAEAKAVSQRLGGAAARGARCGXXXXARSAAAAARLSTERFVLYSAAPVGPLERYHARLRSGGXXXXXXXXXXXXXXXXQTRDDDRDVGTQTETARAADAEAQFHMGSDDTALENMLARARARXXXXXXXXXXHR-----------RQG------SDPGVTLTAXXXXXXXXTGEG--EGVYEHGDREAPGTVDAAEAEERAAQLRXXXXXXXXXGGARLAHFLRSVAPVVEALCVENIALSGGSAAL---AEAEARARDEGERDRAA--GRAFASEATTSWERLGAAXXXXXXXXXDDWAVEPWLRTALAGASAAALAYSAARPPLLAVAYARSAXXXXXXXXXXA----------------VCVWGARAAPLAGDTDASRPAAPLAAVLVAEGAPTCVCWGPAAAPHLCLAGAADGVVALWDLRTPCGGXXXXXXXERPA-CGLRRPTYATAPR--------SAAGGHASAVAXXXXXXXXXXXXXXXXXXXXXXG-LFRAAATAFASLDDRGVVIVWLAMDVT--DDGGSAQQQDLGLAPGGSVRLAHSRTVDTRALPLPPPPTASL-RQPRRSSRAAQETSVHSLCDTEGAVGGPAAA-CLCFFGRDSNRFLVGGXXXXAVLHCSRLGAQPVPRAYC-------------------GSGGXXXXXXXXXXXXXXXVLCLSASAFCPEYFLAGCADGSVRLHHQDSARPVAVWDGFAGMLGAARXXXXXXXXXXXXXXXXXXCVAVVDVRWSPHRAAVFYALDARGLLHVFDLLADDAGPLISERCCDAAAAASAEGKCGEGDDERCAQAACAC--------ALSAERLLAGAAPSVAVVGXXXXXXRLLSGWLQRSADT 973          
BLAST of mRNA_H-elongata_contig11490.1191.1 vs. uniprot
Match: A0A7S3XQJ7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQJ7_HETAK)

HSP 1 Score: 164 bits (415), Expect = 2.250e-38
Identity = 178/629 (28.30%), Postives = 256/629 (40.70%), Query Frame = 0
Query:  364 RLRKFLLQACVVMETLCEENLSSAADRKSPKRSGQTEEDREEPGNKERSLFPGGAHAKDWEELGVNVYVASKGSPKSAAAGINILIDSSIVVGVAFSHAKRSMLVTAHARPAWHGVVLTGDDVDSDKKFAASMLEGCGFVCVWNPDTSKETPMNVLFGEGVFKCVCLTLFQPHVILVGTGEGCLLLWDLREPVA--ISHGQEAQKLGLK-CG---LHSPTYTTAGGGGGSAGFIDPAF-GHAYAIVSLVLIPT---SSEDDGAGSGDFGDISSLGESNSFQVASLDDRSTVSIWVVTESKRIDEGGSQTHLGLSPGGRIRMTLSKSLRPVAEFGDCTANRARFPRLSFSSATSAGATAATSFAPA-AAHALAFSREDPNRFLVSGTCECIAHASRLGDLPTPRSFCAPRLPFWVDRLAAAKLGGNGAGGARVATSREEERGLGGVSCLSFSPFFRRYFLAGCENGSVRLYKDDCAVPLNVWEGFSARDSD---------------LRSNIREANDPACGGGFEGWSTSIASVAWSEHRPAVFFALDKIGTLHGFDLLEDDINPIASEQCPTQGMGTRDAQEAVAAVTSSPPMLALSSNSLTTGSQPRVTLVVHGRIFTRSLSRRMCRPA 966
            RL  F+  A  V E +CE+N                EED E    +++ LF     A  W+ LG      S  SP SA   I  ++    + G+ FS  + +M  +++   +        D+ D  K +        G +CVW+   + E P  +        C  + LFQ H+++ GT +G +LLWDLRE     ++ G   QK     C    + SPTYT+A         + P    H+  +V +  IP    S    G                SFQ+A+LDDR  +++W+VTE ++++ GGS + LGLS  G+ R+ LS++L       D   N+ +    S S   +A   A  S  P   A +LAF  +DPNRF+ + +   I   +R G+ P P  F AP + F     A                          V CL FSPF   YFLAGC +GSVRLY      P+  W G   R                                         + SV WS HRP VF+AL +      FDLL D   P+  E+     + + +     A      P L LSS+ +  G +PR+ L     I  R L   M RP+
Sbjct:  128 RLSTFIQAASQVCEAVCEKNFEQYKKH--------FEEDSES--KEDQGLF---TSASKWKILGQGGRRLSNTSP-SARENIGSVLAQRELTGLVFSTLQPNMACSSYMLRSKE--YFNEDETDDLKDY--------GLICVWDT-LNPEKPSRLGICRVGVSCCAMGLFQTHLVMAGTTDGQVLLWDLRENKREILAQGDPIQKTANSLCSEGVIRSPTYTSAS--------LGPHIKSHSSKVVDITPIPVEILSKPHQGPSQA------------SFQIATLDDRGVLALWLVTELEKVELGGS-SDLGLSINGQTRLVLSRTLSLDPSIEDLNPNKQK----STSGRRTAKTEADASLTPGPCAQSLAFYPKDPNRFIATLSDGSIMQHTRFGNCPPPHHFRAP-ITFGSFENAPVP-----------------------VLCLDFSPFLPDYFLAGCMDGSVRLYTIAEQFPILHWVGDCLRGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVTSVRWSAHRPGVFYALTRDTEACAFDLLRDQAGPLHWERYEAF-VSSEEKMRGDA------PRLGLSSDKVKVG-RPRLALTGGSTIAFRELGVSMTRPS 674          
BLAST of mRNA_H-elongata_contig11490.1191.1 vs. uniprot
Match: UPI001AAC4E69 (cytoplasmic dynein 2 intermediate chain 1 isoform X1 n=2 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAC4E69)

HSP 1 Score: 143 bits (360), Expect = 4.720e-31
Identity = 139/545 (25.50%), Postives = 217/545 (39.82%), Query Frame = 0
Query:  363 QRLRKFLLQACVVMETLCEENLSSAADRKSPKRSGQTEEDREEPGNKERSLFPGGAHAKDWEELGVNVYVASKGSPKSAAAGINILIDSSIVVGVAFSHAKRSMLVTAHARPAWHGVVLTGDDVDSDKKFAASMLEGCGFVCVWNPDTSKETPMNVLFGEGVFKCVCLTLFQPHVILVGTGEGCLLLWDLREPVAISHGQEAQKLGLKCGLHSPTYTTAGGGGGSAGFIDPAFGHAYAIVSLVLIPTSSEDDGAGSGDFGDISSLGESNS---FQVASLDDRSTVSIWVVTESKRIDEGGSQTHLGLSPGGRIRMTLSKSLRPVAEFGDCTANRARFPRLSFSSATSAGATAATSFAPAAAHALAFSREDPNRFLVSGTCECIAHASRLGDLPTPRSFCAPRLPFWVDRLAAAKLGGNGAGGARVATSREEERGLGGVSCLSFSPFFRRYFLAGCENGSVRLYKDDCAVPLNVWEGFSARDSDLRSNIREANDPACGGGFEGWSTSIASVAWSEHRPAVFFALDKIGTLHGFDLLEDDINPIASE 904
            QRL  FL  A  VM  L EEN S    R                 +K  S  P  + ++D   L  N+                  +    V  + FS A+R +L++ H++              S+K  +A  L     +CVWN      +P N+L  E   KC C +  +  ++  GT +G +L+WDLRE  ++      + +       S T++T G        +     H + + S+  +PT+   +   S     +SS GE  S   FQ+ASLD+   +  WVV E +++D  GSQ+ LGL PGG++++  S S+  + +F          P            T    F P          +D N F++      + H +R G +  P  + +        +L  +K                       V+ + FSPF    FLAGC +G +RL+      P+  W                 ND   G        SI ++ WS  RP +FFALD   ++H +DLL++D+ PIA E
Sbjct:  548 QRLTGFLRSAAQVMAVLLEENRSEYQSR-----------------SKVHSKEPCMSISEDCFHLNTNLP----------------FLQGRKVYHLQFSEAQRHLLLSVHSQ--------------SNKSISA-FLSDQYLICVWNI-WQPSSPQNILMCESEVKCCCFSPGKASLVFAGTVDGSVLVWDLREDFSMHQTLTIEDVTWT--FRSVTFSTDG--------VFSYVNHTHQVKSIEPVPTAEAKEPGISA----LSSQGEEVSGLSFQLASLDENGYLIFWVVVELRKVDLAGSQSDLGLIPGGKVKLVHSSSINLIDKFFHKDVLTLGSPE-----------TMNIKFLP----------QDSNHFVIGTDIGIVTHGTRYGLIEPPVQYSS-----LYSKLRPSK-----------------------VTAIDFSPFAMPAFLAGCTDGCIRLHTMSAEYPVMQW-----------------NDTTGG-------QSIIALQWSLTRPTMFFALDAASSIHIWDLLQNDLQPIAKE 956          
BLAST of mRNA_H-elongata_contig11490.1191.1 vs. uniprot
Match: UPI001301E3A4 (WD repeat-containing protein 60 isoform X3 n=1 Tax=Sarcophilus harrisii TaxID=9305 RepID=UPI001301E3A4)

HSP 1 Score: 138 bits (348), Expect = 3.990e-30
Identity = 118/450 (26.22%), Postives = 191/450 (42.44%), Query Frame = 0
Query:  460 SHAKRSMLVTAHARPAWHGVVLTGDDVDSDKKFAASMLEGCGFVCVWNPDTSKETPMNVLFGEGVFKCVCLTLFQPHVILVGTGEGCLLLWDLREPVAISHGQEAQKLGLKCGLHSPTYTTAG-----GGGGSAGFIDPAFGHAYAIVSLVLIPTSSEDDGAGSGDFGDISSLGESNSFQVASLDDRSTVSIWVVTESKRIDEGGSQTHLGLSPGGRIRMTLSKSLRPVAEFGDCTANRARFPRLSFSSATSAGATAATSFAPAAAHALAFSREDPNRFLVSGTCECIAHASRLGDLPTPRSFCAPRLPFWVDRLAAAKLGGNGAGGARVATSREEERGLGGVSCLSFSPFFRRYFLAGCENGSVRLYKDDCAVPLNVWEGFSARDSDLRSNIREANDPACGGGFEGWSTSIASVAWSEHRPAVFFALDKIGTLHGFDLLEDDINPIASE 904
            S  +R  LV+ H  P              +K F+  +L+    +CVW+      +P  VL  E    C C + F+  ++  GT  G ++LWDLRE   + H  + +         + T++T G             I+P     Y   + VL P S++++         IS L    SF +ASLD+   ++IWVV E  + D  GSQ+ LGL PGG+I++  S +++  + F          P+++            TS  P     + F   DPNRF++      I+H +R     +P+ F                              + EER +  V+ + FSPF    FLAGC +GS+RL++ +   P+  W                 ND   G        ++ ++ W++ RPAVF   D I  ++ +DLLE+D+ P+A +
Sbjct:  251 SQIQRQTLVSVHELP--------------EKPFS-DILDKRYILCVWDI-WQPSSPQKVLICESKVMCCCFSPFKAILLFAGTIHGSVVLWDLREDSRMHHYVKLKDCAWT--FRTATFSTDGVLTAVNHRSPVQSIEPVSTSVYKKQNFVLSPFSNQEE---------ISGL----SFHIASLDENGILNIWVVVELSKADFAGSQSDLGLIPGGKIKLVHSSTIQLNSSFP---------PKVN------------TSLKPMQTLIVKFLPSDPNRFIIGTDMGVISHGARHDSKVSPKLF---------------------------KPQQREERPVK-VTVIDFSPFGDPMFLAGCSDGSIRLHQLNSEYPICQW-----------------NDTTNG-------RAVIALKWTQTRPAVFLVQDDISNIYVWDLLENDLGPVAKQ 596          
BLAST of mRNA_H-elongata_contig11490.1191.1 vs. uniprot
Match: A0A6P9ARF4_PANGU (WD repeat-containing protein 60 isoform X1 n=16 Tax=Colubroidea TaxID=34989 RepID=A0A6P9ARF4_PANGU)

HSP 1 Score: 139 bits (351), Expect = 6.140e-30
Identity = 114/448 (25.45%), Postives = 193/448 (43.08%), Query Frame = 0
Query:  460 SHAKRSMLVTAHARPAWHGVVLTGDDVDSDKKFAASMLEGCGFVCVWNPDTSKETPMNVLFGEGVFKCVCLTLFQPHVILVGTGEGCLLLWDLREPVAISHGQEAQKLGLKCGLHSPTYTTAGGGGGSAGFIDPAFGHAYAIVSLVLIPTSS-EDDGAGSGDFGDISSLGE--SNSFQVASLDDRSTVSIWVVTESKRIDEGGSQTHLGLSPGGRIRMTLSKSLRPVAEFGDCTANRARFPRLSFSSATSAGATAATSFAPAAAHALAFSREDPNRFLVSGTCECIAHASRLGDLPTPRSFCAPRLPFWVDRLAAAKLGGNGAGGARVATSREEERGLGGVSCLSFSPFFRRYFLAGCENGSVRLYKDDCAVPLNVWEGFSARDSDLRSNIREANDPACGGGFEGWSTSIASVAWSEHRPAVFFALDKIGTLHGFDLLEDDINPIASE 904
            S A+R  L++ H  P       T +D+  D K+          +CVWN      +P  +L  E    C C +  +  ++  GT +G +L+WDLRE   +    +  +        SPT++T G        +  +  HA  ++++  + TS  ++   G   F  +S   E    SFQ+AS+D+  T+S+WVV E ++ D  GSQ  LGL PGG+I++  S +++      +C+ +   +  L      +                + F   +PN F+V      ++H +R  +L  P  +  P+                  GG R             V+ + FSPF +  FL GC +GS+RL++    +PL  W   +A                          ++ S+ W+  RPAVFF LD    ++ +DLLE+D++P+A +
Sbjct:  672 SQAQRQALLSVHGLPE------TSNDLSLDSKY---------IICVWNV-WQPSSPQKLLLCESQVTCCCFSPCKATLVFAGTVDGSVLVWDLREDSRMHQCVKVNETDWT--FRSPTFSTDG--------VFTSINHACTVLTIEPVSTSVFKEQNCG---FSYLSVQEEMLGLSFQIASMDENGTLSLWVVVELQKGDLSGSQNDLGLIPGGKIKLVHSSTVQL-----NCSISPKDYTFLGVPQTLN----------------IKFLPSNPNHFVVGTDAGLVSHGTR-HELKVPPKWFKPQQ-----------------GGPRATQ----------VNAIDFSPFGKPIFLVGCSDGSIRLHQMASELPLMQWNNSTA------------------------GQAVISLQWALTRPAVFFVLDATSVIYIWDLLENDLSPVAKQ 1017          
BLAST of mRNA_H-elongata_contig11490.1191.1 vs. uniprot
Match: G3WJI9_SARHA (Dynein 2 intermediate chain 1 n=2 Tax=Sarcophilus harrisii TaxID=9305 RepID=G3WJI9_SARHA)

HSP 1 Score: 138 bits (348), Expect = 1.400e-29
Identity = 118/450 (26.22%), Postives = 191/450 (42.44%), Query Frame = 0
Query:  460 SHAKRSMLVTAHARPAWHGVVLTGDDVDSDKKFAASMLEGCGFVCVWNPDTSKETPMNVLFGEGVFKCVCLTLFQPHVILVGTGEGCLLLWDLREPVAISHGQEAQKLGLKCGLHSPTYTTAG-----GGGGSAGFIDPAFGHAYAIVSLVLIPTSSEDDGAGSGDFGDISSLGESNSFQVASLDDRSTVSIWVVTESKRIDEGGSQTHLGLSPGGRIRMTLSKSLRPVAEFGDCTANRARFPRLSFSSATSAGATAATSFAPAAAHALAFSREDPNRFLVSGTCECIAHASRLGDLPTPRSFCAPRLPFWVDRLAAAKLGGNGAGGARVATSREEERGLGGVSCLSFSPFFRRYFLAGCENGSVRLYKDDCAVPLNVWEGFSARDSDLRSNIREANDPACGGGFEGWSTSIASVAWSEHRPAVFFALDKIGTLHGFDLLEDDINPIASE 904
            S  +R  LV+ H  P              +K F+  +L+    +CVW+      +P  VL  E    C C + F+  ++  GT  G ++LWDLRE   + H  + +         + T++T G             I+P     Y   + VL P S++++         IS L    SF +ASLD+   ++IWVV E  + D  GSQ+ LGL PGG+I++  S +++  + F          P+++            TS  P     + F   DPNRF++      I+H +R     +P+ F                              + EER +  V+ + FSPF    FLAGC +GS+RL++ +   P+  W                 ND   G        ++ ++ W++ RPAVF   D I  ++ +DLLE+D+ P+A +
Sbjct:  670 SQIQRQTLVSVHELP--------------EKPFS-DILDKRYILCVWDI-WQPSSPQKVLICESKVMCCCFSPFKAILLFAGTIHGSVVLWDLREDSRMHHYVKLKDCAWT--FRTATFSTDGVLTAVNHRSPVQSIEPVSTSVYKKQNFVLSPFSNQEE---------ISGL----SFHIASLDENGILNIWVVVELSKADFAGSQSDLGLIPGGKIKLVHSSTIQLNSSFP---------PKVN------------TSLKPMQTLIVKFLPSDPNRFIIGTDMGVISHGARHDSKVSPKLF---------------------------KPQQREERPVK-VTVIDFSPFGDPMFLAGCSDGSIRLHQLNSEYPICQW-----------------NDTTNG-------RAVIALKWTQTRPAVFLVQDDISNIYVWDLLENDLGPVAKQ 1015          
BLAST of mRNA_H-elongata_contig11490.1191.1 vs. uniprot
Match: UPI0005298AE3 (WD repeat-containing protein 60 n=1 Tax=Colius striatus TaxID=57412 RepID=UPI0005298AE3)

HSP 1 Score: 137 bits (345), Expect = 3.000e-29
Identity = 126/467 (26.98%), Postives = 191/467 (40.90%), Query Frame = 0
Query:  459 FSHAKRSMLVTAHARPAWHGVVLTGDDVDSDKKFAASMLEGCGFVCVWNPDTSKETPMNVLFGEGVFKCVCLTLFQPHVILVGTGEGCLLLWDLREPVAISHGQEAQKLGLKCGLHSPTYTTAGGGGGSAGFIDPAFGHAYAIVSLVLIPTSSEDDGAGSGDFGDIS-SLGESNS---FQVASLDDRSTVSIWVVTESKRIDEGGSQTHLGLSPGGRIR------MTLSKSLRPVAEFGDCTANRARFPRLSFSSATSAGATAATSFAPAAAHALAFSREDPNRFLVSGTCECIAHASRLGDLPTPRSFCAPRLPFWVDRLAAAKLGGNGAGGARVATSREEERGLGGVS--CLSFSPFFRRYFLAGCENGSVRLYKDDCAVPLNVWEGFSARDSDLRSNIREANDPACGGGFEGWSTSIASVAWSEHRPAVFFALDKIGTLHGFDLLEDDINPIASEQCPTQGMGT 913
            FS  +R  L++ H  P               +K +  +L     +CVWN      +P  VL  +    C C +  +  ++  GT +G LL+WDLRE   + H Q     G+      PT++T G        I  +  H   I+++  + TS   D     ++G +S S  E  S   FQ+AS+D+  T+++WVV E +++D  GSQT LGL PGG+++      M LS SL P            R P+                        + F   DPN F+V      + H +R G    P+ F                              R +E  L  +S   + F PF +  FL GC +GS+RLY+     PL  W                 ND   G         I ++ W+  RPAVFF LD    ++ +DLLE+D+ P+A +  P++ + T
Sbjct:  615 FSQVQRQTLLSVHGLP---------------EKASVGLLNRKSIICVWNI-WQPSSPQKVLICDSEVICCCFSPNKTTLVFAGTTDGSLLVWDLREDSRM-HLQMMIN-GIDWTFRVPTFSTDG--------ILLSVNHTSPILAVEPVSTSLYTDK----NYGLLSLSYQEEMSGPPFQIASMDENGTLNMWVVIELRKVDLAGSQTDLGLVPGGKVKLVHSSTMELSNSLFPKDV-------HQRMPQTL---------------------TIKFLSSDPNHFIVGTNIGLVGHGTRNGLKVLPKLF------------------------------RPQESRLRSISISAIDFFPFGKPLFLVGCSDGSIRLYQMTSEYPLMQW-----------------NDSTNG-------QPIIALQWALTRPAVFFVLDASSNIYIWDLLENDLLPVAKQTVPSENVVT 969          
BLAST of mRNA_H-elongata_contig11490.1191.1 vs. uniprot
Match: UPI001CF78EF1 (cytoplasmic dynein 2 intermediate chain 1 isoform X1 n=8 Tax=Varanus komodoensis TaxID=61221 RepID=UPI001CF78EF1)

HSP 1 Score: 137 bits (345), Expect = 3.190e-29
Identity = 113/451 (25.06%), Postives = 188/451 (41.69%), Query Frame = 0
Query:  460 SHAKRSMLVTAHARPAWHGVVLTGDDVDSDKKFAASMLEGCGFVCVWNPDTSKETPMNVLFGEGVFKCVCLTLFQPHVILVGTGEGCLLLWDLREPVAISHGQEAQKLGLKCGLHSPTYTTAGGGGGSAGFIDPAFGHAYAIVSLVLIPTS-SEDDGAGSGDFGDISSLGESN-----SFQVASLDDRSTVSIWVVTESKRIDEGGSQTHLGLSPGGRIRMTLSKSLRPVAEFGDCTANRARFPRLSFSSATSAGATAATSFAPAAAHALAFSREDPNRFLVSGTCECIAHASRLGDLPTPRSFCAPRLPFWVDRLAAAKLGGNGAGGARVATSREEERGLGGVSCLSFSPFFRRYFLAGCENGSVRLYKDDCAVPLNVWEGFSARDSDLRSNIREANDPACGGGFEGWSTSIASVAWSEHRPAVFFALDKIGTLHGFDLLEDDINPIASE 904
            S A+R  L++ H  P   G                 +L+    +CVWN      +P  +LF E    C C +  +  ++  GT +G +L+WDLRE   + H  +           SPT++T G        +  +  H   ++++  + TS  ++   G      +S L  S      SFQ+AS+D+  T+S+WVV E ++ D  GSQ+ LGL PGG+I++  S  ++    F                          T   P   + + F   +PN F+V      ++H +R  +L  P  +  P+                  GG+R             V+ + FSPF +  FL GC +GS+RL++     PL  W   ++                          +I ++ W+  RPAVFF LD +  ++ +DLLE+D++P+A +
Sbjct:  666 SQAQRQALLSVHGLPDTSG---------------HPVLDSKYIICVWNV-WQPSSPQKLLFCESQVTCCCFSPSKATLVFAGTVDGSVLVWDLREHARMHHCLKVNDTDWT--FRSPTFSTDG--------VFTSVNHTCPVLTVESVSTSVCKEQNCG------LSYLSSSEEMLGLSFQIASMDENGTLSLWVVVELQKGDLAGSQSDLGLIPGGKIKLVHSSKVQLNCSFSPKD----------------------TMMVPQTLN-IKFLPSNPNHFVVGTDVAVVSHGTR-HELKVPPRWFKPQQ-----------------GGSRSTR----------VNTIDFSPFGKPIFLVGCSDGSIRLHQITSEFPLMQWNNSTS------------------------GQAIVALQWALTRPAVFFVLDAMSVVYIWDLLENDLSPVAKQ 1009          
BLAST of mRNA_H-elongata_contig11490.1191.1 vs. uniprot
Match: A0A6J0HLB6_9PASS (WD repeat-containing protein 60 n=12 Tax=Passeriformes TaxID=9126 RepID=A0A6J0HLB6_9PASS)

HSP 1 Score: 135 bits (340), Expect = 1.200e-28
Identity = 120/463 (25.92%), Postives = 186/463 (40.17%), Query Frame = 0
Query:  460 SHAKRSMLVTAHARPAWHGVVLTGDDVDSDKKFAASMLEGCGFVCVWNPDTSKETPMNVLFGEGVFKCVCLTLFQPHVILVGTGEGCLLLWDLREPVAISHGQEAQKLGLKCGLHSPTYTTAGGGGGSAGFIDPAFGHAYAIVSLVLIPTSSEDDGAGSGDFGDISSLGESNS-----FQVASLDDRSTVSIWVVTESKRIDEGGSQTHLGLSPGGRIR------MTLSKSLRPVAEFGDCTANRARFPRLSFSSATSAGATAATSFAPAAAHALAFSREDPNRFLVSGTCECIAHASRLGDLPTPRSFCAPRLPFWVDRLAAAKLGGNGAGGARVATSREEERGLGGVS--CLSFSPFFRRYFLAGCENGSVRLYKDDCAVPLNVWEGFSARDSDLRSNIREANDPACGGGFEGWSTSIASVAWSEHRPAVFFALDKIGTLHGFDLLEDDINPIASEQCPTQ 909
            S  +R  L++ H  P   GV                +L     +CVWN      +P  VL  +    C C +  +  ++  GT +G LL+WDLRE   +         G       PT++T G        I  +  H   ++++  + TS + D +    +G +SSL          FQ+AS+D+   +++WVV E +++D  GSQT LGL PGG+++      M L+ SL P          R R P+                        + F   +PN F+V      + H +R G    P+ F                              R +E GL  +S   + F PF +  FL GC +GS+RL++     P+  W                 ND   G         I ++ W+  RPAVFFALD    ++ +DLLE+D+ P+A E  P++
Sbjct:  621 SQVQRQTLLSVHGLPEKAGV---------------DLLNRKSLICVWNI-WQPSSPQKVLICDSEVMCCCFSPSKTTLVFAGTIDGSLLVWDLREDSRMH--PHTMMSGTDWTFRVPTFSTDG--------ILNSVNHTSPVLAVEPVSTSLDTDHS----YG-LSSLSYQEEVSGPPFQIASMDENGILNMWVVVELQKVDLAGSQTDLGLVPGGKVKLVHSSAMELNNSLFPKDI-------RQRMPQTL---------------------TIKFLSSNPNHFIVGTNIGLVGHGTRHGLKVVPKLF------------------------------RPQESGLRSISITAIDFFPFGKPLFLVGCSDGSIRLHQMTSEYPVMQW-----------------NDSTNG-------QPIIALQWALTRPAVFFALDASSNIYIWDLLENDLLPVAKETIPSE 970          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11490.1191.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXE1_ECTSI4.820e-21243.86WD repeat-containing protein 60 n=2 Tax=Ectocarpus... [more]
A0A835Z6D0_9STRA5.040e-5128.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XQJ7_HETAK2.250e-3828.30Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
UPI001AAC4E694.720e-3125.50cytoplasmic dynein 2 intermediate chain 1 isoform ... [more]
UPI001301E3A43.990e-3026.22WD repeat-containing protein 60 isoform X3 n=1 Tax... [more]
A0A6P9ARF4_PANGU6.140e-3025.45WD repeat-containing protein 60 isoform X1 n=16 Ta... [more]
G3WJI9_SARHA1.400e-2926.22Dynein 2 intermediate chain 1 n=2 Tax=Sarcophilus ... [more]
UPI0005298AE33.000e-2926.98WD repeat-containing protein 60 n=1 Tax=Colius str... [more]
UPI001CF78EF13.190e-2925.06cytoplasmic dynein 2 intermediate chain 1 isoform ... [more]
A0A6J0HLB6_9PASS1.200e-2825.92WD repeat-containing protein 60 n=12 Tax=Passerifo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 512..551
e-value: 30.0
score: 7.7
coord: 787..823
e-value: 0.56
score: 18.6
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 702..942
e-value: 7.3E-6
score: 27.0
IPR042505WD repeat-containing protein 60PANTHERPTHR16022FAMILY NOT NAMEDcoord: 796..902
coord: 3..264
coord: 361..757
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 487..881

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11490contigH-elongata_contig11490:1386..8695 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11490.1191.1mRNA_H-elongata_contig11490.1191.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11490 1386..8695 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11490.1191.1 ID=prot_H-elongata_contig11490.1191.1|Name=mRNA_H-elongata_contig11490.1191.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=968bp
MEGDGYEDEGFEEYSDEFESGEADNENQPSMAVLSRATPHGETREADGAR
PARSPIVSPALRMRNTQDCKAPDDEALQELRYSLREENNIARQRKNAKLV
TSALEVLPTADTKDNSQVAARGEKKGFKSSKRPATQGRAQVMDRGEFLEK
AYNGNNALSSAAAATARSRNSSFELADAKALTRALAKGDPRAKRVHAIRA
RLRLEVESTRLFDQSPITPIDLYHRRLRAQPAVIRQVASQTNDDARSVEA
QTEEVPKFDKEIQFHLGHDDTTLENLMRCLRSTRRSSFRQTPDGRSKEDE
EQNGENKQGGLGVEKTPPGRRKTFNVLSNTEGNGSGGPMKICADGGLEYD
PLVSETTAVQQPQRLRKFLLQACVVMETLCEENLSSAADRKSPKRSGQTE
EDREEPGNKERSLFPGGAHAKDWEELGVNVYVASKGSPKSAAAGINILID
SSIVVGVAFSHAKRSMLVTAHARPAWHGVVLTGDDVDSDKKFAASMLEGC
GFVCVWNPDTSKETPMNVLFGEGVFKCVCLTLFQPHVILVGTGEGCLLLW
DLREPVAISHGQEAQKLGLKCGLHSPTYTTAGGGGGSAGFIDPAFGHAYA
IVSLVLIPTSSEDDGAGSGDFGDISSLGESNSFQVASLDDRSTVSIWVVT
ESKRIDEGGSQTHLGLSPGGRIRMTLSKSLRPVAEFGDCTANRARFPRLS
FSSATSAGATAATSFAPAAAHALAFSREDPNRFLVSGTCECIAHASRLGD
LPTPRSFCAPRLPFWVDRLAAAKLGGNGAGGARVATSREEERGLGGVSCL
SFSPFFRRYFLAGCENGSVRLYKDDCAVPLNVWEGFSARDSDLRSNIREA
NDPACGGGFEGWSTSIASVAWSEHRPAVFFALDKIGTLHGFDLLEDDINP
IASEQCPTQGMGTRDAQEAVAAVTSSPPMLALSSNSLTTGSQPRVTLVVH
GRIFTRSLSRRMCRPAES
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR042505WDR60
IPR036322WD40_repeat_dom_sf