prot_H-elongata_contig47589.11889.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig47589.11889.1
Unique Nameprot_H-elongata_contig47589.11889.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length128
Homology
BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: D8LNW5_ECTSI (Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW5_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 3.800e-73
Identity = 113/125 (90.40%), Postives = 120/125 (96.00%), Query Frame = 0
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 125
            RWEFK+PTPFLRTREFLWQEGHTAHAS+ DAD MV+QAL+LYRRVYEELLAVPVI+GTKTEAEKFAGGHKTTTVEAYISG+GRAIQGATSHHLGQNFGKMFKI YED+ GE AIPWQTSWGLTTR
Sbjct:  547 RWEFKNPTPFLRTREFLWQEGHTAHASFEDADKMVIQALELYRRVYEELLAVPVIMGTKTEAEKFAGGHKTTTVEAYISGTGRAIQGATSHHLGQNFGKMFKIQYEDENGEQAIPWQTSWGLTTR 671          
BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: B8LCI1_THAPS (Proline--tRNA ligase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LCI1_THAPS)

HSP 1 Score: 227 bits (578), Expect = 7.590e-70
Identity = 108/125 (86.40%), Postives = 113/125 (90.40%), Query Frame = 0
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 125
            RWEFKDPTPFLRTREFLWQEGHTAHASY DAD MVMQALDLYRRVYEELLA+PVI G KTE EKFAGGH+TTTVEAYI  SGRAIQGATSH+L QNFGKMF INY+D+KGE  I WQTSWGLTTR
Sbjct:  167 RWEFKDPTPFLRTREFLWQEGHTAHASYEDADVMVMQALDLYRRVYEELLAIPVIPGYKTEKEKFAGGHQTTTVEAYIPVSGRAIQGATSHNLWQNFGKMFDINYQDEKGETKIAWQTSWGLTTR 291          
BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: K0SBF7_THAOC (Proline--tRNA ligase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBF7_THAOC)

HSP 1 Score: 222 bits (566), Expect = 4.980e-68
Identity = 104/125 (83.20%), Postives = 111/125 (88.80%), Query Frame = 0
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 125
            RWEFKDPTPFLRTREFLWQEGHTAHAS+ DA+ MV +ALDLYRRVYEELLA+PV+ G KTE EKFAGGH TTTVEAYI  SGRAIQGATSHHLGQNFGKMF INY+D+KGE    WQTSWGLTTR
Sbjct:  161 RWEFKDPTPFLRTREFLWQEGHTAHASFDDANVMVRKALDLYRRVYEELLAIPVVPGYKTEKEKFAGGHSTTTVEAYIPVSGRAIQGATSHHLGQNFGKMFDINYQDEKGETQTAWQTSWGLTTR 285          
BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: A0A7S0T0X0_9STRA (Proline--tRNA ligase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0T0X0_9STRA)

HSP 1 Score: 214 bits (544), Expect = 6.000e-66
Identity = 100/125 (80.00%), Postives = 110/125 (88.00%), Query Frame = 0
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 125
            RWEFKD TPFLR+REFLWQEGHTAHASY +A   V+  L+LY++VYE+LLAVPVI G KTE EKFAGGH TTTVEAYI+GSGRAIQGATSH+LG  FGKMFKI YED+KGE AIPWQTSWGLTTR
Sbjct:   50 RWEFKDATPFLRSREFLWQEGHTAHASYEEAQARVLSILELYKQVYEDLLAVPVIKGMKTEMEKFAGGHHTTTVEAYINGSGRAIQGATSHNLGLGFGKMFKIYYEDEKGERAIPWQTSWGLTTR 174          
BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: B7GC21_PHATC (Proline--tRNA ligase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GC21_PHATC)

HSP 1 Score: 214 bits (546), Expect = 1.700e-65
Identity = 99/125 (79.20%), Postives = 114/125 (91.20%), Query Frame = 0
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 125
            RWEFK PTPFLRTREFLWQEGHTAHA++ DAD  VM+AL+LYR VYE+LLAVPV+ G KTE EKFAGG +TTTVEAYI+GSGRAIQGATSH+LGQNFGKMF+I+++++KGE  IPWQTSWGLTTR
Sbjct:  116 RWEFKYPTPFLRTREFLWQEGHTAHATFEDADATVMEALELYRGVYEDLLAVPVVPGYKTEKEKFAGGFRTTTVEAYIAGSGRAIQGATSHNLGQNFGKMFEISFQNEKGESQIPWQTSWGLTTR 240          
BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: A0A7S4HM09_9STRA (Proline--tRNA ligase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HM09_9STRA)

HSP 1 Score: 215 bits (548), Expect = 3.700e-65
Identity = 101/125 (80.80%), Postives = 111/125 (88.80%), Query Frame = 0
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 125
            RWEFK PTPFLR+REFLWQEGHTAH SY DA  MV QALDLYR VY+ELLAVPV+ G KTE EKFAGGH+TTTVEAYI+GSGRAIQGATSH+LGQNFGKMF I+++D+KGE  I WQTSWGLTTR
Sbjct:  182 RWEFKYPTPFLRSREFLWQEGHTAHVSYDDAQVMVRQALDLYRDVYQELLAVPVVPGYKTEKEKFAGGHQTTTVEAYIAGSGRAIQGATSHNLGQNFGKMFDISFQDEKGETQIAWQTSWGLTTR 306          
BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: A0A6T8LU20_9STRA (Proline--tRNA ligase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8LU20_9STRA)

HSP 1 Score: 213 bits (542), Expect = 3.450e-64
Identity = 100/125 (80.00%), Postives = 112/125 (89.60%), Query Frame = 0
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 125
            RWEFKDPTPFLR+REFLWQEGHTAHA++ +A+ MVMQALDLYRRVYEELLAVPVI G KTE EKFAGG +TTTVEAYI  SGRAIQGATSHHLGQNFGKMF+I ++++ G+  I WQTSWGLTTR
Sbjct:  193 RWEFKDPTPFLRSREFLWQEGHTAHATFDEANEMVMQALDLYRRVYEELLAVPVIPGYKTEKEKFAGGDRTTTVEAYIPQSGRAIQGATSHHLGQNFGKMFEIKFQNEAGKSEIAWQTSWGLTTR 317          
BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: A0A1Z5KNG0_FISSO (Proline--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KNG0_FISSO)

HSP 1 Score: 219 bits (557), Expect = 4.450e-64
Identity = 102/125 (81.60%), Postives = 113/125 (90.40%), Query Frame = 0
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 125
            RWEFK PTPFLRTREFLWQEGHTAHA++ DA+ MVM AL+LYR+VYE+LLAVPVI G KTEAEKFAGG++TTTVEAYI+GSGRAIQGATSHHLGQNFGKMF I ++DDKGE    WQTSWGLTTR
Sbjct:  577 RWEFKYPTPFLRTREFLWQEGHTAHATFEDAEKMVMDALELYRQVYEDLLAVPVIPGYKTEAEKFAGGYRTTTVEAYIAGSGRAIQGATSHHLGQNFGKMFDITFQDDKGETQTAWQTSWGLTTR 701          
BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: A0A6V2H5C2_9STRA (Proline--tRNA ligase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2H5C2_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.120e-63
Identity = 102/125 (81.60%), Postives = 111/125 (88.80%), Query Frame = 0
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 125
            RWEFKDPTPFLRTREFLWQEGHTAH S+ADAD MVMQAL LY+ VY++LLAVPVI G KTE EKFAGGH+TTTVEAYI GSGRAIQGATSH+LGQNFGKMF I Y+D+K +  I WQTSWGLTTR
Sbjct:  570 RWEFKDPTPFLRTREFLWQEGHTAHVSHADADVMVMQALGLYKGVYQDLLAVPVIPGYKTEKEKFAGGHQTTTVEAYIPGSGRAIQGATSHNLGQNFGKMFDITYQDEKAQSQIAWQTSWGLTTR 694          
BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: A0A7S1Z342_TRICV (Proline--tRNA ligase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z342_TRICV)

HSP 1 Score: 214 bits (545), Expect = 2.620e-63
Identity = 102/125 (81.60%), Postives = 111/125 (88.80%), Query Frame = 0
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 125
            RWEFKDPTPFLR+REFLWQEGHTAHASY DA+ MV QAL+LYR VYE+LLAVPVI G KTE EKFAGG++TTTVEAYI  SGRAIQGATSH+LGQNFGKMF I Y+D+KGE  I WQTSWGLTTR
Sbjct:  394 RWEFKDPTPFLRSREFLWQEGHTAHASYDDANVMVRQALELYRGVYEDLLAVPVIPGYKTEKEKFAGGYQTTTVEAYIPMSGRAIQGATSHNLGQNFGKMFDIKYQDEKGESQIAWQTSWGLTTR 518          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNW5_ECTSI3.800e-7390.40Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
B8LCI1_THAPS7.590e-7086.40Proline--tRNA ligase (Fragment) n=1 Tax=Thalassios... [more]
K0SBF7_THAOC4.980e-6883.20Proline--tRNA ligase n=1 Tax=Thalassiosira oceanic... [more]
A0A7S0T0X0_9STRA6.000e-6680.00Proline--tRNA ligase n=1 Tax=Chromulina nebulosa T... [more]
B7GC21_PHATC1.700e-6579.20Proline--tRNA ligase n=2 Tax=Phaeodactylum tricorn... [more]
A0A7S4HM09_9STRA3.700e-6580.80Proline--tRNA ligase n=1 Tax=Odontella aurita TaxI... [more]
A0A6T8LU20_9STRA3.450e-6480.00Proline--tRNA ligase n=1 Tax=Proboscia inermis Tax... [more]
A0A1Z5KNG0_FISSO4.450e-6481.60Proline--tRNA ligase n=2 Tax=Fistulifera solaris T... [more]
A0A6V2H5C2_9STRA1.120e-6381.60Proline--tRNA ligase n=3 Tax=Ditylum brightwellii ... [more]
A0A7S1Z342_TRICV2.620e-6381.60Proline--tRNA ligase (Fragment) n=1 Tax=Trieres ch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002314Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)PFAMPF00587tRNA-synt_2bcoord: 3..122
e-value: 1.8E-10
score: 41.1
NoneNo IPR availableGENE3D3.30.930.10coord: 1..126
e-value: 2.8E-46
score: 160.0
NoneNo IPR availablePANTHERPTHR43382FAMILY NOT NAMEDcoord: 1..126
NoneNo IPR availablePANTHERPTHR43382:SF2BIFUNCTIONAL GLUTAMATE/PROLINE--TRNA LIGASEcoord: 1..126
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 1..126
IPR006195Aminoacyl-tRNA synthetase, class IIPROSITEPS50862AA_TRNA_LIGASE_IIcoord: 1..127
score: 13.252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47589contigH-elongata_contig47589:1792..3817 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47589.11889.1mRNA_H-elongata_contig47589.11889.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig47589 1792..3817 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig47589.11889.1 ID=prot_H-elongata_contig47589.11889.1|Name=mRNA_H-elongata_contig47589.11889.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=128bp
RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELL
AVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKM
FKINYEDDKGEMAIPWQTSWGLTTRLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002314aa-tRNA-synt_IIb
IPR006195aa-tRNA-synth_II