mRNA_H-elongata_contig47589.11889.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig47589.11889.1
Unique NamemRNA_H-elongata_contig47589.11889.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: D8LNW5_ECTSI (Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW5_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 3.800e-73
Identity = 113/125 (90.40%), Postives = 120/125 (96.00%), Query Frame = 1 
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 375
            RWEFK+PTPFLRTREFLWQEGHTAHAS+ DAD MV+QAL+LYRRVYEELLAVPVI+GTKTEAEKFAGGHKTTTVEAYISG+GRAIQGATSHHLGQNFGKMFKI YED+ GE AIPWQTSWGLTTR
Sbjct:  547 RWEFKNPTPFLRTREFLWQEGHTAHASFEDADKMVIQALELYRRVYEELLAVPVIMGTKTEAEKFAGGHKTTTVEAYISGTGRAIQGATSHHLGQNFGKMFKIQYEDENGEQAIPWQTSWGLTTR 671
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BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: B8LCI1_THAPS (Proline--tRNA ligase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LCI1_THAPS)

HSP 1 Score: 227 bits (578), Expect = 7.590e-70
Identity = 108/125 (86.40%), Postives = 113/125 (90.40%), Query Frame = 1 
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 375
            RWEFKDPTPFLRTREFLWQEGHTAHASY DAD MVMQALDLYRRVYEELLA+PVI G KTE EKFAGGH+TTTVEAYI  SGRAIQGATSH+L QNFGKMF INY+D+KGE  I WQTSWGLTTR
Sbjct:  167 RWEFKDPTPFLRTREFLWQEGHTAHASYEDADVMVMQALDLYRRVYEELLAIPVIPGYKTEKEKFAGGHQTTTVEAYIPVSGRAIQGATSHNLWQNFGKMFDINYQDEKGETKIAWQTSWGLTTR 291
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BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: K0SBF7_THAOC (Proline--tRNA ligase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBF7_THAOC)

HSP 1 Score: 222 bits (566), Expect = 4.980e-68
Identity = 104/125 (83.20%), Postives = 111/125 (88.80%), Query Frame = 1 
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 375
            RWEFKDPTPFLRTREFLWQEGHTAHAS+ DA+ MV +ALDLYRRVYEELLA+PV+ G KTE EKFAGGH TTTVEAYI  SGRAIQGATSHHLGQNFGKMF INY+D+KGE    WQTSWGLTTR
Sbjct:  161 RWEFKDPTPFLRTREFLWQEGHTAHASFDDANVMVRKALDLYRRVYEELLAIPVVPGYKTEKEKFAGGHSTTTVEAYIPVSGRAIQGATSHHLGQNFGKMFDINYQDEKGETQTAWQTSWGLTTR 285
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BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: A0A7S0T0X0_9STRA (Proline--tRNA ligase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0T0X0_9STRA)

HSP 1 Score: 214 bits (544), Expect = 6.000e-66
Identity = 100/125 (80.00%), Postives = 110/125 (88.00%), Query Frame = 1 
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 375
            RWEFKD TPFLR+REFLWQEGHTAHASY +A   V+  L+LY++VYE+LLAVPVI G KTE EKFAGGH TTTVEAYI+GSGRAIQGATSH+LG  FGKMFKI YED+KGE AIPWQTSWGLTTR
Sbjct:   50 RWEFKDATPFLRSREFLWQEGHTAHASYEEAQARVLSILELYKQVYEDLLAVPVIKGMKTEMEKFAGGHHTTTVEAYINGSGRAIQGATSHNLGLGFGKMFKIYYEDEKGERAIPWQTSWGLTTR 174
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BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: B7GC21_PHATC (Proline--tRNA ligase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GC21_PHATC)

HSP 1 Score: 214 bits (546), Expect = 1.700e-65
Identity = 99/125 (79.20%), Postives = 114/125 (91.20%), Query Frame = 1 
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 375
            RWEFK PTPFLRTREFLWQEGHTAHA++ DAD  VM+AL+LYR VYE+LLAVPV+ G KTE EKFAGG +TTTVEAYI+GSGRAIQGATSH+LGQNFGKMF+I+++++KGE  IPWQTSWGLTTR
Sbjct:  116 RWEFKYPTPFLRTREFLWQEGHTAHATFEDADATVMEALELYRGVYEDLLAVPVVPGYKTEKEKFAGGFRTTTVEAYIAGSGRAIQGATSHNLGQNFGKMFEISFQNEKGESQIPWQTSWGLTTR 240
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BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: A0A7S4HM09_9STRA (Proline--tRNA ligase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HM09_9STRA)

HSP 1 Score: 215 bits (548), Expect = 3.700e-65
Identity = 101/125 (80.80%), Postives = 111/125 (88.80%), Query Frame = 1 
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 375
            RWEFK PTPFLR+REFLWQEGHTAH SY DA  MV QALDLYR VY+ELLAVPV+ G KTE EKFAGGH+TTTVEAYI+GSGRAIQGATSH+LGQNFGKMF I+++D+KGE  I WQTSWGLTTR
Sbjct:  182 RWEFKYPTPFLRSREFLWQEGHTAHVSYDDAQVMVRQALDLYRDVYQELLAVPVVPGYKTEKEKFAGGHQTTTVEAYIAGSGRAIQGATSHNLGQNFGKMFDISFQDEKGETQIAWQTSWGLTTR 306
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BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: A0A6T8LU20_9STRA (Proline--tRNA ligase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8LU20_9STRA)

HSP 1 Score: 213 bits (542), Expect = 3.450e-64
Identity = 100/125 (80.00%), Postives = 112/125 (89.60%), Query Frame = 1 
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 375
            RWEFKDPTPFLR+REFLWQEGHTAHA++ +A+ MVMQALDLYRRVYEELLAVPVI G KTE EKFAGG +TTTVEAYI  SGRAIQGATSHHLGQNFGKMF+I ++++ G+  I WQTSWGLTTR
Sbjct:  193 RWEFKDPTPFLRSREFLWQEGHTAHATFDEANEMVMQALDLYRRVYEELLAVPVIPGYKTEKEKFAGGDRTTTVEAYIPQSGRAIQGATSHHLGQNFGKMFEIKFQNEAGKSEIAWQTSWGLTTR 317
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BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: A0A1Z5KNG0_FISSO (Proline--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KNG0_FISSO)

HSP 1 Score: 219 bits (557), Expect = 4.450e-64
Identity = 102/125 (81.60%), Postives = 113/125 (90.40%), Query Frame = 1 
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 375
            RWEFK PTPFLRTREFLWQEGHTAHA++ DA+ MVM AL+LYR+VYE+LLAVPVI G KTEAEKFAGG++TTTVEAYI+GSGRAIQGATSHHLGQNFGKMF I ++DDKGE    WQTSWGLTTR
Sbjct:  577 RWEFKYPTPFLRTREFLWQEGHTAHATFEDAEKMVMDALELYRQVYEDLLAVPVIPGYKTEAEKFAGGYRTTTVEAYIAGSGRAIQGATSHHLGQNFGKMFDITFQDDKGETQTAWQTSWGLTTR 701
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BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: A0A6V2H5C2_9STRA (Proline--tRNA ligase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2H5C2_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.120e-63
Identity = 102/125 (81.60%), Postives = 111/125 (88.80%), Query Frame = 1 
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 375
            RWEFKDPTPFLRTREFLWQEGHTAH S+ADAD MVMQAL LY+ VY++LLAVPVI G KTE EKFAGGH+TTTVEAYI GSGRAIQGATSH+LGQNFGKMF I Y+D+K +  I WQTSWGLTTR
Sbjct:  570 RWEFKDPTPFLRTREFLWQEGHTAHVSHADADVMVMQALGLYKGVYQDLLAVPVIPGYKTEKEKFAGGHQTTTVEAYIPGSGRAIQGATSHNLGQNFGKMFDITYQDEKAQSQIAWQTSWGLTTR 694
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BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Match: A0A7S1Z342_TRICV (Proline--tRNA ligase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z342_TRICV)

HSP 1 Score: 214 bits (545), Expect = 2.620e-63
Identity = 102/125 (81.60%), Postives = 111/125 (88.80%), Query Frame = 1 
Query:    1 RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELLAVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKMFKINYEDDKGEMAIPWQTSWGLTTR 375
            RWEFKDPTPFLR+REFLWQEGHTAHASY DA+ MV QAL+LYR VYE+LLAVPVI G KTE EKFAGG++TTTVEAYI  SGRAIQGATSH+LGQNFGKMF I Y+D+KGE  I WQTSWGLTTR
Sbjct:  394 RWEFKDPTPFLRSREFLWQEGHTAHASYDDANVMVRQALELYRGVYEDLLAVPVIPGYKTEKEKFAGGYQTTTVEAYIPMSGRAIQGATSHNLGQNFGKMFDIKYQDEKGESQIAWQTSWGLTTR 518
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig47589.11889.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNW5_ECTSI3.800e-7390.40Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
B8LCI1_THAPS7.590e-7086.40Proline--tRNA ligase (Fragment) n=1 Tax=Thalassios... [more]
K0SBF7_THAOC4.980e-6883.20Proline--tRNA ligase n=1 Tax=Thalassiosira oceanic... [more]
A0A7S0T0X0_9STRA6.000e-6680.00Proline--tRNA ligase n=1 Tax=Chromulina nebulosa T... [more]
B7GC21_PHATC1.700e-6579.20Proline--tRNA ligase n=2 Tax=Phaeodactylum tricorn... [more]
A0A7S4HM09_9STRA3.700e-6580.80Proline--tRNA ligase n=1 Tax=Odontella aurita TaxI... [more]
A0A6T8LU20_9STRA3.450e-6480.00Proline--tRNA ligase n=1 Tax=Proboscia inermis Tax... [more]
A0A1Z5KNG0_FISSO4.450e-6481.60Proline--tRNA ligase n=2 Tax=Fistulifera solaris T... [more]
A0A6V2H5C2_9STRA1.120e-6381.60Proline--tRNA ligase n=3 Tax=Ditylum brightwellii ... [more]
A0A7S1Z342_TRICV2.620e-6381.60Proline--tRNA ligase (Fragment) n=1 Tax=Trieres ch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig47589contigH-elongata_contig47589:1792..3817 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score244.6
Seed ortholog evalue2.5e-62
Seed eggNOG ortholog2880.D8LNW5
KEGG rclassRC00004,RC00049,RC00055,RC00069,RC00296,RC00523,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799,ko:K01120,ko:K01194,ko:K01874,ko:K01881,ko:K15437,ko:K22119
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR00010,R00191,R01234,R03522,R03659,R03661,R04773,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00230,ko00450,ko00480,ko00500,ko00970,ko00980,ko00982,ko00983,ko01100,ko01524,ko05200,ko05204,ko05225,ko05418,map00230,map00450,map00480,map00500,map00970,map00980,map00982,map00983,map01100,map01524,map05200,map05204,map05225,map05418
KEGG ModuleM00359,M00360
EggNOG free text desc.synthetase
EggNOG OGsCOG0442@1,COG0625@1,KOG0867@2759,KOG4163@2759
EC2.5.1.18,3.1.4.17,3.2.1.28,6.1.1.10,6.1.1.15
COG Functional cat.J
CAZyGH37
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00537,ko01000,ko01007,ko02000,ko03016
Hectar predicted targeting categoryother localisation
Exons3
Model size384
Cds size384
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig47589.11889.1prot_H-elongata_contig47589.11889.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig47589 1792..3817 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930786.1280735-CDS-H-elongata_contig47589:1791..19601622930786.1280735-CDS-H-elongata_contig47589:1791..1960Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47589 1792..1960 +
1691679569.555123-CDS-H-elongata_contig47589:1791..19601691679569.555123-CDS-H-elongata_contig47589:1791..1960Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47589 1792..1960 +
1622930786.1526053-CDS-H-elongata_contig47589:3227..33631622930786.1526053-CDS-H-elongata_contig47589:3227..3363Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47589 3228..3363 +
1691679569.5681422-CDS-H-elongata_contig47589:3227..33631691679569.5681422-CDS-H-elongata_contig47589:3227..3363Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47589 3228..3363 +
1622930786.1715853-CDS-H-elongata_contig47589:3738..38171622930786.1715853-CDS-H-elongata_contig47589:3738..3817Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47589 3739..3817 +
1691679569.577319-CDS-H-elongata_contig47589:3738..38171691679569.577319-CDS-H-elongata_contig47589:3738..3817Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig47589 3739..3817 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig47589.11889.1

>prot_H-elongata_contig47589.11889.1 ID=prot_H-elongata_contig47589.11889.1|Name=mRNA_H-elongata_contig47589.11889.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=128bp
RWEFKDPTPFLRTREFLWQEGHTAHASYADADTMVMQALDLYRRVYEELL
AVPVILGTKTEAEKFAGGHKTTTVEAYISGSGRAIQGATSHHLGQNFGKM
FKINYEDDKGEMAIPWQTSWGLTTRLG*
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mRNA from alignment at H-elongata_contig47589:1792..3817+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig47589.11889.1 ID=mRNA_H-elongata_contig47589.11889.1|Name=mRNA_H-elongata_contig47589.11889.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2026bp|location=Sequence derived from alignment at H-elongata_contig47589:1792..3817+ (Himanthalia elongata Himel1 dioecious)
AGATGGGAGTTCAAGGACCCGACGCCGTTCCTCCGCACTCGGGAGTTCCT
GTGGCAGGAGGGGCATACGGCTCACGCGAGCTACGCCGACGCGGACACGA
TGGTGATGCAGGCTTTAGATCTATACCGCAGGGTGTACGAGGAGCTACTC
GCGGTTCCTGTCATCTTGGGTGAGGGGGGGTTGCAATAAAAGAGGCGTTT
TCTACGACTTTTCTTATACCACCGGGAAGCAGGACGAAAAATATATTTTT
TTGTTTTCGCCCCAGAAACGGTTTTTGGTCGTTGCGTTCCAAAAACGAAT
CGAGGTCTGTTGTTTTGTTTTGTTTTTTATGTTACTTTTTATCTCCCGTG
TCTTCTGAATTTTCACCAACCCCGAGCATTCAAGTGAATCAAGTCGAATA
GAATCGGAGGGTGACGGTTTCACATTTTTTTTCGGAGGACAGGAGGGGAT
ATTCATCGCTCACGGTAGCCCGCTACGAACCTTGGTTTGCATTTCTTTTC
TTTCAAGTATAACAATAGGCTTGTATGTCTTAGCCTTCAAACAAACGAAA
TATTAACCTTCATATTTTCTCAGTTTTTTGTTATTTTTTGCCGAGTACAT
ACCAATGAACCTGTAGAGCTATCCTTCAGTTTTTATTTTGAAATATATGA
ACTCATTGAAACCCTCCAAACATCCAGACTTTTTTTGCACCGTAGGGATG
CAGTACAGGGCACTTTGGGTGTAATATCATTTTCTGCGCATCATAATCCG
TCATATTACATCTTTATTCATCAAAATCCGTCACAATACATCAGTATTCA
TCATAGTCCGCCATATTCTGTCATATTCCATCACATTTCATCATAACCCA
TAGACTTATTATTAGGAGTAATAATAATCGTGAGCAGCTTATACTGTAGT
GTAAGTGCATCATACACATGCCGTTGTGTATGGGATATACCTGCGGCGCT
TATGCTTTCGAGACGATTTGCGGGTAATATATACGTAGTATATATTATGG
TATAGTATATGTAATATAGTATATAGGTTAGTATAGTTGATAGCGCCCGC
TGAATGTGCACCATTTGGTTGCTGTACCCGGTATGCCATATCCAATGTAT
AGTTTCTTATTGACCCATCCCATTCCGTCCCGTCCCGTCGCCGGTTTGGC
CTATTAATAATGCTAAAAACTAGTAATAGCACCAGTACCTTATATGTACG
AGCATCATCCTCGTAAAACGCAGCCTTGTCGGCGCAAACCCGATACTCTA
AATAGCATATAGTATCGCTCCCTCCCGGTTAATATCATTGTTGAGATGAT
ATTCGTGTTCTAATATAACTCTTAGTATACAACATGCCTTTAAAATAAAT
ACACCCCGCCCCTCCCCCCTCTACTCCCCTCTACTCCATTCTGACCGGAC
GGTGTCATGGTGTGTGACGGTGTATGACGGTGTCAGGAACGAAGACCGAA
GCAGAGAAGTTTGCGGGGGGGCACAAGACCACCACGGTGGAGGCGTACAT
CTCGGGCTCGGGTAGGGCCATTCAGGGAGCAACTAGCCACCACCTGGGGC
AAAACTTTGGGAAAATGTTTAAGTGAGCTCCTTCTCTATCTCTCCCTCTA
TCTTACGTCCCTCTTGTATTTATAGTATGTGATGTGTAGCGTATACCTGC
CAATGTCACCGTCAGAGGCCCGATGAGCGGGAGGGGCGGGGGGAAGGAGG
AATTGTCGTCGCTGCTCTGTTCTTCGGTGTATTTTTGGTCGTAGTTAGTG
TTGATGTTGATGTTGATGCTGACGGTCAACACATGACAGATAAAAGGTAG
GTATAGCGTATAGGGCAGGCCGCGTCCGTCCGTCTCCAACCTCAGTTGGC
CCAACGATGCCGTCCAAACCACGTGGAGATCTTTCCCCTGCTGGAATTCT
GCCGTTGGTACTTTACGAACTCCGTCTTCCCTCCCTCCCTCCCTCAGGAT
CAACTATGAGGATGATAAGGGGGAGATGGCCATCCCCTGGCAGACCAGCT
GGGGTCTCACCACCAGGTTAGGTTAG
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Coding sequence (CDS) from alignment at H-elongata_contig47589:1792..3817+

>mRNA_H-elongata_contig47589.11889.1 ID=mRNA_H-elongata_contig47589.11889.1|Name=mRNA_H-elongata_contig47589.11889.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=768bp|location=Sequence derived from alignment at H-elongata_contig47589:1792..3817+ (Himanthalia elongata Himel1 dioecious)
AGATGGGAGTTCAAGGACCCGACGCCGTTCCTCCGCACTCGGGAGTTCCT
GTGGCAGGAGGGGCATACGGCTCACGCGAGCTACGCCGACGCGGACACGA
TGGTGATGCAGGCTTTAGATCTATACCGCAGGGTGTACGAGGAGCTACTC
GCGGTTCCTGTCATCTTGGAGATGGGAGTTCAAGGACCCGACGCCGTTCC
TCCGCACTCGGGAGTTCCTGTGGCAGGAGGGGCATACGGCTCACGCGAGC
TACGCCGACGCGGACACGATGGTGATGCAGGCTTTAGATCTATACCGCAG
GGTGTACGAGGAGCTACTCGCGGTTCCTGTCATCTTGGGAACGAAGACCG
AAGCAGAGAAGTTTGCGGGGGGGCACAAGACCACCACGGTGGAGGCGTAC
ATCTCGGGCTCGGGTAGGGCCATTCAGGGAGCAACTAGCCACCACCTGGG
GCAAAACTTTGGGAAAATGTTTAAGAACGAAGACCGAAGCAGAGAAGTTT
GCGGGGGGGCACAAGACCACCACGGTGGAGGCGTACATCTCGGGCTCGGG
TAGGGCCATTCAGGGAGCAACTAGCCACCACCTGGGGCAAAACTTTGGGA
AAATGTTTAAGATCAACTATGAGGATGATAAGGGGGAGATGGCCATCCCC
TGGCAGACCAGCTGGGGTCTCACCACCAGGTTAGGTTAGGATCAACTATG
AGGATGATAAGGGGGAGATGGCCATCCCCTGGCAGACCAGCTGGGGTCTC
ACCACCAGGTTAGGTTAG
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