prot_H-elongata_contig114741.1174.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig114741.1174.1
Unique Nameprot_H-elongata_contig114741.1174.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length46
Homology
BLAST of mRNA_H-elongata_contig114741.1174.1 vs. uniprot
Match: A0A6H5KEF6_9PHAE (2-isopropylmalate synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEF6_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 5.650e-16
Identity = 36/40 (90.00%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 QVYSIAIEAGATTINVPDTVGYTTPKEFIGLMHHLRKTVR 40
            +VYS+AIEAGATTINVPDTVGYTTPKEF+GLMHHLR TVR
Sbjct:  279 EVYSVAIEAGATTINVPDTVGYTTPKEFMGLMHHLRGTVR 318          
BLAST of mRNA_H-elongata_contig114741.1174.1 vs. uniprot
Match: D8LHU2_ECTSI (2-isopropylmalate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU2_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 7.640e-16
Identity = 36/40 (90.00%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 QVYSIAIEAGATTINVPDTVGYTTPKEFIGLMHHLRKTVR 40
            +VYS+AIEAGATTINVPDTVGYTTPKEF+GLMHHLR TVR
Sbjct:  135 KVYSVAIEAGATTINVPDTVGYTTPKEFMGLMHHLRGTVR 174          
BLAST of mRNA_H-elongata_contig114741.1174.1 vs. uniprot
Match: A0A6V1NWK8_HETAK (2-isopropylmalate synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NWK8_HETAK)

HSP 1 Score: 67.8 bits (164), Expect = 4.810e-12
Identity = 32/40 (80.00%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 QVYSIAIEAGATTINVPDTVGYTTPKEFIGLMHHLRKTVR 40
            +VYS+AIEAGATTINVPDTVGYTTP EF  LMH LR  VR
Sbjct:  231 EVYSVAIEAGATTINVPDTVGYTTPDEFYALMHKLRAGVR 270          
BLAST of mRNA_H-elongata_contig114741.1174.1 vs. uniprot
Match: R7QCD2_CHOCR (2-isopropylmalate synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCD2_CHOCR)

HSP 1 Score: 63.5 bits (153), Expect = 1.500e-10
Identity = 29/40 (72.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 QVYSIAIEAGATTINVPDTVGYTTPKEFIGLMHHLRKTVR 40
            +V+S AIEAGATTINVPDTVGYTTP EF  L+ +LR+ VR
Sbjct:  184 EVFSAAIEAGATTINVPDTVGYTTPSEFASLIRYLRRNVR 223          
BLAST of mRNA_H-elongata_contig114741.1174.1 vs. uniprot
Match: A0A7S2UVN2_9STRA (2-isopropylmalate synthase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVN2_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.500e-10
Identity = 28/40 (70.00%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 QVYSIAIEAGATTINVPDTVGYTTPKEFIGLMHHLRKTVR 40
            QVYS+A+EAGATT+NVPDTVGYTTP+EF  L+  LR+ V+
Sbjct:  266 QVYSVAVEAGATTLNVPDTVGYTTPQEFFQLIQKLRRGVK 305          
BLAST of mRNA_H-elongata_contig114741.1174.1 vs. uniprot
Match: UPI001E1D3CFD (LOW QUALITY PROTEIN: 2-isopropylmalate synthase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3CFD)

HSP 1 Score: 62.4 bits (150), Expect = 3.820e-10
Identity = 28/39 (71.79%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    1 QVYSIAIEAGATTINVPDTVGYTTPKEFIGLMHHLRKTV 39
            QV+S+AI AGATTINVPDTVGYTTP+EF  L+ +LR T+
Sbjct:  368 QVFSVAIAAGATTINVPDTVGYTTPREFASLIRYLRATL 406          
BLAST of mRNA_H-elongata_contig114741.1174.1 vs. uniprot
Match: W7TP25_9STRA (2-isopropylmalate synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP25_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 5.220e-10
Identity = 28/40 (70.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    1 QVYSIAIEAGATTINVPDTVGYTTPKEFIGLMHHLRKTVR 40
            QVYS+A+EAGATT+NVPDTVGYTTP EF  L+  LR  V+
Sbjct:  340 QVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRANVK 379          
BLAST of mRNA_H-elongata_contig114741.1174.1 vs. uniprot
Match: A0A7V9KG99_9CHLR (2-isopropylmalate synthase (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9KG99_9CHLR)

HSP 1 Score: 61.6 bits (148), Expect = 7.100e-10
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 0
Query:    1 QVYSIAIEAGATTINVPDTVGYTTPKEFIGLMHHLRKTV 39
            QV++ AIEAGATT+NVPDTVGYTTP E+  LM HLR  V
Sbjct:  163 QVFTAAIEAGATTLNVPDTVGYTTPNEYAALMDHLRAQV 201          
BLAST of mRNA_H-elongata_contig114741.1174.1 vs. uniprot
Match: A0A535IMC5_9CHLR (2-isopropylmalate synthase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535IMC5_9CHLR)

HSP 1 Score: 61.2 bits (147), Expect = 9.760e-10
Identity = 27/39 (69.23%), Postives = 32/39 (82.05%), Query Frame = 0
Query:    1 QVYSIAIEAGATTINVPDTVGYTTPKEFIGLMHHLRKTV 39
             ++ IAI AGATTINVPDTVGYTTP+EF  L+HHL+  V
Sbjct:  152 SIFEIAIAAGATTINVPDTVGYTTPEEFAALIHHLKAHV 190          
BLAST of mRNA_H-elongata_contig114741.1174.1 vs. uniprot
Match: A0A4D9D6G1_9STRA (2-isopropylmalate synthase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6G1_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 9.760e-10
Identity = 28/40 (70.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    1 QVYSIAIEAGATTINVPDTVGYTTPKEFIGLMHHLRKTVR 40
            QVYS+A+EAGATT+NVPDTVGYTTP EF  L+  LR  V+
Sbjct:  192 QVYSVAVEAGATTLNVPDTVGYTTPSEFKALIRGLRAHVK 231          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114741.1174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEF6_9PHAE5.650e-1690.002-isopropylmalate synthase n=1 Tax=Ectocarpus sp. ... [more]
D8LHU2_ECTSI7.640e-1690.002-isopropylmalate synthase n=1 Tax=Ectocarpus sili... [more]
A0A6V1NWK8_HETAK4.810e-1280.002-isopropylmalate synthase n=1 Tax=Heterosigma aka... [more]
R7QCD2_CHOCR1.500e-1072.502-isopropylmalate synthase n=1 Tax=Chondrus crispu... [more]
A0A7S2UVN2_9STRA1.500e-1070.002-isopropylmalate synthase (Fragment) n=1 Tax=Fibr... [more]
UPI001E1D3CFD3.820e-1071.79LOW QUALITY PROTEIN: 2-isopropylmalate synthase-li... [more]
W7TP25_9STRA5.220e-1070.002-isopropylmalate synthase n=1 Tax=Nannochloropsis... [more]
A0A7V9KG99_9CHLR7.100e-1071.792-isopropylmalate synthase (Fragment) n=1 Tax=Chlo... [more]
A0A535IMC5_9CHLR9.760e-1069.232-isopropylmalate synthase n=1 Tax=Chloroflexi bac... [more]
A0A4D9D6G1_9STRA9.760e-1070.002-isopropylmalate synthase n=1 Tax=Nannochloropsis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000891Pyruvate carboxyltransferasePFAMPF00682HMGL-likecoord: 1..40
e-value: 1.4E-7
score: 31.3
IPR000891Pyruvate carboxyltransferasePROSITEPS50991PYR_CTcoord: 1..45
score: 11.384
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..43
e-value: 2.0E-9
score: 39.2
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 2..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig114741contigH-elongata_contig114741:404..541 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig114741.1174.1mRNA_H-elongata_contig114741.1174.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig114741 404..541 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig114741.1174.1 ID=prot_H-elongata_contig114741.1174.1|Name=mRNA_H-elongata_contig114741.1174.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=46bp
QVYSIAIEAGATTINVPDTVGYTTPKEFIGLMHHLRKTVRCLLCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000891PYR_CT
IPR013785Aldolase_TIM