prot_H-elongata_contig4614.11694.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig4614.11694.1
Unique Nameprot_H-elongata_contig4614.11694.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length449
Homology
BLAST of mRNA_H-elongata_contig4614.11694.1 vs. uniprot
Match: D7FJZ9_ECTSI (Putative c-myb-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ9_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 2.200e-39
Identity = 77/89 (86.52%), Postives = 82/89 (92.13%), Query Frame = 0
Query:  361 SNGGRGSGDGGIPFMLDPKLWIVVERRAVCSAKQCAYRSEDDHRARRRHYHALCSHVHQNGERKGMRFQHHQLEKVQKHQRAHQVSAKQ 449
            ++GGRG      PFMLDPKLW VVERRAVC+AKQCAYRSE+DHRARRRHYHALC+HVHQNGERKGMRFQHHQLEKVQKHQRAHQVSAKQ
Sbjct:  101 TSGGRGGKKTKTPFMLDPKLWTVVERRAVCTAKQCAYRSEEDHRARRRHYHALCNHVHQNGERKGMRFQHHQLEKVQKHQRAHQVSAKQ 189          
BLAST of mRNA_H-elongata_contig4614.11694.1 vs. uniprot
Match: A0A6H5JMK3_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK3_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 3.830e-34
Identity = 71/80 (88.75%), Postives = 74/80 (92.50%), Query Frame = 0
Query:  365 RGSGDGGIPFMLDPKLWIVVERRAVCSAKQCAYRSEDDHRARRRHYHALCSHVHQNGERKGMRFQHHQLEKVQKHQRAHQ 444
            RGS     PFMLDPKLW VVERRAVC+AKQCAYRSE+DHRARRRHYHALC+HVHQNGERKGMRFQHHQLEKVQKHQRAHQ
Sbjct:  848 RGSKKTKTPFMLDPKLWTVVERRAVCTAKQCAYRSEEDHRARRRHYHALCNHVHQNGERKGMRFQHHQLEKVQKHQRAHQ 927          
BLAST of mRNA_H-elongata_contig4614.11694.1 vs. uniprot
Match: D7G0Z5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z5_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 4.620e-17
Identity = 44/70 (62.86%), Postives = 52/70 (74.29%), Query Frame = 0
Query:  374 FMLDPKLWIVVERRAVCSAKQCAYRSEDDHRARRRHYHALCSHVHQNGERKGMRFQHHQLEKVQKHQRAH 443
            F LD  LW VV RR +C A+QC YR+     + R+HYHA CSHVHQ G +KGMRF HHQLEKV+KHQR+H
Sbjct:  280 FELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSH 349          
BLAST of mRNA_H-elongata_contig4614.11694.1 vs. uniprot
Match: A0A6H5L2W7_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W7_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 5.090e-17
Identity = 44/70 (62.86%), Postives = 52/70 (74.29%), Query Frame = 0
Query:  374 FMLDPKLWIVVERRAVCSAKQCAYRSEDDHRARRRHYHALCSHVHQNGERKGMRFQHHQLEKVQKHQRAH 443
            F LD  LW VV RR +C A+QC YR+     + R+HYHA CSHVHQ G +KGMRF HHQLEKV+KHQR+H
Sbjct:  658 FELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSH 727          
BLAST of mRNA_H-elongata_contig4614.11694.1 vs. uniprot
Match: A0A6H5KQ17_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ17_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.990e-14
Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = 0
Query:  376 LDPKLWIVVERRAVCSAKQCAYRSEDDHRARRRHYHALCSHVHQNGERKGMRFQHHQLEKVQKHQRAHQVSA 447
            LD  LW+VVE+ +VC+++ C YR +    A RRHYH+ C+H H  GE+KGM F HHQLEKVQKHQR+H+  A
Sbjct:  210 LDKDLWVVVEKGSVCTSRDCTYR-DAARIASRRHYHSNCTHTHNGGEKKGMAFHHHQLEKVQKHQRSHKREA 280          
BLAST of mRNA_H-elongata_contig4614.11694.1 vs. uniprot
Match: D8LH85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH85_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 4.510e-14
Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = 0
Query:  376 LDPKLWIVVERRAVCSAKQCAYRSEDDHRARRRHYHALCSHVHQNGERKGMRFQHHQLEKVQKHQRAHQVSA 447
            LD  LW+VVE+ +VC+++ C YR +    A RRHYH+ C+H H  GE+KGM F HHQLEKVQKHQR+H+  A
Sbjct:  339 LDKDLWVVVEKGSVCTSRDCTYR-DAARIASRRHYHSNCTHTHNGGEKKGMAFHHHQLEKVQKHQRSHKREA 409          
BLAST of mRNA_H-elongata_contig4614.11694.1 vs. uniprot
Match: D8LCS2_ECTSI (Myb-like DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS2_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 2.970e-12
Identity = 38/70 (54.29%), Postives = 47/70 (67.14%), Query Frame = 0
Query:  374 FMLDPKLWIVVERRAVCSAKQCAYRSEDDHRARRRHYHALCSHVHQNGERKGMRFQHHQLEKVQKHQRAH 443
             +LD  LWIV ER   CS+ +C Y+ +    + RRHYHA C H H+ G + GM F HHQLEK+QKHQRAH
Sbjct:  564 MVLDADLWIVRERGEHCSSNECIYKDKTTGISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAH 633          
BLAST of mRNA_H-elongata_contig4614.11694.1 vs. uniprot
Match: A0A6H5JLY2_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLY2_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 3.120e-12
Identity = 38/70 (54.29%), Postives = 47/70 (67.14%), Query Frame = 0
Query:  374 FMLDPKLWIVVERRAVCSAKQCAYRSEDDHRARRRHYHALCSHVHQNGERKGMRFQHHQLEKVQKHQRAH 443
             +LD  LWIV ER   CS+ +C Y+ +    + RRHYHA C H H+ G + GM F HHQLEK+QKHQRAH
Sbjct:  550 MVLDADLWIVRERGEHCSSNECIYKDKTTGISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAH 619          
BLAST of mRNA_H-elongata_contig4614.11694.1 vs. uniprot
Match: A0A836CC17_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC17_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 4.200e-11
Identity = 36/68 (52.94%), Postives = 42/68 (61.76%), Query Frame = 0
Query:  376 LDPKLWIVVERRAVCSAKQCAYRSEDDHRARRRHYHALCSHVHQNGERKGMRFQHHQLEKVQKHQRAH 443
            +DP LW+ V     C A QC  R+     A RRHYHA C H H  G + GMRF HHQLEK++KHQR H
Sbjct:    1 IDPALWVRVNLGDRCEAAQCTLRAPATRLATRRHYHAKCDHRHGAGAKAGMRFHHHQLEKIRKHQRVH 68          
BLAST of mRNA_H-elongata_contig4614.11694.1 vs. uniprot
Match: A0A835ZA42_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA42_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 5.330e-10
Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 0
Query:  387 RAVCSAKQCAYRSEDDHRARRRHYHALCSHVHQNGERKGMRFQHHQLEKVQKHQRAHQVSA 447
            R  C A+ C  R+     A RRHYHA C HVH +G + GMRF HHQLEK++KHQRAH+ S+
Sbjct:    1 RCRCEAQDCTMRAAGTRLATRRHYHATCGHVHASGAKAGMRFHHHQLEKIRKHQRAHKRSS 61          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig4614.11694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FJZ9_ECTSI2.200e-3986.52Putative c-myb-like transcription factor n=1 Tax=E... [more]
A0A6H5JMK3_9PHAE3.830e-3488.75MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7G0Z5_ECTSI4.620e-1762.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2W7_9PHAE5.090e-1762.86MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A6H5KQ17_9PHAE2.990e-1456.94MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LH85_ECTSI4.510e-1456.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCS2_ECTSI2.970e-1254.29Myb-like DNA-binding domain containing protein n=1... [more]
A0A6H5JLY2_9PHAE3.120e-1254.29MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A836CC17_9STRA4.200e-1152.94Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZA42_9STRA5.330e-1055.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..449

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig4614contigH-elongata_contig4614:6915..11923 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig4614.11694.1mRNA_H-elongata_contig4614.11694.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig4614 6675..11923 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig4614.11694.1 ID=prot_H-elongata_contig4614.11694.1|Name=mRNA_H-elongata_contig4614.11694.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=449bp
MSTSAVASATGLAAQAANVAVAIQQATGPFSAHHSGSSYARQWQCANDPS
DGATEMPTSDANSLSGGSGRGENGGTGGGLGGSRGGICSLDYEHYPEESR
TAWPAVAISSWQSQASGANGRANSGDVTQMHPRFVTKEECVSGSRHPRGD
ADWLVPLGTVDEERTPGVQQMHGLANNSPYARSADHDLGGGGGKRIKIIG
AADVSQGWINLPHGMTTTASVGISTAASSNTTRTRSTGSINGIGISNGWR
SSDLGIRATGGNATATENSPSPGISTEVPDSIPCRYPVKAQISASAAVTA
ARTALGVSPPQGKRRNSNDDHSAGGVAQNGGNGNGDSSPEWVEREEPEEE
MKTKPRNNGDSNGGRGSGDGGIPFMLDPKLWIVVERRAVCSAKQCAYRSE
DDHRARRRHYHALCSHVHQNGERKGMRFQHHQLEKVQKHQRAHQVSAKQ
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