prot_H-elongata_contig114552.1159.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig114552.1159.1
Unique Nameprot_H-elongata_contig114552.1159.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length59
Homology
BLAST of mRNA_H-elongata_contig114552.1159.1 vs. uniprot
Match: D8LRQ0_ECTSI (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ0_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 5.130e-25
Identity = 52/57 (91.23%), Postives = 56/57 (98.25%), Query Frame = 0
Query:    1 MVEFIDKQVTELKKLWYNKRQLAFQGLNLAMIVLSALMIWKTLMVVTKSESPVVVVL 57
            MV+F+DKQV ELKKLW+NKRQLAFQGLNLAMIVLSALMIWK+LMVVTKSESPVVVVL
Sbjct:    1 MVDFVDKQVDELKKLWHNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVL 57          
BLAST of mRNA_H-elongata_contig114552.1159.1 vs. uniprot
Match: A0A835Z4U9_9STRA (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A835Z4U9_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 5.160e-22
Identity = 48/56 (85.71%), Postives = 53/56 (94.64%), Query Frame = 0
Query:    2 VEFIDKQVTELKKLWYNKRQLAFQGLNLAMIVLSALMIWKTLMVVTKSESPVVVVL 57
            ++ +DKQV ELKKLW NKRQLAFQGLNLAMIVLSALMIWK+LMVVT+SESPVVVVL
Sbjct:    1 MDIVDKQVVELKKLWKNKRQLAFQGLNLAMIVLSALMIWKSLMVVTRSESPVVVVL 56          
BLAST of mRNA_H-elongata_contig114552.1159.1 vs. uniprot
Match: A0A6U5HKR9_9STRA (Signal peptidase I n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5HKR9_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.360e-20
Identity = 47/57 (82.46%), Postives = 49/57 (85.96%), Query Frame = 0
Query:    1 MVEFIDKQVTELKKLWYNKRQLAFQGLNLAMIVLSALMIWKTLMVVTKSESPVVVVL 57
            M + IDKQ+ ELKKLW NKRQLAFQ LNLAMIV SALMIWK LM VTKSESPVVVVL
Sbjct:    1 MKDIIDKQIVELKKLWLNKRQLAFQALNLAMIVFSALMIWKGLMCVTKSESPVVVVL 57          
BLAST of mRNA_H-elongata_contig114552.1159.1 vs. uniprot
Match: A0A482SN16_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SN16_9ARCH)

HSP 1 Score: 80.9 bits (198), Expect = 5.450e-19
Identity = 44/57 (77.19%), Postives = 48/57 (84.21%), Query Frame = 0
Query:    2 VEFIDKQVTELKKLWYNKRQLAFQGLNLAMIVLSALMIWKTLMVVTKSESPVVVVLR 58
            ++ +  QV ELKKLW NKR L+FQ LNLAMIV SALMIWK LMVVTKSESPVVVVLR
Sbjct:    1 MDIVKSQVMELKKLWKNKRNLSFQILNLAMIVFSALMIWKGLMVVTKSESPVVVVLR 57          
BLAST of mRNA_H-elongata_contig114552.1159.1 vs. uniprot
Match: A0A7S1U989_9STRA (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7S1U989_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.000e-18
Identity = 45/57 (78.95%), Postives = 48/57 (84.21%), Query Frame = 0
Query:    1 MVEFIDKQVTELKKLWYNKRQLAFQGLNLAMIVLSALMIWKTLMVVTKSESPVVVVL 57
            M E +  QV ELKKLW NKRQL FQ LNLAMIV SALMIWK+LMV+TKSESPVVVVL
Sbjct:    1 MWEIVQMQVFELKKLWANKRQLLFQSLNLAMIVFSALMIWKSLMVLTKSESPVVVVL 57          
BLAST of mRNA_H-elongata_contig114552.1159.1 vs. uniprot
Match: A0A7S2RVP6_9STRA (Signal peptidase complex catalytic subunit SEC11C n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVP6_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 5.730e-18
Identity = 43/56 (76.79%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    2 VEFIDKQVTELKKLWYNKRQLAFQGLNLAMIVLSALMIWKTLMVVTKSESPVVVVL 57
            +E ID Q++ELKKLW NKRQ  FQ LNLAMIV SALMIWK LM +TKSESPVVVVL
Sbjct:    1 MEMIDAQISELKKLWRNKRQFLFQALNLAMIVFSALMIWKGLMFITKSESPVVVVL 56          
BLAST of mRNA_H-elongata_contig114552.1159.1 vs. uniprot
Match: A0A6V1QND9_HETAK (Signal peptidase complex catalytic subunit SEC11C n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QND9_HETAK)

HSP 1 Score: 81.6 bits (200), Expect = 5.980e-18
Identity = 44/57 (77.19%), Postives = 50/57 (87.72%), Query Frame = 0
Query:    1 MVEFIDKQVTELKKLWYNKRQLAFQGLNLAMIVLSALMIWKTLMVVTKSESPVVVVL 57
            M+E I++Q+ ELKKLW NKR LAFQ LNLAMIV SALMIWK+LMV T+SESPVVVVL
Sbjct:    1 MMELIEQQLDELKKLWKNKRALAFQALNLAMIVFSALMIWKSLMVWTQSESPVVVVL 57          
BLAST of mRNA_H-elongata_contig114552.1159.1 vs. uniprot
Match: A0A7S2URX0_9STRA (Signal peptidase complex catalytic subunit SEC11A n=3 Tax=Coscinodiscophyceae TaxID=33836 RepID=A0A7S2URX0_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.350e-17
Identity = 45/55 (81.82%), Postives = 47/55 (85.45%), Query Frame = 0
Query:    3 EFIDKQVTELKKLWYNKRQLAFQGLNLAMIVLSALMIWKTLMVVTKSESPVVVVL 57
            + IDKQV ELKKLW NKRQL FQ LNLAMIV SALMIWK LM +TKSESPVVVVL
Sbjct:   26 DMIDKQVLELKKLWANKRQLMFQLLNLAMIVFSALMIWKGLMFMTKSESPVVVVL 80          
BLAST of mRNA_H-elongata_contig114552.1159.1 vs. uniprot
Match: B7GDX7_PHATC (Signal peptidase I n=5 Tax=Naviculales TaxID=38748 RepID=B7GDX7_PHATC)

HSP 1 Score: 80.5 bits (197), Expect = 1.760e-17
Identity = 44/55 (80.00%), Postives = 47/55 (85.45%), Query Frame = 0
Query:    3 EFIDKQVTELKKLWYNKRQLAFQGLNLAMIVLSALMIWKTLMVVTKSESPVVVVL 57
            + +DKQV ELKKLW NKRQL FQ LNLAMIV SALMIWK LM VT+SESPVVVVL
Sbjct:    4 DILDKQVFELKKLWANKRQLTFQVLNLAMIVFSALMIWKGLMFVTQSESPVVVVL 58          
BLAST of mRNA_H-elongata_contig114552.1159.1 vs. uniprot
Match: A0A7R9WQ46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WQ46_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.960e-17
Identity = 43/53 (81.13%), Postives = 45/53 (84.91%), Query Frame = 0
Query:    3 EFIDKQVTELKKLWYNKRQLAFQGLNLAMIVLSALMIWKTLMVVTKSESPVVV 55
            + IDKQV ELKKLW NKRQL FQ LNLAMIV SALMIWK LM +TKSESPVVV
Sbjct:   72 DMIDKQVLELKKLWANKRQLLFQLLNLAMIVFSALMIWKGLMFMTKSESPVVV 124          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114552.1159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRQ0_ECTSI5.130e-2591.23Signal peptidase complex catalytic subunit SEC11C ... [more]
A0A835Z4U9_9STRA5.160e-2285.71Signal peptidase complex catalytic subunit SEC11C ... [more]
A0A6U5HKR9_9STRA3.360e-2082.46Signal peptidase I n=1 Tax=Corethron hystrix TaxID... [more]
A0A482SN16_9ARCH5.450e-1977.19Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S1U989_9STRA3.000e-1878.95Signal peptidase complex catalytic subunit SEC11C ... [more]
A0A7S2RVP6_9STRA5.730e-1876.79Signal peptidase complex catalytic subunit SEC11C ... [more]
A0A6V1QND9_HETAK5.980e-1877.19Signal peptidase complex catalytic subunit SEC11C ... [more]
A0A7S2URX0_9STRA1.350e-1781.82Signal peptidase complex catalytic subunit SEC11A ... [more]
B7GDX7_PHATC1.760e-1780.00Signal peptidase I n=5 Tax=Naviculales TaxID=38748... [more]
A0A7R9WQ46_9STRA1.960e-1781.13Hypothetical protein (Fragment) n=1 Tax=Craspedost... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001733Peptidase S26BPANTHERPTHR10806SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11coord: 16..57
NoneNo IPR availablePANTHERPTHR10806:SF28SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11B-RELATEDcoord: 16..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..21
NoneNo IPR availableTMHMMTMhelixcoord: 21..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig114552contigH-elongata_contig114552:518..694 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig114552.1159.1mRNA_H-elongata_contig114552.1159.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig114552 518..694 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig114552.1159.1 ID=prot_H-elongata_contig114552.1159.1|Name=mRNA_H-elongata_contig114552.1159.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp
MVEFIDKQVTELKKLWYNKRQLAFQGLNLAMIVLSALMIWKTLMVVTKSE
SPVVVVLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001733Peptidase_S26B