mRNA_H-elongata_contig114493.1152.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig114493.1152.1 vs. uniprot
Match: D7G0I1_ECTSI (Mitogen-activated protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0I1_ECTSI) HSP 1 Score: 198 bits (504), Expect = 1.590e-58 Identity = 101/128 (78.91%), Postives = 104/128 (81.25%), Query Frame = 1
Query: 1 DLHHIIYSGQNLKEAHLQFFLYQILCGLHYMHSARVIHRDLKPANVLVNTTCDLKLCDFGLARSLGKV---SSCSPSGS---------------GVAPDVEDSDTGNEVKLTEYVVTRWWRAPEVFLE 330
DLHHIIYSGQNLK+AHLQFFLYQILCGLHYMHSARVIHRDLKPANVLVNTTCDLKLCDFGLARSLGK + SP GS GVAPDVED D+G EVKLTEYVVTRWWRAPEVFLE
Sbjct: 196 DLHHIIYSGQNLKQAHLQFFLYQILCGLHYMHSARVIHRDLKPANVLVNTTCDLKLCDFGLARSLGKAPASETTSPGGSXXXXXXXXXXXXXXXGVAPDVEDGDSGGEVKLTEYVVTRWWRAPEVFLE 323
BLAST of mRNA_H-elongata_contig114493.1152.1 vs. uniprot
Match: A0A6H5JCV3_9PHAE (Mitogen-activated protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV3_9PHAE) HSP 1 Score: 193 bits (491), Expect = 1.010e-55 Identity = 98/131 (74.81%), Postives = 104/131 (79.39%), Query Frame = 1
Query: 1 DLHHIIYSGQNLKEAHLQFFLYQILCGLHYMHSARVIHRDLKPANVLVNTTCDLKLCDFGLARSLGKVSSC---SPSGSG------------------VAPDVEDSDTGNEVKLTEYVVTRWWRAPEVFLE 330
DLHHIIYSGQNLK+AHLQFFLYQILCGLHYMHSARVIHRDLKPANVLVNTTC+LKLCDFGLARSLG+ + SP GSG V+PDVED D+G EVKLTEYVVTRWWRAPEVFLE
Sbjct: 214 DLHHIIYSGQNLKQAHLQFFLYQILCGLHYMHSARVIHRDLKPANVLVNTTCELKLCDFGLARSLGRAPAAETTSPGGSGRDXXXXXXXXXXXXXXXGVSPDVEDGDSGGEVKLTEYVVTRWWRAPEVFLE 344
BLAST of mRNA_H-elongata_contig114493.1152.1 vs. uniprot
Match: A0A835ZKF4_9STRA (Mitogen-activated protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKF4_9STRA) HSP 1 Score: 162 bits (411), Expect = 8.440e-44 Identity = 81/112 (72.32%), Postives = 90/112 (80.36%), Query Frame = 1
Query: 1 DLHHIIYSGQNLKEAHLQFFLYQILCGLHYMHSARVIHRDLKPANVLVNTTCDLKLCDFGLARSLGKVSSCSPSGSGVAPDVEDSDTGNEVKLTEYVVTRWWRAPEVFLEGE 336
DLHHIIYSGQ+LKEAH+QFF+YQ+LCGL YMHSA+VIHRDLKPANVLVNTTCDLKLCDFGLARSL S+ A D + G K+TEYVVTRWWRAPEVFLE +
Sbjct: 213 DLHHIIYSGQHLKEAHMQFFMYQMLCGLKYMHSAQVIHRDLKPANVLVNTTCDLKLCDFGLARSLLNTSA--------AATQPDDEPGG--KMTEYVVTRWWRAPEVFLEAK 314
BLAST of mRNA_H-elongata_contig114493.1152.1 vs. uniprot
Match: A0A835ZD69_9STRA (Mitogen-activated protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD69_9STRA) HSP 1 Score: 159 bits (403), Expect = 6.690e-43 Identity = 77/112 (68.75%), Postives = 87/112 (77.68%), Query Frame = 1
Query: 1 DLHHIIYSGQNLKEAHLQFFLYQILCGLHYMHSARVIHRDLKPANVLVNTTCDLKLCDFGLARSLGKVSSCSPSGSGVAPDVEDSDTGNEVKLTEYVVTRWWRAPEVFLEGE 336
DLHHIIYSGQ+LKEAH+QFF+YQ+LCGL YMHSA+VIHRDLKPANVL+NT CDLKLCDFGLARSL + A D D ++TEYVVTRWWRAPEVFLE +
Sbjct: 211 DLHHIIYSGQHLKEAHMQFFMYQLLCGLKYMHSAQVIHRDLKPANVLINTNCDLKLCDFGLARSLFNTN---------ADDTLSEDDEPGGRMTEYVVTRWWRAPEVFLEAK 313
BLAST of mRNA_H-elongata_contig114493.1152.1 vs. uniprot
Match: A0A7S1U762_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U762_9STRA) HSP 1 Score: 124 bits (312), Expect = 7.150e-34 Identity = 60/109 (55.05%), Postives = 77/109 (70.64%), Query Frame = 1
Query: 1 DLHHIIYSGQNLKEAHLQFFLYQILCGLHYMHSARVIHRDLKPANVLVNTTCDLKLCDFGLARSLGKVSSCSPSGSGVAPDVEDSDTGNEVKLTEYVVTRWWRAPEVFL 327
DLH +IYS Q+L + H+++FLYQILCGL Y+HSA V+HRDLKP+N+L+N+ CDLKLCDFGL+R+ V ED + LTEYVVTRW+RAPE+ L
Sbjct: 4 DLHRVIYSRQSLTDDHIKYFLYQILCGLRYIHSAEVLHRDLKPSNILLNSNCDLKLCDFGLSRT-------------VTVAAEDDNL-----LTEYVVTRWYRAPEIML 94
BLAST of mRNA_H-elongata_contig114493.1152.1 vs. uniprot
Match: A0A7R9W1S5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W1S5_9STRA) HSP 1 Score: 122 bits (307), Expect = 5.190e-33 Identity = 63/109 (57.80%), Postives = 77/109 (70.64%), Query Frame = 1
Query: 1 DLHHIIYSGQNLKEAHLQFFLYQILCGLHYMHSARVIHRDLKPANVLVNTTCDLKLCDFGLARSLGKVSSCSPSGSGVAPDVEDSDTGNEVKLTEYVVTRWWRAPEVFL 327
DLH IIYS Q L H+++FLYQIL L Y+HSA V+HRDLKP+N+LVN+ CDLK+CDFGLAR GV P+ ED +G + LTEYVVTRW+RAPE+ L
Sbjct: 18 DLHRIIYSKQPLSIDHVRYFLYQILRALKYIHSADVLHRDLKPSNLLVNSNCDLKVCDFGLAR-------------GVLPE-EDVRSGGSMLLTEYVVTRWYRAPEIML 112
BLAST of mRNA_H-elongata_contig114493.1152.1 vs. uniprot
Match: W7TT92_9STRA (Mitogen-activated protein kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TT92_9STRA) HSP 1 Score: 132 bits (331), Expect = 8.570e-33 Identity = 61/112 (54.46%), Postives = 77/112 (68.75%), Query Frame = 1
Query: 1 DLHHIIYSGQNLKEAHLQFFLYQILCGLHYMHSARVIHRDLKPANVLVNTTCDLKLCDFGLARSLGKVSSCSPSGSGVAPDVEDSDTGNEVKLTEYVVTRWWRAPEVFLEGE 336
DLH +IYSGQ L E H+QFF+YQ++CGL ++HSA VIHRDLKP+N+L+N CDLK+CDFGLAR +G D+ T LTEYVVTRW+RAPE+ L +
Sbjct: 217 DLHRVIYSGQTLTEEHIQFFMYQLMCGLKHIHSANVIHRDLKPSNILLNENCDLKICDFGLARDMGA----------------DAATEAANNLTEYVVTRWYRAPEIMLSSQ 312
BLAST of mRNA_H-elongata_contig114493.1152.1 vs. uniprot
Match: A0A7S2CTE8_9STRA (Mitogen-activated protein kinase (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTE8_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.750e-32 Identity = 60/109 (55.05%), Postives = 73/109 (66.97%), Query Frame = 1
Query: 1 DLHHIIYSGQNLKEAHLQFFLYQILCGLHYMHSARVIHRDLKPANVLVNTTCDLKLCDFGLARSLGKVSSCSPSGSGVAPDVEDSDTGNEVKLTEYVVTRWWRAPEVFL 327
DLH +IYS Q L H+QFFLYQ++CGL Y+HSA V+HRDLKP+N+L+N CDLKLCDFGL+R L +E T LTEYVVTRW+RAPE+ L
Sbjct: 101 DLHRVIYSRQQLTNEHIQFFLYQMMCGLKYIHSAAVLHRDLKPSNILLNANCDLKLCDFGLSRGL----------------LEGEGTSG-ANLTEYVVTRWYRAPEIML 192
BLAST of mRNA_H-elongata_contig114493.1152.1 vs. uniprot
Match: A0A7S3UIQ7_OXYMA (Hypothetical protein (Fragment) n=1 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S3UIQ7_OXYMA) HSP 1 Score: 122 bits (307), Expect = 5.800e-32 Identity = 64/109 (58.72%), Postives = 73/109 (66.97%), Query Frame = 1
Query: 1 DLHHIIYSGQNLKEAHLQFFLYQILCGLHYMHSARVIHRDLKPANVLVNTTCDLKLCDFGLARSLGKVSSCSPSGSGVAPDVEDSDTGNEVKLTEYVVTRWWRAPEVFL 327
DLH +I+S Q L E H Q+FLYQIL GL Y+HSA VIHRDLKPAN+LVN CDL++CDFGLAR GK ED D LT+YVVTRW+RAPEV L
Sbjct: 110 DLHRVIHSKQPLTEEHFQYFLYQILRGLLYLHSANVIHRDLKPANLLVNKNCDLQICDFGLARGFGK-------------HEEDQD------LTDYVVTRWYRAPEVIL 199
BLAST of mRNA_H-elongata_contig114493.1152.1 vs. uniprot
Match: A0A7S0BYM0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BYM0_9STRA) HSP 1 Score: 123 bits (308), Expect = 7.840e-32 Identity = 62/111 (55.86%), Postives = 75/111 (67.57%), Query Frame = 1
Query: 1 DLHHIIYSGQNLKEAHLQFFLYQILCGLHYMHSARVIHRDLKPANVLVNTTCDLKLCDFGLARSLGKVSSCSPSGSGVAP--DVEDSDTGNEVKLTEYVVTRWWRAPEVFL 327
DLH IIYS Q+L H+Q+F+YQIL L YMHSA V+HRDLKP+N+LVN+ CDLK+CD GLAR GV P D + G + LTEYVVTRW+RAPE+ L
Sbjct: 16 DLHRIIYSKQSLSIDHVQYFVYQILRALKYMHSANVLHRDLKPSNLLVNSNCDLKICDLGLAR-------------GVLPEDDAQGKKHGGSIMLTEYVVTRWYRAPEIML 113 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig114493.1152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig114493.1152.1 >prot_H-elongata_contig114493.1152.1 ID=prot_H-elongata_contig114493.1152.1|Name=mRNA_H-elongata_contig114493.1152.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp DLHHIIYSGQNLKEAHLQFFLYQILCGLHYMHSARVIHRDLKPANVLVNTback to top mRNA from alignment at H-elongata_contig114493:91..1578+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig114493.1152.1 ID=mRNA_H-elongata_contig114493.1152.1|Name=mRNA_H-elongata_contig114493.1152.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1488bp|location=Sequence derived from alignment at H-elongata_contig114493:91..1578+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig114493:91..1578+ >mRNA_H-elongata_contig114493.1152.1 ID=mRNA_H-elongata_contig114493.1152.1|Name=mRNA_H-elongata_contig114493.1152.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1020bp|location=Sequence derived from alignment at H-elongata_contig114493:91..1578+ (Himanthalia elongata Himel1 dioecious)back to top |