prot_H-elongata_contig11350.1084.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11350.1084.1
Unique Nameprot_H-elongata_contig11350.1084.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length465
Homology
[Close]
BLAST of mRNA_H-elongata_contig11350.1084.1 vs. uniprot
Match: D7FM50_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM50_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 5.610e-39
Identity = 212/448 (47.32%), Postives = 259/448 (57.81%), Query Frame = 0 
Query:    1 MATPTFSVGVDADPMLVEQTIGKTLDQIIKER-KEKQGVGASRGKKAAAAGGRKDPAKKKAEQVAKSVGTSKAKREAALAKKRGILESSKPLPAQIDAQVQRTKGKQAKKKALKDVEALVAGSKGASKAKARKKRDITAKTAAAAGGVKKEKGSKTAAQDMRGGPRPGGKKQGAGPGGPGKQAALNAGGKGFNVGVKG--EKRSQQLLQQAPTGRRTRRXXXXXXXXXXXXGGVEDTRTMIAAQPSNAKXXXXXXXXXXXXXXXXXXXXSSTTFTFTPDRNLKISFLSDSGRSGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALGAISSASAFASSPPLFDNGLHNGGGXXXKGKVRYTPHP---RMVSGGGS--RRAGLKDIRRPQTHPMDRVVSTARNSRASTIDTRRRNRQGGSFNGGS 440
            M+ P FSVGVDADPM+VEQTI KTL++II ER KE +    ++ KKAAAA           ++VAKSVGTSKAKR+AAL+KKRGI  S+KP PA+I+A+VQRTK +Q+KKKA ++ + LVA ++G SKAKA+K          A+    K+  +  +A+  RGG RPGGKKQ         QAA N   KGFN+GVKG  +K                 XXXXXXXXXXXX    D + ++A + +             XXXXXXXXXX      F PD N++ISF      SGG XXXXXX             XXXXXXXXXXXXXXXXXXXXXXXXXX              +  F  +P   +NGL   GG     K  YTP     R+ SGG    RRAG KD+RR Q +P+DRVV   R +RA T+D RR  RQ    NGG+
Sbjct:    1 MSAPKFSVGVDADPMMVEQTIDKTLEEIINERRKEVKATPTTKSKKAAAA----------KQKVAKSVGTSKAKRDAALSKKRGISASAKPSPAKIEAEVQRTKTQQSKKKARQNADVLVASTRGVSKAKAKKAXXXXXXXXXAS----KKSTAAGSARSKRGGARPGGKKQXXXXXXX-XQAAQNIKSKGFNIGVKGTSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAQAVVAPKAN-----------MRXXXXXXXXXXXXANAPFKPDHNMQISF-----HSGGSXXXXXXVTQGAFVFGSPNGXXXXXXXXXXXXXXXXXXXXXXXXXXPTSFL---------SPTFNPAPQPINNGLRGSGGVK---KATYTPPAPTRRIFSGGVGDVRRAGPKDVRRSQGNPVDRVVRATRKARAGTLDARRNGRQA---NGGN 402
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11350.1084.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM50_ECTSI5.610e-3947.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11350contigH-elongata_contig11350:2575..8738 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11350.1084.1mRNA_H-elongata_contig11350.1084.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11350 1763..8824 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11350.1084.1 ID=prot_H-elongata_contig11350.1084.1|Name=mRNA_H-elongata_contig11350.1084.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=465bp
MATPTFSVGVDADPMLVEQTIGKTLDQIIKERKEKQGVGASRGKKAAAAG
GRKDPAKKKAEQVAKSVGTSKAKREAALAKKRGILESSKPLPAQIDAQVQ
RTKGKQAKKKALKDVEALVAGSKGASKAKARKKRDITAKTAAAAGGVKKE
KGSKTAAQDMRGGPRPGGKKQGAGPGGPGKQAALNAGGKGFNVGVKGEKR
SQQLLQQAPTGRRTRRRRGDGSGSGGGAGGVEDTRTMIAAQPSNAKNAKK
SKRKNRAADAGGADGASSTTFTFTPDRNLKISFLSDSGRSGGKGRSGGGG
SGGRGGSSGGNYPGSYAYSSPNGVGSRSSYASRSSRPQAQTQPRSALGAI
SSASAFASSPPLFDNGLHNGGGGGGKGKVRYTPHPRMVSGGGSRRAGLKD
IRRPQTHPMDRVVSTARNSRASTIDTRRRNRQGGSFNGGSGSGSGGRGRN
DGAPRRVIIVGNGY*
back to top