prot_H-elongata_contig112724.1041.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig112724.1041.1
Unique Nameprot_H-elongata_contig112724.1041.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length243
Homology
BLAST of mRNA_H-elongata_contig112724.1041.1 vs. uniprot
Match: D8LB75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB75_ECTSI)

HSP 1 Score: 293 bits (751), Expect = 1.110e-87
Identity = 167/244 (68.44%), Postives = 192/244 (78.69%), Query Frame = 0
Query:    1 QDVVFASLKLTTSSSSESARKRAVTIAEQVVGKLLEAPASDATVDRIYVGSYHQSKLVVEVDFHLASFYSLVMSLISSKPSADGIEEKDESGFGASLAMVPLGAMGGVAWGLLSTVGVGLANASPTFVFDEIDREHYYGSTVQAVQFLVMSFVKQGVNQAYKVVGHMDILGDPLSLGGNISSGVFGFVKKTGSGRIGEGSKDLLQGVVGGTASSASKVTHALDRVVRSAGGLRS-ASETMESAK 243
            QDVVFASL  T SS +E AR RA+   + VVG LL+APA+DATVDRIY+G Y Q ++ V VDFHL +    V +L+SSKP ADG EEKDE GFGASLAM+PLGA+GGV WGLLS+ G G+ANASPTF FD  + EHYYGS  QAV  +VMSFVKQGV QAYKV+GH+DILGDPLSLG NISSGV GFV KTG+G IGEGSKDL++GVVGGTASSASK+T ALD  VR AG + + A   MES K
Sbjct: 2515 QDVVFASLNWTNSSPAE-ARARAIADTQGVVGNLLQAPAADATVDRIYIGEYFQEEIEVAVDFHLGT---KVAALLSSKPPADGDEEKDEGGFGASLAMMPLGAVGGVVWGLLSSFGAGIANASPTFNFDAYELEHYYGSKTQAVTLVVMSFVKQGVVQAYKVLGHIDILGDPLSLGMNISSGVIGFVTKTGAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVREAGCMDAEAPSGMESTK 2754          
BLAST of mRNA_H-elongata_contig112724.1041.1 vs. uniprot
Match: A0A6H5KB17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB17_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 3.700e-87
Identity = 162/229 (70.74%), Postives = 185/229 (80.79%), Query Frame = 0
Query:    2 DVVFASLKLTTSSSSESARKRAVTIAEQVVGKLLEAPASDATVDRIYVGSYHQSKLVVEVDFHLASFYSLVMSLISSKPSADGIEEKDESGFGASLAMVPLGAMGGVAWGLLSTVGVGLANASPTFVFDEIDREHYYGSTVQAVQFLVMSFVKQGVNQAYKVVGHMDILGDPLSLGGNISSGVFGFVKKTGSGRIGEGSKDLLQGVVGGTASSASKVTHALDRVVRSAG 230
            DVVFASL  T SS +E AR RA+   + VVG LL+APA+DATVDRIY+G Y Q ++ V VDFHL +    V +L+SSKPSADG EEKDE GFGASLAM+PLGA+GGV WGLLS+ G G+ANASPTF FD  + EHYYGS  QAV  +VMSFVKQGV QAYKV+GH+DILGDPLSLG NISSGV GFV KTG+G IGEGSKDL++GVVGGTASSASK+T ALD  VR AG
Sbjct: 1420 DVVFASLNWTNSSPAE-ARARAIADTQGVVGNLLQAPAADATVDRIYIGEYFQEEIEVAVDFHLGT---KVAALLSSKPSADGDEEKDEGGFGASLAMMPLGAVGGVVWGLLSSFGAGIANASPTFNFDAYELEHYYGSKTQAVTQVVMSFVKQGVVQAYKVLGHIDILGDPLSLGMNISSGVIGFVTKTGAGHIGEGSKDLVKGVVGGTASSASKMTDALDNFVREAG 1644          
BLAST of mRNA_H-elongata_contig112724.1041.1 vs. uniprot
Match: A0A7S2GN42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN42_9STRA)

HSP 1 Score: 104 bits (259), Expect = 4.900e-22
Identity = 71/200 (35.50%), Postives = 104/200 (52.00%), Query Frame = 0
Query:   39 ASDATVDRIYVGSYHQSKLV-VEVDFHLASFYSLVMSLISSKPSADGIEEKDESGFGASLAMVPLGAMGGVAWGLLSTVGVGLANASPTFVFDEIDREHYYGSTVQAVQFLVMSFVKQGVNQAYKVVGHMDILGDPLSLGGNISSGVFGFVKKTGSGRIGE------GSKDLLQGVVGGTASSASKVTHALDRVVRSAGG 231
            A  A   RI    Y  S L+ +E  +H +    L + + S   + D + + ++ G         +  MG   W +L  +G  LA+ +PTF F+E+     +G        + MS VKQGV Q YKVVG M++LGDP+SL  N+  GV+ F +KTG+  +GE      G K L QGVVGGT  S +K+T A D ++ +  G
Sbjct:  197 ARHAIQHRIKAPHYTNSGLIYIETLYHSSIVVQLEVMVGSRNLNTDDLADDEQRG---------VWLMGSSLWSMLVVLGSSLAHINPTFQFNELKLADSFGQRWDLASSIFMSLVKQGVAQGYKVVGSMELLGDPVSLVSNMGVGVYQFFRKTGADMLGESETRGEGVKHLFQGVVGGTFGSVAKITGAADTLLSAVTG 387          
BLAST of mRNA_H-elongata_contig112724.1041.1 vs. uniprot
Match: D7G2C7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C7_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 5.880e-20
Identity = 66/191 (34.55%), Postives = 104/191 (54.45%), Query Frame = 0
Query:   47 IYVGSYHQSKLVVEVDFHLASFYSLVMSLISSKPSADGIEEKDESGFGASLAMVPLGAMGGVAWGLLSTVGVGLANASPTFVFDEIDREHYYGSTVQAVQFLVMSFVKQGVNQAYKVVGHMDILGDPLSLGGNISSGVFGFVKKT------GSGRIGEGSKDLLQGVVGGTASSASKVTHALDRVVRSAGG 231
            +YV ++  S +VV V+        L +   +  P A  +E+ + +  G ++       +GG    +LS +G  +A+ +PTFVFDE+   HY GS       +V +  +Q V Q YKVVG M++LGDPLSL G +   V  F  KT       +  +G G+K L++G+VGGT  SA+K+T +L+ ++R   G
Sbjct: 1060 VYVEAFRHSTIVVRVE--------LWVGQAALSPDAAALEDPETTTGGLTV-------LGGGFLTVLSVLGSSIAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYKVVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKVLVKGLVGGTFGSAAKITGSLEGMIRGLSG 1235          
BLAST of mRNA_H-elongata_contig112724.1041.1 vs. uniprot
Match: A0A7R9UEM8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEM8_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 6.820e-17
Identity = 66/199 (33.17%), Postives = 103/199 (51.76%), Query Frame = 0
Query:   38 PASDATVDRIYVGSYHQSKLVVEVDFHLASFYSLVMSLISSKPSADGIEEKDESGFGASLAMVPLGAMGGVAWGLLSTVGVGLANASPTFVFDEIDREHYYGSTVQAVQFLVMSFVKQGVNQAYKVVGHMDILGDPLSLGGNISSGVFGFVKKTG------SGRIGEGSKDLLQGVVGGTASSASKVTHALDRVVRSAG 230
            P    +   IYV   H   +V++++  LA+         S  P+A+ +    +S F +S     L  +G    G L+ +    A+ASP FVF E + ++++G     V+ L +  V QGV Q+YK+ G M++LGDPL+L   +  G+  F + TG      S   GEG + L QGVVGG A SASK++  L+ ++   G
Sbjct: 2016 PLGHVSSGLIYVEHLHHGPIVLQLEI-LANIGDQNAIATSLDPAANPLSL--DSPF-SSEDETALALLGNQVLGALTALVSTFAHASPIFVFGECEVDNFFGQRKDLVRTLTLGLVHQGVAQSYKLFGSMEVLGDPLALANKVGEGMVQFFRATGAELRGESDFKGEGLRRLAQGVVGGAAQSASKISGTLEEMISGLG 2210          
BLAST of mRNA_H-elongata_contig112724.1041.1 vs. uniprot
Match: A0A6H5KWU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU7_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 5.820e-16
Identity = 50/118 (42.37%), Postives = 72/118 (61.02%), Query Frame = 0
Query:  120 LANASPTFVFDEIDREHYYGSTVQAVQFLVMSFVKQGVNQAYKVVGHMDILGDPLSLGGNISSGVFGFVKKT------GSGRIGEGSKDLLQGVVGGTASSASKVTHALDRVVRSAGG 231
            +A+ +PTFVFDE+   HY GS       +V +  +Q V Q YKVVG M++LGDPLSL G +   V  F  KT       +  +G G+K L++G+VGGT  SA+K+T +L+ ++R   G
Sbjct: 2779 IAHVNPTFVFDELVVTHYCGSAGGLTGLVVTALTQQAVAQGYKVVGSMELLGDPLSLVGKLGDSVVQFFTKTKAEMTGDADTVGAGAKLLVKGLVGGTFGSAAKITGSLEGMIRGLSG 2896          
BLAST of mRNA_H-elongata_contig112724.1041.1 vs. uniprot
Match: A0A835YJU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU6_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.220e-12
Identity = 66/201 (32.84%), Postives = 94/201 (46.77%), Query Frame = 0
Query:   64 HLASFYSLVMSLISSKPSADGIEEKDESGFGASLAMVPLGAMGGVAWGLLSTVGVGLANASPTFVFDEIDREHYYGSTVQAVQFLVMSFVKQGVNQ---------------------------AYKVVGHMDILGDPLSLGGNISSGVFGFVKKTGSGRIGE------GSKDLLQGVVGGTASSASKVTHALDRVVRSAGG 231
            H   FY  + SL  +K  A+  E+ D +G         L  +GG     +  +G  LA  SPTFVFDE+   HY+GS  +    L    V+QGV Q                           +YKVVG M++LGDPL+L   +S  V  F++ T +   GE      G++ L+ GVVGG   SA+K+  +L+ V+R   G
Sbjct:  271 HALPFYRKI-SLTFNKTLAN--EDPDAAG--------GLAVLGGSFLSAVGVLGGTLARISPTFVFDELLVTHYFGSARELAAALARGLVQQGVAQGYKXXXXXXXXXXXXXXXXXXXPGSERSYKVVGSMELLGDPLALVNKLSDSVLQFLRTTQAEFRGEEPTFGAGARMLVSGVVGGAFGSAAKIAGSLEDVIRGLSG 460          
BLAST of mRNA_H-elongata_contig112724.1041.1 vs. uniprot
Match: W7U3K2_9STRA (Ph domain containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3K2_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 4.690e-10
Identity = 60/214 (28.04%), Postives = 107/214 (50.00%), Query Frame = 0
Query:   36 EAPASDATVDR-IYVGSYHQSKLVVEVD-------FHLASFYSLVMSLISSKPSAD-GIEEKDESGFGASLAMVPLGAMGGVAWGLLSTVGVGLANASP-TFVFDEIDREHYYGSTVQAVQFLVMSFVKQGVNQAYKVVGHMDILGDPLSLGGNISSGVFGFVKKTGSGRIG------EGSKDLLQGVVGGTASSASKVTHALDRVVRSAGGLR 233
            +A  S+A   R +Y+  +H S L+V ++       F      +    L  ++     G++++ +    + L ++  G +      LL+ +   LA  S  T VF+E+   HY+GS       +V+S  +Q + Q+YK++G MD+LG+PL+L     SGV  F ++T +  +G      EG + L + V+GG  SS SK+T  +  ++    G+R
Sbjct: 3893 DAALSEAVGQRLVYIELFHHSSLIVGMELVPGGGNFPSRKERAKQTGLPGNRMDGSLGLDQELDEALVSGLELIGTGVVQ-----LLADMARSLAQLSGLTLVFNELLFTHYFGSHYDLGHIVVLSLRQQAITQSYKLLGAMDLLGNPLNLFLGFGSGVVEFFRRTQAELVGDADSKGEGLRRLAKAVIGGPFSSVSKITGTVASLLEEVVGVR 4101          
BLAST of mRNA_H-elongata_contig112724.1041.1 vs. uniprot
Match: A0A024TVM9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TVM9_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 9.130e-9
Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = 0
Query:  122 NASPTFVFDEIDREHYYGSTVQAVQFLVMSFVKQGVNQAYKVVGHMDILGDPLSLGGNISSGVFGFVKKTG------SGRIGEGSKDLLQGVVGGTASSASKVTHALDR 224
            + SPTF F  I + H + +  +    LV ++ ++ V QAYK+VG MD+LG+P+ + G+I SG+  F+K TG      S   GEG K L + V        SKVT +LD+
Sbjct: 2069 SGSPTFRFAPITKRHCFTTQSRLQSQLVQNYTREVVVQAYKLVGSMDLLGNPVGVVGDIGSGIISFLKVTGDELTGDSKTRGEGVKILGKTVATSATGFVSKVTGSLDK 2177          
BLAST of mRNA_H-elongata_contig112724.1041.1 vs. uniprot
Match: A0A3L6VIP2_9STRA (WW domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VIP2_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.510e-8
Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = 0
Query:  122 NASPTFVFDEIDREHYYGSTVQAVQFLVMSFVKQGVNQAYKVVGHMDILGDPLSLGGNISSGVFGFVKKTG------SGRIGEGSKDLLQGVVGGTASSASKVTHALDR 224
            + SPTF F  I + H + +  +    L+ ++ ++ V QAYK+VG MD+LG+P+ L G++ SG+  F K TG      S   GEG K L + V        SKVT +LD+
Sbjct:  799 SGSPTFRFAPITKRHCFTTQSRLQSQLIQNYTREVVVQAYKLVGSMDLLGNPVGLVGDLGSGIISFFKVTGDELTGDSKTRGEGVKILGKTVATSATGFVSKVTGSLDK 907          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112724.1041.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LB75_ECTSI1.110e-8768.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB17_9PHAE3.700e-8770.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2GN42_9STRA4.900e-2235.50Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
D7G2C7_ECTSI5.880e-2034.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9UEM8_9STRA6.820e-1733.17Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A6H5KWU7_9PHAE5.820e-1642.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YJU6_9STRA1.220e-1232.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U3K2_9STRA4.690e-1028.04Ph domain containing protein n=4 Tax=Monodopsidace... [more]
A0A024TVM9_9STRA9.130e-938.53Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A3L6VIP2_9STRA1.510e-837.61WW domain-containing protein (Fragment) n=1 Tax=Ap... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031645Vacuolar protein sorting-associated protein 13, C-terminalPFAMPF16909VPS13_Ccoord: 114..222
e-value: 9.8E-12
score: 45.0
NoneNo IPR availablePANTHERPTHR16166:SF93VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13Dcoord: 126..223
IPR026847Vacuolar protein sorting-associated protein 13PANTHERPTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13coord: 126..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig112724contigH-elongata_contig112724:285..2072 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig112724.1041.1mRNA_H-elongata_contig112724.1041.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig112724 285..2072 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig112724.1041.1 ID=prot_H-elongata_contig112724.1041.1|Name=mRNA_H-elongata_contig112724.1041.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=243bp
QDVVFASLKLTTSSSSESARKRAVTIAEQVVGKLLEAPASDATVDRIYVG
SYHQSKLVVEVDFHLASFYSLVMSLISSKPSADGIEEKDESGFGASLAMV
PLGAMGGVAWGLLSTVGVGLANASPTFVFDEIDREHYYGSTVQAVQFLVM
SFVKQGVNQAYKVVGHMDILGDPLSLGGNISSGVFGFVKKTGSGRIGEGS
KDLLQGVVGGTASSASKVTHALDRVVRSAGGLRSASETMESAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031645VPS13_C
IPR026847VPS13