prot_H-elongata_contig11267.1035.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11267.1035.1
Unique Nameprot_H-elongata_contig11267.1035.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length484
Homology
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BLAST of mRNA_H-elongata_contig11267.1035.1 vs. uniprot
Match: D8LBB8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBB8_ECTSI)

HSP 1 Score: 681 bits (1757), Expect = 4.460e-242
Identity = 327/519 (63.01%), Postives = 376/519 (72.45%), Query Frame = 0 
Query:    6 TMEGDMRRSRERCPACARLQLEIETGQFVPGGRGDDKLYDA--------------------------FRSGGMRTRTDQDSAQHAWRPEEVICNHCLCSHESHEDTGPNGQRCCGLRREGPWDKVCEWCRSKKGCRAWARARPCPAQGT---------------EHACEMGAKGSYCTHCRCSCATHNPHRFDHRSNWVSRNLDTQRACGVCLACWSGWCVPKSGAKRKLLGATGEPEEPFARQWRPGRDGDVYVLTGLFDKLTGKLPEGSFAHAVFGSSLRYFRSFVSPLETLQVFHEAGVTSGERSASIGEAWSGGGSQYPPEKPAGSRKVVAAPIRQGAGAERHFSRRHGRRDHKWQWDMSRSPWSLMLLQKGRHALGVPREEAEEFEEAGIIAFPGHVVKHKDTVKNGGYGKTIGTLVLRSPEAAFVCLQVQRGLLEKAVRAAFDLGVELPPRFEQKGRFKFAIYEGDAWAMVGGTARNDAEHAVVCGRSAIPDGEPGEGFVRVAFNMRWGWQDD 483
            +++ DMRR+++RCPACAR QL IE GQ+VPG     +LY                                   +      AQH  RPEE++C HCLCS+E+HEDTGPNGQRCCG  REG WD+VCE C++ + CRAWARAR CPA+                 E  C+   + ++C HC C CA  +PH F+ +SNW+S N + QRAC +CL CW+GWC+P SG KRKL+GAT EPEEPFARQWRPGRD DV+VLTGLFD+LTG LPE  F +AVFGSSLRYF+  +   E      EAGVT G+RS +IGEAWSGGGS YPPE+PAG+RKVVAAP+RQG GA RHFSR HGRRDH WQWDM +SPWSL L+ KGR ALGV  EEA EFEEAGIIAFPGHVVKHKD+VKNGGYGKTIGTLVLRSPE+AFVC+Q Q   L +AV  A +LGVELPPR  +KGRFKFAI E DAWAMVGGTARNDAEHAVVCGR  IP GEPGEGFVRVAFNMRWGWQDD
Sbjct:    5 SLQADMRRAKDRCPACARQQLHIENGQYVPGDEVKGQLYTTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSNAYNALAQHEIRPEEIVCTHCLCSNENHEDTGPNGQRCCGGLREGLWDRVCELCKASESCRAWARARACPAEEAGRAPGEPNHAGNSTGEKPCKTEGRANFCMHCTCPCAQVHPHTFEDKSNWMSTNPEVQRACRICLPCWAGWCIPLSGTKRKLVGATMEPEEPFARQWRPGRDADVFVLTGLFDELTGLLPENGFPYAVFGSSLRYFKGLIGSAEAKHALKEAGVTPGDRSGAIGEAWSGGGSMYPPERPAGARKVVAAPLRQGEGANRHFSRVHGRRDHNWQWDMLKSPWSLGLMAKGRLALGVSEEEANEFEEAGIIAFPGHVVKHKDSVKNGGYGKTIGTLVLRSPESAFVCVQGQGERLGRAVELAEELGVELPPRVAEKGRFKFAINELDAWAMVGGTARNDAEHAVVCGRKVIPAGEPGEGFVRVAFNMRWGWQDD 523
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11267.1035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBB8_ECTSI4.460e-24263.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11267contigH-elongata_contig11267:5032..6830 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11267.1035.1mRNA_H-elongata_contig11267.1035.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11267 4217..6904 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11267.1035.1 ID=prot_H-elongata_contig11267.1035.1|Name=mRNA_H-elongata_contig11267.1035.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=484bp
MTSLTTMEGDMRRSRERCPACARLQLEIETGQFVPGGRGDDKLYDAFRSG
GMRTRTDQDSAQHAWRPEEVICNHCLCSHESHEDTGPNGQRCCGLRREGP
WDKVCEWCRSKKGCRAWARARPCPAQGTEHACEMGAKGSYCTHCRCSCAT
HNPHRFDHRSNWVSRNLDTQRACGVCLACWSGWCVPKSGAKRKLLGATGE
PEEPFARQWRPGRDGDVYVLTGLFDKLTGKLPEGSFAHAVFGSSLRYFRS
FVSPLETLQVFHEAGVTSGERSASIGEAWSGGGSQYPPEKPAGSRKVVAA
PIRQGAGAERHFSRRHGRRDHKWQWDMSRSPWSLMLLQKGRHALGVPREE
AEEFEEAGIIAFPGHVVKHKDTVKNGGYGKTIGTLVLRSPEAAFVCLQVQ
RGLLEKAVRAAFDLGVELPPRFEQKGRFKFAIYEGDAWAMVGGTARNDAE
HAVVCGRSAIPDGEPGEGFVRVAFNMRWGWQDD*
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