mRNA_H-elongata_contig112635.1031.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig112635.1031.1
Unique NamemRNA_H-elongata_contig112635.1031.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig112635.1031.1 vs. uniprot
Match: A0A6H5K6C5_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6C5_9PHAE)

HSP 1 Score: 297 bits (760), Expect = 6.920e-95
Identity = 175/304 (57.57%), Postives = 207/304 (68.09%), Query Frame = 1
Query:    1 SVVFDGQDLKEVSEDAPYARHFIGPVTAAAADAERAVLGANSTTRSRGDESAEPGAGGIVPCMSTCSIRAAPMYGPGES-------EYVLPGLAGRANAGTRPVGDGRNVVDFVFAGNVAHAMLLAAQELLAPIGGDSDSAQPTHSAAAARTVAVAGRAFFVTDEEPVPFSDFAGRALSRLGYPGPDDAGGAAGIPVALAVVLASLLQFVALLMSPLFEFRPTLTARRVAEESRAWRFDVSRAKRELGYKPLWTQEEGLEMSLCSAECLRNPRAKLKHIGPFTAEEVARHSTEDDAWIIVDDKV 891
            SV+F GQDLK++SEDAPY   F  P  A  A+AE+AVL AN+ + SR               M TCS+RAAP YG  +        + ++PGLA RA AG RPVGDG N VDFV+AGNVAHA+LLAAQ +L        ++  T         AVAGRAF VTD EPVP+ +FA RALSRLGYP   D  G+ G+ V LA  LA LL+ +AL++SP+FEFRP LTA RVAEES   R D SRA+  LGY PLW+QEEGL+++L  A  LRNPRAKLKHIGPFTAEEVARHS+EDDAWIIVD KV
Sbjct:  139 SVLFGGQDLKQISEDAPYPSRFADPSAAYIAEAEKAVLEANADS-SRSST------------MLTCSVRAAPSYGAADEGEEASSEDRLIPGLAFRARAGVRPVGDGNNAVDFVYAGNVAHALLLAAQSML-------QASLATAXXXXXXXXAVAGRAFHVTDMEPVPYGEFAARALSRLGYP---DGAGSGGMSVLLATALALLLRVLALVVSPVFEFRPALTALRVAEESAVRRLDTSRAREGLGYTPLWSQEEGLDITLHGATALRNPRAKLKHIGPFTAEEVARHSSEDDAWIIVDGKV 419          
BLAST of mRNA_H-elongata_contig112635.1031.1 vs. uniprot
Match: D8LGB0_ECTSI (NAD dependent epimerase/dehydratase, putative (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB0_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 6.180e-94
Identity = 173/303 (57.10%), Postives = 202/303 (66.67%), Query Frame = 1
Query:    1 SVVFDGQDLKEVSEDAPYARHFIGPVTAAAADAERAVLGANSTTRSRGDESAEPGAGGIVPCMSTCSIRAAPMYGPGESE-------YVLPGLAGRANAGTRPVGDGRNVVDFVFAGNVAHAMLLAAQELLAPIGGDSDSAQPTHSAAAARTVAVAGRAFFVTDEEPVPFSDFAGRALSRLGYPGPDDAGGAAGIPVALAVVLASLLQFVALLMSPLFEFRPTLTARRVAEESRAWRFDVSRAKRELGYKPLWTQEEGLEMSLCSAECLRNPRAKLKHIGPFTAEEVARHSTEDDAWIIVDDK 888
            SV+F GQDLK +SEDAPY   F  P  A  A+AE+AVL AN  + S                M TCS+RAAP YG  + E        ++PGLA RA AG RPVGDG N VDFV+AGNVAHA+LLAAQ +L                      AVAGRAF VTD EP+P+ +FA RALSRLGYP  D AGG+ G+ V LA  LA LL+ +AL++SP+FEFRP LTA RVAEES   R D SRA+  LGY PLW+QEEGL+++L  A  LRNPRAKLKHIGPFTAEEVARHS+E+DAWIIVD K
Sbjct:  141 SVLFGGQDLKLISEDAPYPSRFADPPAAYIAEAEKAVLEANVDSSSGSST------------MLTCSVRAAPSYGAADEEGEASSEDRLIPGLAFRARAGVRPVGDGNNAVDFVYAGNVAHALLLAAQSMLQASXXXXXXXXXX---------AVAGRAFHVTDMEPIPYGEFAARALSRLGYP--DGAGGSGGMSVLLATALALLLRVLALVVSPVFEFRPALTALRVAEESAVRRLDTSRAREGLGYTPLWSQEEGLDITLHRATALRNPRAKLKHIGPFTAEEVARHSSEEDAWIIVDGK 420          
BLAST of mRNA_H-elongata_contig112635.1031.1 vs. uniprot
Match: A0A836CIL1_9STRA (3-beta hydroxysteroid dehydrogenase/isomerase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIL1_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.330e-42
Identity = 123/300 (41.00%), Postives = 160/300 (53.33%), Query Frame = 1
Query:    1 SVVFDGQDLKEVSEDAPYARHFIGPVTAAAADAERAVLGANSTTRSRGDESAEPGAGGIVPCMSTCSIRAAPMYGPGESEYVLPGLAGRAN-AGTRPVGDGRNVVDFVFAGNVAHAMLLAAQELLAPIGGDSDSAQPTHSAAAARTVAVAGRAFFVTDEEPVPFSDFAGRALSRLGYPGPDDAGGAAGIPVALAVVLASLLQFVALLMSPLFEFRPTLTARRVAEESRAWRFDVSRAKRELGYKPLWTQEEGLEMSLCSAEC--LRNPRAKLKHIGPFTAEEVARHSTEDDAWIIVDDKV 891
            SVVF G DL+    D P A   I   TAA + AE+ V   N             G GG    ++T  +R   +YG G+++ +LP LA  A  A  + VG G NVVDF +AGNVAHA LLAA+ L A   G SD+A            A+AG A   TD EPVP+  F G  L  LGY     +  A  +P A+A  LA     VA +   +   RP LT  R+   +R   +  + A   LGY P W++ E L+++L SA+   LRNP A+++ +GPF+A EVARH T DDAWIIVD KV
Sbjct:  122 SVVFTGSDLRAAGADLPPASPCIDAHTAALSAAEQRVAAFN-------------GRGGA---LATAVVRHHNLYGAGDAD-LLPALAQHAREARMQVVGGGDNVVDFSYAGNVAHAHLLAARALAA---GGSDAA------------ALAGCAVVATDAEPVPYRQFVGGVLEGLGY----GSKAATSVPYAVAFSLALFFHAVAFMFGSVVALRPRLTLGRLKSLTRFQYYSGAAAHELLGYHPPWSRAEALQITLQSADARALRNPAARVRPVGPFSAAEVARHRTADDAWIIVDGKV 385          
BLAST of mRNA_H-elongata_contig112635.1031.1 vs. uniprot
Match: A0A4D9CSF7_9STRA (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSF7_9STRA)

HSP 1 Score: 144 bits (364), Expect = 4.330e-36
Identity = 108/310 (34.84%), Postives = 149/310 (48.06%), Query Frame = 1
Query:    1 SVVFDGQDLKEVSEDAPYARHFIGPVTAAAADAERAVLGANSTTRSRGDESAEPGAGGIVPCMSTCSIRAAPMYGPGESEYVLPGLAGRANAGTRP--VGDGRNVVDFVFAGNVAHAMLLAAQELLAPIGGDSDSAQPTHSAAAARTVAVAGRAFFVTDEEPVPFSDFAGRALSRLGYPGPDDAGGAAGIPVALAVVLASLLQFVALLMSPL-FEFRPTLTARRVAEESRAWRFDVSRAKRELGYKPLWTQEEGLEMSL-CSAECLRNPRA---------KLKHIGPFTAEEVARHSTEDDAWIIVDDKV 891
            SVV++G++   V E  P     +   T   ADAE  VL AN                     M T +IR   ++GPG+ ++  P L   A  G     +G+GRNV DF F GNVAHA LLAA++L                    R   V G+AFFVT++ PVPF DF  + L+  GYP P        +P  L  V+   +  +A L+  +   F+PT T  RV   +    + + +AKR LGY P W+QEE L +   C    L NPRA         K + +  +T ++V+RH+T  DAWI+VD KV
Sbjct:  180 SVVYEGENQAGVDESTPIPTASLDSYTKTKADAEALVLAANGQHG-----------------MHTAAIRPHGIFGPGDRQF-FPVLVESARKGKTKYALGEGRNVADFTFVGNVAHAHLLAAEKL-------------------GRVPGVDGQAFFVTNDAPVPFWDFLAQVLTGFGYPAPS-----VRLPAGLMTVVGGWMDGMATLLRMVGVRFQPTFTRSRVQYLTTHHYYSIEKAKRLLGYAPAWSQEEALALCFQCMMPALANPRAPKPRRVTVKKGQSVPIYTVQQVSRHNTRGDAWIVVDGKV 447          
BLAST of mRNA_H-elongata_contig112635.1031.1 vs. uniprot
Match: A0A1W0WSJ5_HYPDU (Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0WSJ5_HYPDU)

HSP 1 Score: 127 bits (319), Expect = 1.380e-30
Identity = 99/270 (36.67%), Postives = 136/270 (50.37%), Query Frame = 1
Query:    1 SVVFDGQDLKEVSEDAPYARHFIGPVTAAAADAERAVLGANSTTRSRGDESAEPGAGGIVPCMSTCSIRAAPMYGPGESEYVLPGLAGRANAGTRP--VGDGRNVVDFVFAGNVAHAMLLAAQELLAPIGGDSDSAQPTHSAAAARTVAVAGRAFFVTDEEPVPFSDFAGRALSRLGYPGPDDAGGAAGIPVALAVVLASLLQFVALLMSPLFEFRPTLTARRVAEESRAWRFDVSRAKRELGYKPLWTQEEGLEMSLCSAECLRNPRAK 804
            SVV+DG D+    ED+PYA   I   TA     E+ VL AN     R               + T ++R   ++GP +   V P L   A  G     +GDG NVVDF +  NVAH ++LAA+ L                   AR  AV G+AF +T++EPV F +F  R L+ LGY  P        IP A+   LA LL FV+ L+SPL ++ PT T  RVA  S    +   +AK  LGY+PL+T ++G++++L S   LRN  A+
Sbjct:  129 SVVYDGHDILGDDEDSPYALRPIDAYTATKITQEQMVLRANMLNNGR---------------LLTVAVRPHGIFGPRDPNLV-PVLIDAARRGKMKFIIGDGNNVVDFTYVRNVAHGLILAAECL-------------------ARDTAVGGQAFHITNDEPVLFWEFMARILNGLGYDAPKRC-----IPRAVVYFLALLLAFVSRLISPLVKWEPTFTPMRVALISTHHTYSCEKAKTLLGYQPLFTLDQGIQLTLDSFPELRNEDAE 358          
BLAST of mRNA_H-elongata_contig112635.1031.1 vs. uniprot
Match: S4RZP4_PETMA (NAD(P) dependent steroid dehydrogenase-like n=2 Tax=Petromyzon marinus TaxID=7757 RepID=S4RZP4_PETMA)

HSP 1 Score: 116 bits (290), Expect = 5.070e-27
Identity = 94/265 (35.47%), Postives = 128/265 (48.30%), Query Frame = 1
Query:    1 SVVFDGQDLKEVSEDAPYARHFIGPVTAAAADAERAVLGANSTTRSRGDESAEPGAGGIVPCMSTCSIRAAPMYGPGESEYVLPGLAGRANAGTRP--VGDGRNVVDFVFAGNVAHAMLLAAQELLAPIGGDSDSAQPTHSAAAARTVAVAGRAFFVTDEEPVPFSDFAGRALSRLGYPGPDDAGGAAGIPVALAVVLASLLQFVALLMSPLFEFRPTLTARRVAEESRAWRFDVSRAKRELGYKPLWTQEEGLEMSLCSAECLR 789
            SVVF+G DLK+ +E+ PYAR  I   T      E+AVL AN   R                   T +IR   ++GP + + V P L   A  G     +GDG N+VDF +  NVAH  +LAA+ L        D   P           V G+AF +T++EPVPF  F  R L  LGY  P        +P  L  VLA LLQ ++ L+ P++ F PT +  RVA  +    +  +RAKR LGY+P    ++ +  +L S   LR
Sbjct:   61 SVVFEGVDLKDATEEMPYARRPIDYYTETKILQEKAVLAANCPERG----------------FLTVAIRPHGIFGPRDPQLV-PILVDAARRGKMKFIIGDGSNLVDFTYVENVAHGHILAAEHL--------DPGSP-----------VCGQAFHITNDEPVPFWAFMSRLLEGLGYAAPRHR-----LPYRLVYVLALLLQLLSTLLRPVWAFTPTFSPMRVALAATHHYYSCARAKRLLGYRPPVQLDDAVARTLASYPHLR 284          
BLAST of mRNA_H-elongata_contig112635.1031.1 vs. uniprot
Match: A0A8D0GNC3_SPHPU (NAD(P) dependent steroid dehydrogenase-like n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0GNC3_SPHPU)

HSP 1 Score: 115 bits (289), Expect = 1.380e-26
Identity = 92/260 (35.38%), Postives = 129/260 (49.62%), Query Frame = 1
Query:    1 SVVFDGQDLKEVSEDAPYARHFIGPVTAAAADAERAVLGANSTTRSRGDESAEPGAGGIVPCMSTCSIRAAPMYGPGESEYVLPGLAGRANAGTRP--VGDGRNVVDFVFAGNVAHAMLLAAQELLAPIGGDSDSAQPTHSAAAARTVAVAGRAFFVTDEEPVPFSDFAGRALSRLGYPGPDDAGGAAGIPVALAVVLASLLQFVALLMSPLFEFRPTLTARRVAEESRAWRFDVSRAKRELGYKPLWTQEEGLEMSLCS 774
            SVVF+G+D+K  +ED PYA+  I   T      E+ VL A+   ++                  T +IR   ++GP + + V P L   A +G     +GDG+N+VDF F  NV H  +LAA+ L              H     R   + G+AF +T++EPVPF +F  R L+ L Y  P        IP  LA  LA LL  V LL+SPLF  +PT T  RVA       +   RAKR++ YKPL + +E L+ ++ S
Sbjct:   95 SVVFEGRDIKNGTEDLPYAKKPIDYYTETKILQEKEVLSASDPEKN----------------FFTTAIRPHGIFGPRDPQLV-PILIQAAKSGKMKFMIGDGKNLVDFTFVENVVHGHILAAEHL--------------H-----RDSPLCGKAFHITNDEPVPFWEFMSRILTGLNYDDPKYH-----IPYWLAYYLALLLSLVVLLLSPLFVIKPTFTPMRVALAGTFHYYSCERAKRDMNYKPLVSLDEALQRTVQS 313          
BLAST of mRNA_H-elongata_contig112635.1031.1 vs. uniprot
Match: A0A8D2LGL4_VARKO (NAD(P) dependent steroid dehydrogenase-like n=7 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2LGL4_VARKO)

HSP 1 Score: 115 bits (289), Expect = 4.860e-26
Identity = 93/265 (35.09%), Postives = 127/265 (47.92%), Query Frame = 1
Query:    1 SVVFDGQDLKEVSEDAPYARHFIGPVTAAAADAERAVLGANSTTRSRGDESAEPGAGGIVPCMSTCSIRAAPMYGPGESEYVLPGLAGRANAGTRP--VGDGRNVVDFVFAGNVAHAMLLAAQELLAPIGGDSDSAQPTHSAAAARTVAVAGRAFFVTDEEPVPFSDFAGRALSRLGYPGPDDAGGAAGIPVALAVVLASLLQFVALLMSPLFEFRPTLTARRVAEESRAWRFDVSRAKRELGYKPLWTQEEGLEMSLCSAECLR 789
            SVVF+G D+K+ +ED PYA+  I   T      E+ VL AN   R+                  T +IR   ++GP + + V P L   A +G     +GDG+N+VDF F  NV H  +LAA++L                    R   + G+AF +T++EPVPF +F  R L  LGY  P        IP  LA  LA LL  V +L+ PL    PT T  RVA       +   RAKR++GYKPL   +E +  ++ S   LR
Sbjct:  174 SVVFEGTDIKDGTEDLPYAKKPIDYYTETKILQEKEVLSANDPARN----------------FCTVAIRPHGIFGPRDPQLV-PILVQAARSGKMKFIIGDGKNLVDFTFVENVVHGHILAAEQLR-------------------RDSPLCGKAFHITNDEPVPFWEFLSRILMGLGYEAPKYH-----IPYWLAYCLALLLSLVVMLLRPLVALSPTFTPMRVALAGTFHFYSCERAKRDMGYKPLVGLKEAVAKTVESYPHLR 397          
BLAST of mRNA_H-elongata_contig112635.1031.1 vs. uniprot
Match: L8Y793_TUPCH (Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating n=1 Tax=Tupaia chinensis TaxID=246437 RepID=L8Y793_TUPCH)

HSP 1 Score: 114 bits (285), Expect = 1.020e-25
Identity = 88/265 (33.21%), Postives = 128/265 (48.30%), Query Frame = 1
Query:    1 SVVFDGQDLKEVSEDAPYARHFIGPVTAAAADAERAVLGANSTTRSRGDESAEPGAGGIVPCMSTCSIRAAPMYGPGESEYVLPGLAGRANAGTRP--VGDGRNVVDFVFAGNVAHAMLLAAQELLAPIGGDSDSAQPTHSAAAARTVAVAGRAFFVTDEEPVPFSDFAGRALSRLGYPGPDDAGGAAGIPVALAVVLASLLQFVALLMSPLFEFRPTLTARRVAEESRAWRFDVSRAKRELGYKPLWTQEEGLEMSLCSAECLR 789
            SV+F+G D+K  +ED PYA   I   T      E  VLGAN   ++                  T +IR   ++GP + + V P L   A  G     +G+G+N+VDF F  NV H  +LAA+ L                   +R  A+ G+AF +T++EP+PFS F  R L+ L Y  P        IP  +A  LA LL  + + +SPL + +PT T  RVA       +   RAK+ LGY+PL + E+ ++ ++ S   LR
Sbjct:  135 SVIFEGADIKNGTEDLPYAARPIDYYTETKILQESTVLGANDPEKN----------------FLTTAIRPHGIFGPRDPQLV-PILIEAARTGKMKFMIGNGKNLVDFTFVENVVHGHILAAEHL-------------------SRDPALGGKAFHITNDEPIPFSTFLSRILTGLNYEAPKYR-----IPYWVAYYLALLLSLLVMAISPLIQLQPTFTPMRVALAGTFHYYSCERAKKALGYRPLVSMEDAVQRTVQSFRHLR 358          
BLAST of mRNA_H-elongata_contig112635.1031.1 vs. uniprot
Match: A0A059LN13_9CHLO (3-beta hydroxysteroid dehydrogenase/isomerase n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LN13_9CHLO)

HSP 1 Score: 114 bits (285), Expect = 1.510e-25
Identity = 95/270 (35.19%), Postives = 134/270 (49.63%), Query Frame = 1
Query:    1 SVVFDGQDLKEVSEDAPYARHFIGPVTAAAADAERAVLGANSTTRSRGDESAEP--GAGGIVPCMSTCSIRAAPMYGPGESEYVLPGLAGRANAGTRP--VGDGRNVVDFVFAGNVAHAMLLAAQELLAPIGGDSDSAQPTHSAAAARTVAVAGRAFFVTDEEPVPFSDFAGRALSRLGYPGPDDAGGAAGIPVALAVVLASLLQFVAL-LMSPLFEFRPTLTARRVAEESRAWRFDVSRAKRELGYKPLWTQEEGLEMSLCSAECLRNP 795
            SVVFDG  L+   E APYA   +   TA  ADAER VL +N   R     ++EP   +  +VP ++T ++R + ++G    +  +P +A  A  G     +G G N++D+ +AGNVAHA L AA  LL       D+A             VAGR FFVT+++P PF  F G   + LGYP P        +P  L + LA  +QFV + L+SP    R   T  R+   +    F    A+  L Y+PL   +E L  +L   + LR P
Sbjct:  138 SVVFDGSSLRGADESAPYAAKPLDFYTATKADAERLVLASNEVERGSRGAASEPRQSSPSLVP-LATVALRPSGIFGE-HDQLTVPEIAANAARGKLKYVIGRGDNLMDWTYAGNVAHAHLCAADALL------EDAAH------------VAGRPFFVTNDDPRPFWGFMGDVCAGLGYPRPS-----VRLPRWLVLFLAYFVQFVVVPLLSPFKTVRSDFTPTRIRLATADRAFSCKAAREHLKYRPLVPHDEALRRTLEHFQFLRRP 382          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112635.1031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6C5_9PHAE6.920e-9557.57Cytochrome b5 heme-binding domain-containing prote... [more]
D8LGB0_ECTSI6.180e-9457.10NAD dependent epimerase/dehydratase, putative (Par... [more]
A0A836CIL1_9STRA2.330e-4241.003-beta hydroxysteroid dehydrogenase/isomerase fami... [more]
A0A4D9CSF7_9STRA4.330e-3634.84Cytochrome b5 heme-binding domain-containing prote... [more]
A0A1W0WSJ5_HYPDU1.380e-3036.67Sterol-4-alpha-carboxylate 3-dehydrogenase, decarb... [more]
S4RZP4_PETMA5.070e-2735.47NAD(P) dependent steroid dehydrogenase-like n=2 Ta... [more]
A0A8D0GNC3_SPHPU1.380e-2635.38NAD(P) dependent steroid dehydrogenase-like n=1 Ta... [more]
A0A8D2LGL4_VARKO4.860e-2635.09NAD(P) dependent steroid dehydrogenase-like n=7 Ta... [more]
L8Y793_TUPCH1.020e-2533.21Sterol-4-alpha-carboxylate 3-dehydrogenase, decarb... [more]
A0A059LN13_9CHLO1.510e-2535.193-beta hydroxysteroid dehydrogenase/isomerase n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig112635contigH-elongata_contig112635:749..2104 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score299.7
Seed ortholog evalue1.5e-78
Seed eggNOG ortholog2880.D8LGB0
Preferred nameERG26
KEGG rclassRC01163
KEGG koko:K07748
KEGG ReactionR07494
KEGG Pathwayko00100,ko01100,ko01130,map00100,map01100,map01130
KEGG ModuleM00101
GOsGO:0000252,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006066,GO:0006629,GO:0006694,GO:0006696,GO:0008150,GO:0008152,GO:0008202,GO:0008204,GO:0008610,GO:0009058,GO:0009987,GO:0012505,GO:0016020,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016491,GO:0016614,GO:0016616,GO:0031984,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046165,GO:0055114,GO:0071704,GO:0097384,GO:0098827,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653
EggNOG free text desc.3-beta-hydroxy-delta5-steroid dehydrogenase activity
EggNOG OGsCOG0451@1,KOG1430@2759
EC1.1.1.170
COG Functional cat.GM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons2
Model size891
Cds size891
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929648.053829-CDS-H-elongata_contig112635:748..8921622929648.053829-CDS-H-elongata_contig112635:748..892Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig112635 749..892 -
1691679104.5395725-CDS-H-elongata_contig112635:748..8921691679104.5395725-CDS-H-elongata_contig112635:748..892Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig112635 749..892 -
1622929648.072295-CDS-H-elongata_contig112635:1357..21041622929648.072295-CDS-H-elongata_contig112635:1357..2104Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig112635 1358..2104 -
1691679104.5487607-CDS-H-elongata_contig112635:1357..21041691679104.5487607-CDS-H-elongata_contig112635:1357..2104Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig112635 1358..2104 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig112635.1031.1prot_H-elongata_contig112635.1031.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig112635 749..2104 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig112635.1031.1

>prot_H-elongata_contig112635.1031.1 ID=prot_H-elongata_contig112635.1031.1|Name=mRNA_H-elongata_contig112635.1031.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=297bp
SVVFDGQDLKEVSEDAPYARHFIGPVTAAAADAERAVLGANSTTRSRGDE
SAEPGAGGIVPCMSTCSIRAAPMYGPGESEYVLPGLAGRANAGTRPVGDG
RNVVDFVFAGNVAHAMLLAAQELLAPIGGDSDSAQPTHSAAAARTVAVAG
RAFFVTDEEPVPFSDFAGRALSRLGYPGPDDAGGAAGIPVALAVVLASLL
QFVALLMSPLFEFRPTLTARRVAEESRAWRFDVSRAKRELGYKPLWTQEE
GLEMSLCSAECLRNPRAKLKHIGPFTAEEVARHSTEDDAWIIVDDKV
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mRNA from alignment at H-elongata_contig112635:749..2104-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig112635.1031.1 ID=mRNA_H-elongata_contig112635.1031.1|Name=mRNA_H-elongata_contig112635.1031.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1356bp|location=Sequence derived from alignment at H-elongata_contig112635:749..2104- (Himanthalia elongata Himel1 dioecious)
AGCGTAGTTTTCGACGGCCAAGACTTGAAAGAGGTTTCAGAAGACGCGCC CTACGCAAGACATTTCATCGGCCCTGTTACAGCGGCAGCGGCGGACGCAG AGAGGGCGGTGCTAGGCGCTAACAGCACCACGCGCAGCCGCGGTGATGAG TCGGCGGAACCGGGGGCTGGAGGCATCGTGCCTTGTATGTCAACGTGCAG CATCCGTGCCGCCCCGATGTACGGCCCGGGAGAGTCAGAGTACGTCTTGC CGGGGCTCGCGGGTCGCGCAAACGCGGGAACTCGCCCGGTCGGCGATGGA AGGAACGTGGTAGATTTCGTCTTCGCGGGCAACGTGGCTCACGCCATGTT GCTCGCGGCGCAGGAGCTTCTCGCTCCGATAGGGGGCGATTCCGACTCTG CCCAGCCCACCCACTCGGCGGCTGCGGCGAGGACGGTCGCAGTCGCAGGG CGAGCCTTTTTTGTAACGGATGAGGAACCGGTACCCTTCAGCGACTTCGC GGGTCGCGCTCTATCTCGGCTTGGATACCCCGGGCCCGACGATGCCGGTG GCGCCGCGGGGATTCCGGTGGCGCTTGCGGTGGTGCTTGCCTCTCTGCTT CAATTCGTGGCGCTCTTGATGTCGCCGCTCTTTGAGTTCCGACCAACCCT GACGGCGCGTCGCGTGGCGGAAGAGAGTCGAGCGTGGCGGTTTGACGTAT CTAGGGCGAAGAGAGAGCTCGGGTACAAGCCCTTGTGGACCCAGGAGGTG AGGGTGTGTGAGGGCGGGTCCAGGAGCGTTGTGGCGCCAAGGTTCCAATC GCTCGAAATGCGCACAGGGCGAACCAGCGGTTGCCTCCTCGAAGAAAAGT AGCTGGTGGTCAACCCTCGGCGTACTCACGTGGCGTGTTGAGAATCGAAC GAGGGGATCGAGAGAGCAAAACCCTGTCGTGTGAAAATGTGCAAATTGTT TTCGGATGTCTCCTAGCTACGAATGGTCCTAGTGTGTACTACATGCAGGA CTATATTCGAGAAAGTCCAGCAACGAACCCGATCTTCTCCGCGCAAAGCC ACTGCGATACAACGCGAATGTCTGGTGTTAATCTTCCGGAACTCTTGGGG AGGGGGGTCGGGATACTTTCGTCTTCCCCCCTCCACCCTCCTGAGTTGCA CTAAAAGTAACTAGTAGATACCAGCACTCCATGTTTTCGTGTGCGCTCAC CCGTCGGAGCAGGAGGGCCTGGAGATGTCGCTGTGCTCGGCAGAGTGTCT CCGAAATCCTCGGGCGAAGTTGAAGCACATAGGTCCGTTCACGGCGGAGG AGGTGGCTCGACACTCTACCGAGGACGATGCTTGGATTATCGTCGATGAC AAGGTC
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Coding sequence (CDS) from alignment at H-elongata_contig112635:749..2104-

>mRNA_H-elongata_contig112635.1031.1 ID=mRNA_H-elongata_contig112635.1031.1|Name=mRNA_H-elongata_contig112635.1031.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1782bp|location=Sequence derived from alignment at H-elongata_contig112635:749..2104- (Himanthalia elongata Himel1 dioecious)
AGCGTAGTTTTCGACGGCCAAGACTTGAAAGAGGTTTCAGAAGACGCGCC
CTACGCAAGACATTTCATCGGCCCTGTTACAGCGGCAGCGGCGGACGCAG
AGAGGGCGGTGCTAGGCGCTAACAGCACCACGCGCAGCCGCGGTGATGAG
TCGGCGGAACCGGGGGCTGGAGGCATCGTGCCTTGTATGTCAACGTGCAG
CATCCGTGCCGCCCCGATGTACGGCCCGGGAGAGTCAGAGTACGTCTTGC
CGGGGCTCGCGGGTCGCGCAAACGCGGGAACTCGCCCGGTCGGCGATGGA
AGGAACGTGGTAGATTTCGTCTTCGCGGGCAACGTGGCTCACGCCATGTT
GCTCGCGGCGCAGGAGCTTCTCGCTCCGATAGGGGGCGATTCCGACTCTG
CCCAGCCCACCCACTCGGCGGCTGCGGCGAGGACGGTCGCAGTCGCAGGG
CGAGCCTTTTTTGTAACGGATGAGGAACCGGTACCCTTCAGCGACTTCGC
GGGTCGCGCTCTATCTCGGCTTGGATACCCCGGGCCCGACGATGCCGGTG
GCGCCGCGGGGATTCCGGTGGCGCTTGCGGTGGTGCTTGCCTCTCTGCTT
CAATTCGTGGCGCTCTTGATGTCGCCGCTCTTTGAGTTCCGACCAACCCT
GACGGCGCGTCGCGTGGCGGAAGAGAGTCGAGCGTGGCGGTTTGACGTAT
CTAGGGCGAAGAGAGAGCTCGGGTACAAGCCCTTGTGGACCCAGGAGAGC
GTAGTTTTCGACGGCCAAGACTTGAAAGAGGTTTCAGAAGACGCGCCCTA
CGCAAGACATTTCATCGGCCCTGTTACAGCGGCAGCGGCGGACGCAGAGA
GGGCGGTGCTAGGCGCTAACAGCACCACGCGCAGCCGCGGTGATGAGTCG
GCGGAACCGGGGGCTGGAGGCATCGTGCCTTGTATGTCAACGTGCAGCAT
CCGTGCCGCCCCGATGTACGGCCCGGGAGAGTCAGAGTACGTCTTGCCGG
GGCTCGCGGGTCGCGCAAACGCGGGAACTCGCCCGGTCGGCGATGGAAGG
AACGTGGTAGATTTCGTCTTCGCGGGCAACGTGGCTCACGCCATGTTGCT
CGCGGCGCAGGAGCTTCTCGCTCCGATAGGGGGCGATTCCGACTCTGCCC
AGCCCACCCACTCGGCGGCTGCGGCGAGGACGGTCGCAGTCGCAGGGCGA
GCCTTTTTTGTAACGGATGAGGAACCGGTACCCTTCAGCGACTTCGCGGG
TCGCGCTCTATCTCGGCTTGGATACCCCGGGCCCGACGATGCCGGTGGCG
CCGCGGGGATTCCGGTGGCGCTTGCGGTGGTGCTTGCCTCTCTGCTTCAA
TTCGTGGCGCTCTTGATGTCGCCGCTCTTTGAGTTCCGACCAACCCTGAC
GGCGCGTCGCGTGGCGGAAGAGAGTCGAGCGTGGCGGTTTGACGTATCTA
GGGCGAAGAGAGAGCTCGGGTACAAGCCCTTGTGGACCCAGGAGGAGGGC
CTGGAGATGTCGCTGTGCTCGGCAGAGTGTCTCCGAAATCCTCGGGCGAA
GTTGAAGCACATAGGTCCGTTCACGGCGGAGGAGGTGGCTCGACACTCTA
CCGAGGACGATGCTTGGATTATCGTCGATGACAAGGTCGAGGGCCTGGAG
ATGTCGCTGTGCTCGGCAGAGTGTCTCCGAAATCCTCGGGCGAAGTTGAA
GCACATAGGTCCGTTCACGGCGGAGGAGGTGGCTCGACACTCTACCGAGG
ACGATGCTTGGATTATCGTCGATGACAAGGTC
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