prot_H-elongata_contig11211.984.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11211.984.1
Unique Nameprot_H-elongata_contig11211.984.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length151
Homology
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BLAST of mRNA_H-elongata_contig11211.984.1 vs. uniprot
Match: D8LTN4_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTN4_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.400e-15
Identity = 36/51 (70.59%), Postives = 39/51 (76.47%), Query Frame = 0 
Query:   31 VRPAKKRYPPNAWKRRCADGTCLVGASFGYEESSAVYCNAHKDAGIVNVTH 81
            V P KKR PPNAWKRRCADGTC +GASF      A YC+AH DAG+VNVTH
Sbjct:  429 VGPVKKRSPPNAWKRRCADGTCQLGASFAMRGEPAKYCSAHSDAGMVNVTH 479
[Close]
BLAST of mRNA_H-elongata_contig11211.984.1 vs. uniprot
Match: A0A6H5JT02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT02_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.490e-15
Identity = 36/51 (70.59%), Postives = 39/51 (76.47%), Query Frame = 0 
Query:   31 VRPAKKRYPPNAWKRRCADGTCLVGASFGYEESSAVYCNAHKDAGIVNVTH 81
            V P KKR PPNAWKRRCADGTC +GASF      A YC+AH DAG+VNVTH
Sbjct:  850 VGPVKKRSPPNAWKRRCADGTCQLGASFAMRGEPAKYCSAHSDAGMVNVTH 900
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11211.984.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTN4_ECTSI1.400e-1570.59EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JT02_9PHAE1.490e-1570.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11211contigH-elongata_contig11211:1474..3552 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11211.984.1mRNA_H-elongata_contig11211.984.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11211 1474..3552 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11211.984.1 ID=prot_H-elongata_contig11211.984.1|Name=mRNA_H-elongata_contig11211.984.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=151bp
DGDEDDDDFGSCGKDGGGNGGSGGGGGMRCVRPAKKRYPPNAWKRRCADG
TCLVGASFGYEESSAVYCNAHKDAGIVNVTHRRCEEPGCPHQPSFNMEGE
KAVYFRSHKRDGMINVSSPRCRSPGPVTQDFPLPSGSTTTPAAIADTSPE
P
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