prot_H-elongata_contig112088.983.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig112088.983.1
Unique Nameprot_H-elongata_contig112088.983.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length79
Homology
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BLAST of mRNA_H-elongata_contig112088.983.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 2.800e-24
Identity = 47/78 (60.26%), Postives = 57/78 (73.08%), Query Frame = 0 
Query:    3 LSAYLAMGYCCRSRLLTLPQKDSIMPSED-GVGFSAEIRWFRFSNASLPRPEFEEMRDDPEVCRPHTNDGGGKAFGYE 79
            +S+YLAMG+CCRSRLLTLP+ D+ MP +D G GF A  RWF FS  + P P FE++ D+PEVCRP   DG   AFGYE
Sbjct:  129 ISSYLAMGFCCRSRLLTLPEVDTAMPGDDEGGGFKAGERWFDFSRVTPPWPGFEQLGDNPEVCRPQMEDGADNAFGYE 206
[Close]
BLAST of mRNA_H-elongata_contig112088.983.1 vs. uniprot
Match: D7FRV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV8_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 2.330e-22
Identity = 44/71 (61.97%), Postives = 52/71 (73.24%), Query Frame = 0 
Query:    9 MGYCCRSRLLTLPQKDSIMPSEDGVGFSAEIRWFRFSNASLPRPEFEEMRDDPEVCRPHTNDGGGKAFGYE 79
            MG+CCRSRLLTLP  D  +P E    F++  RWF FSN ++P PE++EM DD EVCRP T DGG KAFGYE
Sbjct:    1 MGFCCRSRLLTLPATDDKLPDELD-NFTSARRWFDFSNVTVPWPEYQEMGDDQEVCRPETKDGGRKAFGYE 70
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112088.983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRV9_ECTSI2.800e-2460.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRV8_ECTSI2.330e-2261.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig112088contigH-elongata_contig112088:534..1223 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig112088.983.1mRNA_H-elongata_contig112088.983.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig112088 534..1244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig112088.983.1 ID=prot_H-elongata_contig112088.983.1|Name=mRNA_H-elongata_contig112088.983.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=79bp
MTLSAYLAMGYCCRSRLLTLPQKDSIMPSEDGVGFSAEIRWFRFSNASLP
RPEFEEMRDDPEVCRPHTNDGGGKAFGYE
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