prot_H-elongata_contig112058.977.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig112058.977.1
Unique Nameprot_H-elongata_contig112058.977.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length327
Homology
BLAST of mRNA_H-elongata_contig112058.977.1 vs. uniprot
Match: A0A6H5KP90_9PHAE (TRUD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP90_9PHAE)

HSP 1 Score: 393 bits (1010), Expect = 1.830e-125
Identity = 221/329 (67.17%), Postives = 250/329 (75.99%), Query Frame = 0
Query:    1 QGPIALLGNFSYVGQPLKLGNLSGNRFGIVLRNVNLPGFPAPGGEGESVNRAQSGPGDQAAGSPEAVNAEAARTEAEVVAAAGARLKKTIDHRCARVKERGFINYFGLQRFGTGGAPTSEVGLAMLKEDWEGAVRLVMTPRIGENEATHASKVHYLKNPTDIEGTLNKLPFFMHAEKSMMQVLLRGGANAHVDALKAVPKNLQLMYLHAFQSLLWNLAASERIELYGREGVVEGDLVFPRDS---TVSIDSSVADPEAGPFDSEGSALLNHEGGADDDDEATESRDVEDQDAKRPRKTPARLPDVHMVTNEDVKKRTFRLTDVVLPMPG 326
            QG I LLGNFSYV +PLKLG+LSGNRFGIVLRN++LP     GGE  +      G   Q A + EA   EA   EA VV   GA+LK+T+D RCA VKERGFINYFGLQRFG+GGAPTSEVGLAMLKEDW GAVRL+MTPR+GENEATHASKVHYLKNPTDI+GTLNKLPFFM AEKSMMQ LL+GG NAH+DALKAVPKNLQLMYLHAFQSLLWNLAASERI+LYGR+  VEGDLVFPRDS    +  D+++ DP  G      +A+   E   D +DE  E +  E   AKR +     LP VH+VT EDV++ TFRLTDVVLPMPG
Sbjct:  472 QGSIVLLGNFSYVAEPLKLGDLSGNRFGIVLRNLSLPS----GGENGAXXXXXGG---QDASADEASKKEAEYAEAAVVET-GAKLKETVDRRCAWVKERGFINYFGLQRFGSGGAPTSEVGLAMLKEDWAGAVRLIMTPRMGENEATHASKVHYLKNPTDIQGTLNKLPFFMDAEKSMMQALLKGGPNAHIDALKAVPKNLQLMYLHAFQSLLWNLAASERIKLYGRDAAVEGDLVFPRDSPAAAIEDDATLVDPAIGA-----AAVDAAERDGDGEDEGGEGQQPE---AKRAKTAETSLPPVHVVTKEDVEEGTFRLTDVVLPMPG 784          
BLAST of mRNA_H-elongata_contig112058.977.1 vs. uniprot
Match: A0A8J4CFZ8_9CHLO (TRUD domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CFZ8_9CHLO)

HSP 1 Score: 173 bits (439), Expect = 6.050e-45
Identity = 122/320 (38.12%), Postives = 168/320 (52.50%), Query Frame = 0
Query:    7 LGNFSYVGQPLKLGNLSGNRFGIVLRNVNLPGFPAPGGEGESVNRAQSGPGDQAAGSPEAVNAEAARTEAEVVAAAGARLKKTIDHRCARVKERGFINYFGLQRFGTGGAPTSEVGLAMLKEDWEGAVRLVMTPRIGENEATHASKVHYLKNPTDIEGTLNKLPFFMHAEKSMMQVLLRGGANAHVDALKAVPKNLQLMYLHAFQSLLWNLAASERIELYGREGVVEGDLVFPRDSTVSIDSSVADPEAGPFDSEGSALLNHEGGADDDDEATESRDVEDQDAKRPRKTPARLPDVHMVTNEDVKKRTFRLTDVVLPMPG 326
            +GNFS+  + L+LG LSGN F +++R+V L   P P           +   D     P+  +    + +++VVA         +   C  V   GFINYFGLQRFGTGGA T EVG A+L+ ++E A RLV+T R  E      ++  +  N  D +G L +LP FM  E++++ VL    A+    A+KAVP+ +++MYLHA+QS +WN AAS RI  YGR+GVV GDLV PR S  +               EG  LL   GG DD  E  E  D  +  A        RL    + T  DV+   + + DVVLP+PG
Sbjct:  320 VGNFSFCDEGLRLGCLSGNEFHLLMRDVRLAS-PEPPAVAXXXXXXTAITADGEEAGPKGTSG--TKIDSDVVA--------QVTAACETVARNGFINYFGLQRFGTGGAATQEVGKALLRGEYEKAARLVLTGRADERSDYADARRLFFDNG-DAKGALRRLPHFMLGERAVLSVLATDPAD-WAGAMKAVPRTMRMMYLHAWQSYVWNSAASHRIRTYGRDGVVAGDLVLPRSSATAAGG------------EGLMLL---GGVDDSGEGMEPEDESEGSAGT---VTRRLALARLATEADVEAGRYNIFDVVLPLPG 608          
BLAST of mRNA_H-elongata_contig112058.977.1 vs. uniprot
Match: A0A8J4AYV4_9CHLO (TRUD domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AYV4_9CHLO)

HSP 1 Score: 174 bits (440), Expect = 6.700e-45
Identity = 119/320 (37.19%), Postives = 165/320 (51.56%), Query Frame = 0
Query:    7 LGNFSYVGQPLKLGNLSGNRFGIVLRNVNLPGFPAPGGEGESVNRAQSGPGDQAAGSPEAVNAEAARTEAEVVAAAGARLKKTIDHRCARVKERGFINYFGLQRFGTGGAPTSEVGLAMLKEDWEGAVRLVMTPRIGENEATHASKVHYLKNPTDIEGTLNKLPFFMHAEKSMMQVLLRGGANAHVDALKAVPKNLQLMYLHAFQSLLWNLAASERIELYGREGVVEGDLVFPRDSTVSIDSSVADPEAGPFDSEGSALLNHEGGADDDDEATESRDVEDQDAKRPRKTPARLPDVHMVTNEDVKKRTFRLTDVVLPMPG 326
            +GNFS+    L+LG L GN F +++R+V L G   P    E+V       G +         A   + E +V+          +   C  V   GFINYFGLQRFGTGGA T EVG A+L+ ++E A RLV+T R  E  A +A          D +G L +LP FM  E++++ VL     +    A++AVP+ +++MYLHA+QS +WN +AS RI  YGR+ VV GDLV PR    +              S G+  L   GG DD  E  E+ D  +  A        RL  V +VT+ DV+   + + DVVLP+PG
Sbjct:  462 VGNFSFCDDGLRLGCLLGNEFHLLMRDVRLVGSEPPAATAEAVTAEGEEMGTE--------GASGTKVEVDVIG--------QVTIACETVARSGFINYFGLQRFGTGGAATQEVGKALLRGEYERAARLVLTGRADER-ADYAEARKLFSEMGDAKGALRRLPHFMLGERAVLAVLATNPTD-WAGAMRAVPRTMRMMYLHAWQSYVWNSSASHRIRTYGRDRVVAGDLVLPRSGATA--------------SGGAESLELGGGVDDSGEGMEAEDGSEGSAGT---VSRRLALVRLVTDADVEAGRYDIFDVVLPLPG 746          
BLAST of mRNA_H-elongata_contig112058.977.1 vs. uniprot
Match: A0A8J4GCG3_9CHLO (TRUD domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GCG3_9CHLO)

HSP 1 Score: 173 bits (439), Expect = 9.000e-45
Identity = 122/320 (38.12%), Postives = 168/320 (52.50%), Query Frame = 0
Query:    7 LGNFSYVGQPLKLGNLSGNRFGIVLRNVNLPGFPAPGGEGESVNRAQSGPGDQAAGSPEAVNAEAARTEAEVVAAAGARLKKTIDHRCARVKERGFINYFGLQRFGTGGAPTSEVGLAMLKEDWEGAVRLVMTPRIGENEATHASKVHYLKNPTDIEGTLNKLPFFMHAEKSMMQVLLRGGANAHVDALKAVPKNLQLMYLHAFQSLLWNLAASERIELYGREGVVEGDLVFPRDSTVSIDSSVADPEAGPFDSEGSALLNHEGGADDDDEATESRDVEDQDAKRPRKTPARLPDVHMVTNEDVKKRTFRLTDVVLPMPG 326
            +GNFS+  + L+LG LSGN F +++R+V L   P P           +   D     P+  +    + +++VVA         +   C  V   GFINYFGLQRFGTGGA T EVG A+L+ ++E A RLV+T R  E      ++  +  N  D +G L +LP FM  E++++ VL    A+    A+KAVP+ +++MYLHA+QS +WN AAS RI  YGR+GVV GDLV PR S  +               EG  LL   GG DD  E  E  D  +  A        RL    + T  DV+   + + DVVLP+PG
Sbjct:  447 VGNFSFCDEGLRLGCLSGNEFHLLMRDVRLAS-PEPPAVAXXXXXXTAITADGEEAGPKGTSG--TKIDSDVVA--------QVTAACETVARNGFINYFGLQRFGTGGAATQEVGKALLRGEYEKAARLVLTGRADERSDYADARRLFFDNG-DAKGALRRLPHFMLGERAVLSVLATDPAD-WAGAMKAVPRTMRMMYLHAWQSYVWNSAASHRIRTYGRDGVVAGDLVLPRSSATAAGG------------EGLMLL---GGVDDSGEGMEPEDESEGSAGT---VTRRLALARLATEADVEAGRYNIFDVVLPLPG 735          
BLAST of mRNA_H-elongata_contig112058.977.1 vs. uniprot
Match: A0A834SK78_9FABA (Multisubstrate pseudouridine synthase 7 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834SK78_9FABA)

HSP 1 Score: 156 bits (395), Expect = 2.960e-39
Identity = 92/227 (40.53%), Postives = 136/227 (59.91%), Query Frame = 0
Query:  101 GFINYFGLQRFGTGGAPTSEVGLAMLKEDWEGAVRLVMTPRIGENEATHASKVHYLKNPTDIEGTLNKLPFFMHAEKSMMQVLLRGGANAHVDALKAVPKNLQLMYLHAFQSLLWNLAASERIELYGREGVVEGDLVFPRDSTVSIDSSVADPE-AGPFDSEGSALLNHEGGADDDDEATESRDVEDQDAKRPRKTPARLPDVHMVTNEDVKKRTFRLTDVVLPMPG 326
            GFINYFGLQRFG+G  PT  +G A+L+ +W+ AV +++ PR GE +A   ++ +Y KN  D+EGTL +LP  + AE++++Q L +   N ++ ALKA+P+ L++MY+H++QS LWN AAS R++ YG E VV GDLV+ +D+ V  D+   D E     D    + LN E  AD         DV ++              V  VT +D+    + + DV+LPMPG
Sbjct:  306 GFINYFGLQRFGSGSVPTHLIGAALLRGEWKLAVDMILDPRTGERDAITKAREYY-KNSNDVEGTLKQLPRHLVAERAVLQCLKKSPEN-YLQALKAIPRTLRMMYVHSYQSYLWNHAASLRVQKYGTEQVVLGDLVYCKDNPVGKDTGFVDNELTNGCDDRYDSSLNEEEFAD--------MDVREESNSH----------VKAVTADDLNSGYYTIEDVILPMPG 512          
BLAST of mRNA_H-elongata_contig112058.977.1 vs. uniprot
Match: A0A2P6TL97_CHLSO (Multisubstrate pseudouridine synthase 7-like n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TL97_CHLSO)

HSP 1 Score: 156 bits (394), Expect = 5.770e-39
Identity = 94/235 (40.00%), Postives = 130/235 (55.32%), Query Frame = 0
Query:    7 LGNFSYVGQPLKLGNLSGNRFGIVLRNVNLPGFPAPGGEGESVNRAQSGPGDQAAGSPEAVNAEAARTEAEVVAAAGARLKKTIDHRCARVKERGFINYFGLQRFGTGGAPTSEVGLAMLKEDWEGAVRLVMTPRIGENEATHASKVHYLKNPTDIEGTLNKLPFFMHAEKSMMQVLLRGGANAHVDALKAVPKNLQLMYLHAFQSLLWNLAASERIELYGREGVVEGDLVFPRD 241
            LGNF +V + L+LG+L GNRF +VLRN+                        QA+ +  A  AEAA      VAAA   L+++           GFINY+GLQRFG+G  PT  +G ++L+  W  AVR ++TPR                   DIEG L ++P F+ AE  ++QVL R G N ++ A+ A+P+NL+ +Y+HA+QS LWN AAS R+E +G E VV GDLV  +D
Sbjct:  313 LGNFEFVSEQLRLGDLRGNRFELVLRNI------------------------QASSAGSAAEAEAA------VAAAAEGLRRS-----------GFINYYGLQRFGSGAVPTHRIGQSLLRGQWREAVRQLLTPRPDCTREDQVEAARLYLEEGDIEGALARMPRFLVAEPMLLQVLKRQGPNDYLSAVMALPRNLRTIYIHAYQSYLWNAAASHRVETFGAERVVAGDLVLLQD 506          
BLAST of mRNA_H-elongata_contig112058.977.1 vs. uniprot
Match: L1J8P3_GUITC (TRUD domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J8P3_GUITC)

HSP 1 Score: 154 bits (390), Expect = 9.590e-39
Identity = 111/322 (34.47%), Postives = 163/322 (50.62%), Query Frame = 0
Query:    7 LGNFSYVGQPLKLGNLSGNRFGIVLRNVNLPGFPAPGGEGESVNRAQSGPGDQAAGSPEAVNAEAARTEAEVVAAAGARLKKTIDHRCARVKERGFINYFGLQRFGTGGAPTSEVGLAMLKEDWEGAVRLVMTPRIGENEATHASKVHYLKNPTDIEGTLNKLPFFMHAEKSMMQVLLRGGANAHVDALKAVPKNLQLMYLHAFQSLLWNLAASERIELYGREGVVEGDLVFPRDSTVSIDSSVADPEAGPFDSEGSALLNHEGGADDDDEATES--RDVEDQDAKRPRKTPARLPDVHMVTNEDVKKRTFRLTDVVLPMPG 326
            +GN S   Q LKLG L GNRF I+LR+V                         + GS EA+                          C  +KE+GFINYFG QRFGT   PT  +G  +L EDWE A  L++ PR GE E +  ++  + K   D    L + P +M AE++++ V  + G N+H++AL+A+P+NL+LMY+H++QS +WN   SER+ +YG++  VEGDLV        ++S   + E+  FD EG             DE+T S     E+Q++   + T +    V ++   DV K  + + DVVLP+PG
Sbjct:  245 IGNLSVCEQTLKLGQLYGNRFQIILRDVQA-----------------------SEGSIEAL--------------------------CNSLKEKGFINYFGKQRFGTSSIPTYSIGREILHEDWEKAADLILCPRDGEKEESKTAREKF-KEHKDPAKALEEFPRWMFAERTLLDVYKKRGMNSHLNALQALPRNLRLMYIHSYQSYIWNKMVSERLRMYGKDRPVEGDLV--------LESKDVESES-LFDLEGV------------DESTLSGANASEEQESDHDKWTKSHPKKVKVLAASDVDK--YSIFDVVLPLPG 493          
BLAST of mRNA_H-elongata_contig112058.977.1 vs. uniprot
Match: UPI001CB9CF69 (multisubstrate pseudouridine synthase 7 isoform X1 n=2 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9CF69)

HSP 1 Score: 155 bits (392), Expect = 1.040e-38
Identity = 92/232 (39.66%), Postives = 135/232 (58.19%), Query Frame = 0
Query:   99 ERGFINYFGLQRFGTGGAPTSEVGLAMLKEDWEGAVRLVMTPRIGENEATHASKVHYLKNPTDIEGTLNKLPFFMHAEKSMMQVLLRGGANAHVDALKAVPKNLQLMYLHAFQSLLWNLAASERIELYGREGVVEGDLVFPRDSTVS----IDSSVADPEAGPFDSEGSALLNHEGGADDDDEATESRDVEDQDAKRPRKTPARLPDVHMVTNEDVKKRTFRLTDVVLPMPG 326
            + GFINYFG+QRFG+G  PT  +G  +LK +WE AVR+++ PR GE +   + + +Y K   DI+GTL +LP F+ AEK+++Q L +   N ++ ALKAVP+ L++MY+H++QS LWN AAS R++ YG + VV GDLV+  +   +    ID SV + E GP                      ES + +  D      +      V +V NED+    + +TDVVLP+PG
Sbjct:  376 KHGFINYFGMQRFGSGSIPTHLIGAKLLKGEWEEAVRMILDPRDGERDDIRSIREYY-KESEDIDGTLRQLPRFLVAEKAILQCLKKCPGN-YLQALKAVPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDHVVLGDLVYCNEENSNEIKQIDDSVYE-EIGP---------------------NESSENDHLDESETHVSEGNCTSVKVVNNEDIASGHYTVTDVVLPLPG 583          
BLAST of mRNA_H-elongata_contig112058.977.1 vs. uniprot
Match: A0A7S1SQ98_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SQ98_9CHLO)

HSP 1 Score: 144 bits (362), Expect = 1.130e-38
Identity = 77/141 (54.61%), Postives = 97/141 (68.79%), Query Frame = 0
Query:   97 VKERGFINYFGLQRFGTGGAPTSEVGLAMLKEDWEGAVRLVMTPRIGENEATHASKVHYLKNPTDIEGTLNKLPFFMHAEKSMMQVLLRGGANAHVDALKAVPKNLQLMYLHAFQSLLWNLAASERIELYGREGVVEGDLV 237
            + +RGF+NYFGLQRFG GGA T EVG+ +LK  WE AVR +M PR  E   + A K  YL+   DI+G L  LP FM  E+SM++ L R   +  V AL  +P+N++ MYLH++QSLLWNLAASERI L+G E  V GDLV
Sbjct:   26 IAQRGFVNYFGLQRFGQGGAGTHEVGVLLLKGHWEAAVRAIMAPRSDERVDSLAVKKAYLEQG-DIKGALAALPRFMAVERSMLEALGRNPKD-FVGALGCIPRNMRTMYLHSYQSLLWNLAASERIALFGAEAPVAGDLV 164          
BLAST of mRNA_H-elongata_contig112058.977.1 vs. uniprot
Match: A0A2P6V0Y5_9CHLO (Multisubstrate pseudouridine synthase 7 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V0Y5_9CHLO)

HSP 1 Score: 154 bits (388), Expect = 4.160e-38
Identity = 90/233 (38.63%), Postives = 127/233 (54.51%), Query Frame = 0
Query:   97 VKERGFINYFGLQRFGTGGAPTSEVGLAMLKEDWEGAVRLVMTPRIGENEATHASKVHYLKNPTDIEGTLNKLPFFMHAEKSMMQVLLRGGANAHVDALKAVPKNLQLMYLHAFQSLLWNLAASERIELYGREGVVEGDLVFPRDSTVSIDSSVADPEAGPF---DSEGSALLNHEGGADDDDEATESRDVEDQDAKRPRKTPARLPDVHMVTNEDVKKRTFRLTDVVLPMPG 326
            +++ GF+NY+GLQRFGTGG PT  VG A+L+  W  AVR+++TPR   + A  A          DIEG L ++P F+ AE  ++Q L + G + +++AL  +P+NL+ MY+HA+QS LWN AAS RI  YG    V+GDLV  +    +   + A     P    D+EG A    EG         E RD             A   +VH+VT  +    T+ + DVVLP+PG
Sbjct:  312 LRDTGFVNYYGLQRFGTGGVPTHRVGAALLRGQWREAVRMLLTPRPDCSRADQAEACRLYLEEGDIEGALRRMPRFLVAEPLLLQALKQHGPSGYLNALSTLPRNLRTMYIHAYQSYLWNSAASHRIATYGAAAAVQGDLVLTQSGDAA--RAAARNRGRPRLQEDAEGEAAAGAEG---------EGRDAAXXXXXXXXXXXAAGEEVHVVTAAEAAAGTYSIDDVVLPLPG 533          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig112058.977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KP90_9PHAE1.830e-12567.17TRUD domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A8J4CFZ8_9CHLO6.050e-4538.13TRUD domain-containing protein n=1 Tax=Volvox reti... [more]
A0A8J4AYV4_9CHLO6.700e-4537.19TRUD domain-containing protein n=1 Tax=Volvox afri... [more]
A0A8J4GCG3_9CHLO9.000e-4538.13TRUD domain-containing protein n=2 Tax=Volvox reti... [more]
A0A834SK78_9FABA2.960e-3940.53Multisubstrate pseudouridine synthase 7 n=1 Tax=Se... [more]
A0A2P6TL97_CHLSO5.770e-3940.00Multisubstrate pseudouridine synthase 7-like n=1 T... [more]
L1J8P3_GUITC9.590e-3934.47TRUD domain-containing protein n=1 Tax=Guillardia ... [more]
UPI001CB9CF691.040e-3839.66multisubstrate pseudouridine synthase 7 isoform X1... [more]
A0A7S1SQ98_9CHLO1.130e-3854.61Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A2P6V0Y5_9CHLO4.160e-3838.63Multisubstrate pseudouridine synthase 7 n=1 Tax=Mi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042214Pseudouridine synthase, TruD, catalytic domainGENE3D3.30.2350.20coord: 3..54
e-value: 9.0E-6
score: 26.7
coord: 73..128
e-value: 1.9E-7
score: 32.2
IPR042214Pseudouridine synthase, TruD, catalytic domainGENE3D3.30.2350.20coord: 181..267
e-value: 1.7E-8
score: 36.2
IPR001656Pseudouridine synthase, TruDPFAMPF01142TruDcoord: 12..243
e-value: 1.5E-36
score: 126.1
IPR001656Pseudouridine synthase, TruDPANTHERPTHR13326TRNA PSEUDOURIDINE SYNTHASE Dcoord: 7..326
NoneNo IPR availablePANTHERPTHR13326:SF21PSEUDOURIDYLATE SYNTHASE 7 HOMOLOGcoord: 7..326
IPR011760Pseudouridine synthase, TruD, insertion domainPROSITEPS50984TRUDcoord: 101..326
score: 29.067
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 7..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig112058contigH-elongata_contig112058:176..1966 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig112058.977.1mRNA_H-elongata_contig112058.977.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig112058 176..1966 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig112058.977.1 ID=prot_H-elongata_contig112058.977.1|Name=mRNA_H-elongata_contig112058.977.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=327bp
QGPIALLGNFSYVGQPLKLGNLSGNRFGIVLRNVNLPGFPAPGGEGESVN
RAQSGPGDQAAGSPEAVNAEAARTEAEVVAAAGARLKKTIDHRCARVKER
GFINYFGLQRFGTGGAPTSEVGLAMLKEDWEGAVRLVMTPRIGENEATHA
SKVHYLKNPTDIEGTLNKLPFFMHAEKSMMQVLLRGGANAHVDALKAVPK
NLQLMYLHAFQSLLWNLAASERIELYGREGVVEGDLVFPRDSTVSIDSSV
ADPEAGPFDSEGSALLNHEGGADDDDEATESRDVEDQDAKRPRKTPARLP
DVHMVTNEDVKKRTFRLTDVVLPMPG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042214TruD_catalytic
IPR001656PsdUridine_synth_TruD
IPR011760PsdUridine_synth_TruD_insert
IPR020103PsdUridine_synth_cat_dom_sf