prot_H-elongata_contig111804.959.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig111804.959.1
Unique Nameprot_H-elongata_contig111804.959.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length199
Homology
BLAST of mRNA_H-elongata_contig111804.959.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 270 bits (691), Expect = 8.850e-83
Identity = 142/171 (83.04%), Postives = 147/171 (85.96%), Query Frame = 0
Query:   10 MVDVIRSSARVPEKKDCVTTMRTVKTAMMEKVSRLIQGEHVCITSDEWTSCANETYMSLTVTLITSAWKLVTLSMDCSKSEGTTTGDTLAVGIKAAVAKHGLTGKVTVVTTDCEPLMVKMGRLLE-EGNVCTHIGCCNHRLESIISIVFNGSGVKKVMVLARGLVTRYSTS 179
            MV  IR SARVPEKKDCVTTMRTVK  MMEKVSRLI+GE VCITSD WTSCAN+TYMSLT TLITSAWKLVTLS+DCSKSEGTTTGD LA GIKA VAKHGLTGKVT VTTDCEP MVKMGRLL  +  V T IGCCN+RLES  SIVFNG  VKKVMVLARGLVTRY TS
Sbjct:    1 MVHAIRPSARVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTS 171          
BLAST of mRNA_H-elongata_contig111804.959.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 1.060e-44
Identity = 87/190 (45.79%), Postives = 119/190 (62.63%), Query Frame = 0
Query:    1 MLADKSFKGMVDVIRSSARVPEKKDCVTTMRTVKTAMMEKVSRLIQGEHVCITSDEWTSCANETYMSLTVTLITSAWKLVTLSMDCSKSEGTTTGDTLAVGIKAAVAKHGLTGKVTVVTTDCEPLMVKMGRLLEEGNVCTHIGCCNHRLESIISIVFNGSGVKKVMVLARGLVTRYSTSRHGNQVLVHMQ 190
            M+ ++ F  MV  ++S A VP K+  +  +R +K  + ++V   + GEHV +TSD WTS +N+TYM  T T I+S + LV L ++C K  G TTG+ L   +KA +A++GLT +    TTDCEP MVK GRLLEE    TH+GC  HRLESI S  F G GV K + LAR +VTRY+ S   +  L  M+
Sbjct:    1 MVENEHFIEMVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMR 190          
BLAST of mRNA_H-elongata_contig111804.959.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 6.740e-42
Identity = 85/171 (49.71%), Postives = 112/171 (65.50%), Query Frame = 0
Query:   10 MVDVIRSSARVPEKKDCVTTMRTVKTAMMEKVSRLIQGEHVCITSDEWTSCANETYMSLTVTLITSAWKLVTLSMDCSKSEGTTTGDTLAVGIKAAVAKHGLTGKVTVVTTDCEPLMVKMGRLLE-EGNVCTHIGCCNHRLESIISIVFNGSGVKKVMVLARGLVTRYSTS 179
            MV  +   A+VP +++ ++ MR VKTA+  +V+ ++  E V IT+D WTS  NE+YMSLTV  I   WKL  LS+DC+K  GTTTG+ LA  +   V +H LTG+V    TDCEP M+K GRLLE +G+  +HIGC NHR+ES  S VFNG  +   + LAR LV RY  S
Sbjct:    1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKS 170          
BLAST of mRNA_H-elongata_contig111804.959.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 2.780e-37
Identity = 80/174 (45.98%), Postives = 108/174 (62.07%), Query Frame = 0
Query:    7 FKGMVDVIRSSARVPEKKDCVTTMRTVKTAMMEKVSRLIQGEHVCITSDEWTSCANETYMSLTVTLITSAWKLVTLSMDCSKSEGTTTGDTLAVGIKAAVAKHGLTGKVTVVTTDCEPLMVKMGRLLEEGNV-CTHIGCCNHRLESIISIVFNGSGVKKVMVLARGLVTRYSTS 179
            F  +V  +   AR P ++  V  MR +K  +  +V+ ++  E+V IT+D WTS +NE+YMSLTV  I   W+L  LS++C+K  G+T G+ LA  I + + +HGLTG+VT   TDCEP MVK GRLLE G     HIGC NHR+ES  S VFNG  +   +  AR +V RY  S
Sbjct:   34 FHAVVSGLNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRS 206          
BLAST of mRNA_H-elongata_contig111804.959.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 2.450e-36
Identity = 73/140 (52.14%), Postives = 92/140 (65.71%), Query Frame = 0
Query:   47 GEHVCITSDEWTSCANETYMSLTVTLITSAWKLVTLSMDCSKSEGTTTGDTLAVGIKAAVAKHGLTGKVTVVTTDCEPLMVKMGRLLEEGNVCTHIGCCNHRLESIISIVFNGSGVKKVMVLARGLVTRYSTSRHGNQVL 186
            GEHV +TSD WT  +N+TYMS T T I+S + LV L ++C K    T G+ L   +KA +A++GLTG+   +TTDCE  MVK GRLLEE    TH+GC  HRLESI S  F G GV K + LARG+VTRY+ S   +  L
Sbjct:    3 GEHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRL 142          
BLAST of mRNA_H-elongata_contig111804.959.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 1.010e-30
Identity = 64/131 (48.85%), Postives = 83/131 (63.36%), Query Frame = 0
Query:   59 SCANETYMSLTVTLITSAWKLVTLSMDCSKSEGTTTGDTLAVGIKAAVAKHGLTGKVTVVTTDCEPLMVKMGRLLEEGNVCTHIGCCNHRLESIISIVFNGSGVKKVMVLARGLVTRYSTSRHGNQVLVHM 189
            S +N+TYM+ T T I+S + LV L ++  K  G TTG+ L   +KA +A++GLTG+    TTDCEP MVK GRLLEE    +H+GC  HR ESI S  F G GV K + L RG+VTRY+ S   +  L  M
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQM 133          
BLAST of mRNA_H-elongata_contig111804.959.1 vs. uniprot
Match: UPI00096AF313 (zinc finger BED domain-containing protein 1-like n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00096AF313)

HSP 1 Score: 71.6 bits (174), Expect = 4.150e-11
Identity = 53/190 (27.89%), Postives = 84/190 (44.21%), Query Frame = 0
Query:    7 FKGMVDVIRSSARVPEKKDCVTTMRTV----KTAMMEKVSRLIQGEHVCITSDEWTSCANETYMSLTVTLITSAWKLVTLSMDCSKSEGTTTGDTLAVGIKAAVAKHGLT--GKVTVVTTDCEPLMVKMGRLLEEGNVCTHIGCCNHRLESIISIVFNGSGVKKVMVLARGLVTRYSTSRHGNQVLVHMQ 190
            F  +++ I    ++P      + +R      K AMM+++    +      TSD WTSCAN+ Y+SLT   I S W+LV+  +  S   G  TG  +   +K      G     ++  +  D    MV  G +LEE   C  + C  HRL+  I    + S + + +  A+ LVT +  S   +  L   Q
Sbjct:  142 FCALLNYIEPGYKIPSDTHIASVIRQKHEVGKRAMMQRLKN--ENAFTAFTSDIWTSCANDAYISLTAHFIDSDWQLVSCVLGSSPFPGHHTGSHIYEKLKDITHAFGFQQHSQLVALVHDAASNMVLSGEILEERLECASVCCAAHRLQLCIEDGLSVSAISRAVGAAKKLVTHFRHSALASDALKKKQ 329          
BLAST of mRNA_H-elongata_contig111804.959.1 vs. uniprot
Match: A0A1X7UW18_AMPQE (BED-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UW18_AMPQE)

HSP 1 Score: 71.6 bits (174), Expect = 4.360e-11
Identity = 53/190 (27.89%), Postives = 84/190 (44.21%), Query Frame = 0
Query:    7 FKGMVDVIRSSARVPEKKDCVTTMRTV----KTAMMEKVSRLIQGEHVCITSDEWTSCANETYMSLTVTLITSAWKLVTLSMDCSKSEGTTTGDTLAVGIKAAVAKHGLT--GKVTVVTTDCEPLMVKMGRLLEEGNVCTHIGCCNHRLESIISIVFNGSGVKKVMVLARGLVTRYSTSRHGNQVLVHMQ 190
            F  +++ I    ++P      + +R      K AMM+++    +      TSD WTSCAN+ Y+SLT   I S W+LV+  +  S   G  TG  +   +K      G     ++  +  D    MV  G +LEE   C  + C  HRL+  I    + S + + +  A+ LVT +  S   +  L   Q
Sbjct:  139 FCALLNYIEPGYKIPSDTHIASVIRQKHEVGKRAMMQRLKN--ENAFTAFTSDIWTSCANDAYISLTAHFIDSDWQLVSCVLGSSPFPGHHTGSHIYEKLKDITHAFGFQQHSQLVALVHDAASNMVLSGEILEERLECASVCCAAHRLQLCIEDGLSVSAISRAVGAAKKLVTHFRHSALASDALKKKQ 326          
BLAST of mRNA_H-elongata_contig111804.959.1 vs. uniprot
Match: UPI001F4FE454 (E3 SUMO-protein ligase ZBED1-like n=6 Tax=Schistocerca TaxID=7008 RepID=UPI001F4FE454)

HSP 1 Score: 67.8 bits (164), Expect = 8.550e-10
Identity = 47/155 (30.32%), Postives = 74/155 (47.74%), Query Frame = 0
Query:    1 MLADKSFKGMVDVIRSSARVPEKKDCVTTM-RTVKTAMMEKV-SRLIQGEHVCITSDEWTSCANETYMSLTVTLITSAWKLVTLSMDCSKSEGTTTGDTLAVGIKAAVAKHGLTGKVTVVTTDCEPLMVKMGRLLEEGNVCTHIGCCNHRLESII 153
            ++ D  F+G V  +     +P +K     M +   TA  EKV  +L   + VC+T+D WTS ANE YM++T   ++  + L ++ + CS+  G  T   L+  +        LT KV +V TD  P +     +L+      H GC  H L  I+
Sbjct:  129 VVEDSGFRGFVRALNPGYELPSRKHISDVMLQAAYTAAKEKVVDKLSAAKTVCLTTDCWTSAANEGYMAVTGHFVSEDFTLQSVLLGCSQLSGAHTAPNLSASLIGTTDNFRLTDKVLLVVTDNAPNIKNAVSILK----WKHFGCYAHTLNLIV 279          
BLAST of mRNA_H-elongata_contig111804.959.1 vs. uniprot
Match: UPI00148AD8D1 (zinc finger BED domain-containing protein 1-like n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148AD8D1)

HSP 1 Score: 65.9 bits (159), Expect = 3.670e-9
Identity = 51/172 (29.65%), Postives = 79/172 (45.93%), Query Frame = 0
Query:   21 PEKKDCVTTMRTVKTAMMEKVSRLI--QGEHVCITSDEWTSCANETYMSLTVTLITSAWKLVTLSMDCSKSEGTTTGDTLAVGIKAAVAKHGLTGKVTVVTTDCEPLMVKMGRLLEEGNVCTHIGCCNHRLESIISIVFNGSGVKKVMVLARGLVTRYSTSRHGNQVLVHMQ 190
            P K + +  M   K  M EKV+R +  +   + IT D W+SCA E+Y ++T   ITSAW+L ++ +   + +G+ T + +A G+K  V+   L     V  TD      K   +L         GC  HR+  I+        V K++   R LV  +  S   N  L+  Q
Sbjct:  157 PTKHEILKLMNEKKIKMAEKVARDLPPKSGSIAITHDGWSSCATESYSTVTAHFITSAWELRSVVLHTHQVQGSHTSEKIADGLKETVSTWNLPDPTCV--TDNAANEKKAVEILG----WERSGCYGHRINLIVKHALEVPEVHKILSKCRKLVGHFHKSTSLNDCLIEKQ 322          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig111804.959.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7Y8_9PHAE8.850e-8383.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJV8_9PHAE1.060e-4445.79Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LCS5_ECTSI6.740e-4249.71Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE2.780e-3745.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHP9_9PHAE2.450e-3652.14Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5KVI1_9PHAE1.010e-3048.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00096AF3134.150e-1127.89zinc finger BED domain-containing protein 1-like n... [more]
A0A1X7UW18_AMPQE4.360e-1127.89BED-type domain-containing protein n=1 Tax=Amphime... [more]
UPI001F4FE4548.550e-1030.32E3 SUMO-protein ligase ZBED1-like n=6 Tax=Schistoc... [more]
UPI00148AD8D13.670e-929.65zinc finger BED domain-containing protein 1-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007021Domain of unknown function DUF659PFAMPF04937DUF659coord: 38..166
e-value: 2.7E-8
score: 33.8
NoneNo IPR availablePANTHERPTHR46169:SF3coord: 1..188
NoneNo IPR availablePANTHERPTHR46169FAMILY NOT NAMEDcoord: 1..188
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 38..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig111804contigH-elongata_contig111804:1354..2021 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig111804.959.1mRNA_H-elongata_contig111804.959.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig111804 1164..2027 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig111804.959.1 ID=prot_H-elongata_contig111804.959.1|Name=mRNA_H-elongata_contig111804.959.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp
MLADKSFKGMVDVIRSSARVPEKKDCVTTMRTVKTAMMEKVSRLIQGEHV
CITSDEWTSCANETYMSLTVTLITSAWKLVTLSMDCSKSEGTTTGDTLAV
GIKAAVAKHGLTGKVTVVTTDCEPLMVKMGRLLEEGNVCTHIGCCNHRLE
SIISIVFNGSGVKKVMVLARGLVTRYSTSRHGNQVLVHMQHGSATVRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007021DUF659
IPR012337RNaseH-like_sf