prot_H-elongata_contig11174.955.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11174.955.1
Unique Nameprot_H-elongata_contig11174.955.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length541
Homology
BLAST of mRNA_H-elongata_contig11174.955.1 vs. uniprot
Match: D7FLG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG4_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 1.760e-75
Identity = 131/215 (60.93%), Postives = 162/215 (75.35%), Query Frame = 0
Query:  258 VGLGEVVPALMKSGAAFLVGTWLAKKLSPSVAGQVRAARIVYTGYLISSQALCMYLRYLIWQRDDDTDVAVPPPPQLKKMVEGVGGAGTAAAAGEKAGAALSGVAEGAASPLAPMLEKLLTSRTPAKEYDMKVVQGMRRGQFWASLFMCFTHLKRGMIKPMILQVSFGVLALLDSPLFKIYVLGRQAEGDLARPFRKQGFMASLSGPMEGLAAKA 472
            V L  V+P  +K  A FL+  WL K LSP+V  QVRAAR +YT YLI SQALCMY+RYLIW++ DDT+V VPPP QLKK+++  G AG      E A AA        ASPL P+++K++TSR   K+YDMK +QG+RR QFWASL MC+THL+RGMIKPM+ QVSFGVL+LLD+PL  IY+LGR+A+G+LARPF+KQG M SLSGPME +A KA
Sbjct:    4 VDLKVVLPQAIKQLAFFLLARWLNKSLSPTVESQVRAARAIYTVYLIVSQALCMYIRYLIWKKGDDTEVEVPPPAQLKKLIQDAGKAGVTG--NEGAPAATXXXXXXXASPLGPVMDKMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQVSFGVLSLLDNPLVHIYLLGREAKGNLARPFKKQGLMESLSGPMETMATKA 216          
BLAST of mRNA_H-elongata_contig11174.955.1 vs. uniprot
Match: A0A6H5KF45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF45_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 1.100e-70
Identity = 127/215 (59.07%), Postives = 158/215 (73.49%), Query Frame = 0
Query:  258 VGLGEVVPALMKSGAAFLVGTWLAKKLSPSVAGQVRAARIVYTGYLISSQALCMYLRYLIWQRDDDTDVAVPPPPQLKKMVEGVGGAGTAAAAGEKAGAALSGVAEGAASPLAPMLEKLLTSRTPAKEYDMKVVQGMRRGQFWASLFMCFTHLKRGMIKPMILQVSFGVLALLDSPLFKIYVLGRQAEGDLARPFRKQGFMASLSGPMEGLAAKA 472
            V L  V+P  +K  A FL+  WL   LSP V  QVRAAR +YT YL+ SQALCMY+RYLIW++DDD +V VPPP QLKK+++  G AG      E A A        AASPL P+++K++TSR   K+YDMK +QG+RR QFWASL MC+THL+RGMIKPM+ QVSFGVL+ LD+PL  IY+LGR+A+G+LARPF+KQG M SLSG ME +A KA
Sbjct:  228 VNLKVVLPQAIKQLAFFLLARWLNMSLSPKVESQVRAARAIYTVYLMVSQALCMYIRYLIWKKDDDAEVEVPPPAQLKKLIQDAGKAGVTG--NEGAAATXXXXXXXAASPLGPVMDKMMTSRMAVKKYDMKFIQGVRRRQFWASLMMCYTHLRRGMIKPMMFQVSFGVLSFLDNPLVHIYLLGREAKGNLARPFKKQGLMESLSGSMEAMATKA 440          
BLAST of mRNA_H-elongata_contig11174.955.1 vs. uniprot
Match: A0A7S2YS16_9STRA (Hypothetical protein (Fragment) n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YS16_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.990e-12
Identity = 66/210 (31.43%), Postives = 101/210 (48.10%), Query Frame = 0
Query:  280 LAKKL---SPSVAGQVRAARIVYTGYLISSQALCMYLRYLIWQRDDDTDVAVPPP--PQLKKMVEGVGGAGTAAAAGEKAGAALSGVAEGAASPLAPMLEKLLTSRTPAKEYDMKVVQGMRRGQFWASLFMCFTHLKRGMIKPMILQVSFGVLALLDSPLFKIYVLGRQAEGDLARPFRKQGFMASLSGPMEGLAAKAEEARVAAEAASE 484
            +AK+L   SP VA     AR VY GY+I  Q    ++R    + ++ T + V  P    L+  ++G+GG                    G+   +  +   LL+S T   EYD+K  + M+RG  +   F  F H K   ++P+++Q   G L +  SPLF++YVLGR  E    RPF+      S    ++ L A+A EA+  AE A+E
Sbjct:  192 IAKRLDLTSPKVAA---LARGVYIGYIIVLQLFLAFVRIKAKEANNRTPITVNNPLSSALQGQLDGLGG--------------------GSNGMVKMLASSLLSSSTSVMEYDLKEAKNMQRGLLFNMAFQWFLHFKMKQVQPLLIQTGSGFLNMFYSPLFQVYVLGRNLE----RPFKTN---TSSMAKLQELQAQAAEAQAKAEGATE 371          
BLAST of mRNA_H-elongata_contig11174.955.1 vs. uniprot
Match: B8C4Z3_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4Z3_THAPS)

HSP 1 Score: 80.5 bits (197), Expect = 3.260e-12
Identity = 52/176 (29.55%), Postives = 94/176 (53.41%), Query Frame = 0
Query:  292 VRAARIVYTGYLISSQALCMYLRYLIWQRDDDTDVAVPPPPQLKKMVEGVGGAGTAAAAGEKAGAALSGVAEGAASPLAPMLEKLLTSRTPAKEYDMKVVQGMRRGQFWASLFMCFTHLKRGMIKPMILQVSFGVLALLDSPLFKIYVLGRQAEGDLARPFRKQGFMASLSGPMEG 467
            VR AR+ +  Y+I+ +   +Y+R  + Q++D T + +  P  L  ++EG+          +K G        G  + +  +  ++L++ T   EYD++ ++ M  G  +  +F+ F H +   ++P+++Q + GV+ L+ SPL+++YVLGR  E    RPF K G    L G MEG
Sbjct:  491 VRIARLAFVAYIIAVEVFLLYVRLRVKQQNDRTPITISNP--LAGIIEGI----------QKDG--------GGGAMVKNLANQMLSTHTTIYEYDLQQIKKMNSGLLFPMVFLYFLHFRMKQVQPLLMQTATGVMNLVYSPLWQVYVLGRNLE----RPF-KVGGANPLLGAMEG 641          
BLAST of mRNA_H-elongata_contig11174.955.1 vs. uniprot
Match: A0A7S0GIX0_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GIX0_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.270e-11
Identity = 60/183 (32.79%), Postives = 88/183 (48.09%), Query Frame = 0
Query:  279 WLAKKLSPSVAGQVRAARIVYTGYLISSQALCMYLRYLIWQRDDDTDVAVPPPPQLKKMVEGVGGAGTAAAAGEKAGAALSGVAEGAASPLAPMLEKLLTSRTPAKEYDMKVVQGMRRGQFWASLFMCFTHLKRGMIKPMILQVSFGVLALLDSPLFKIYVLGRQAEGDLARPFRKQGFMASL 461
            +L +KL P     V  AR  + GY+I  QA   Y R +   R++ T + +        M + V    ++A + +  G +     +G    +  +  KLL+S +   EYDMK     R       LF    H K G ++P+ LQ S G+++L+ SPLF+IYVLGR  E    RPF K G  A L
Sbjct:  116 FLTRKLDPKDRKIVMIARFTFIGYMIIMQAFLTYARIMARMRNNRTPITI-----TNAMADMVKTQLSSAISKQTPGGSKG---QGENDMVKGLTSKLLSSESTVMEYDMKQAASARSSLLMPLLFTWVIHFKFGQVQPLFLQASSGIVSLIYSPLFQIYVLGRNLE----RPF-KTGLGAGL 285          
BLAST of mRNA_H-elongata_contig11174.955.1 vs. uniprot
Match: A0A6U1VB83_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1VB83_TRICV)

HSP 1 Score: 76.3 bits (186), Expect = 1.710e-11
Identity = 56/178 (31.46%), Postives = 83/178 (46.63%), Query Frame = 0
Query:  279 WLAKKLSPSVAGQVRAARIVYTGYLISSQALCMYLRYLIWQRDDDTDVAVPPPPQLKKMVEGVGGAGTAAAAGEKAGAALSGVAEGAASPLAPMLEKLLTSRTPAKEYDMKVVQGMRRGQFWASLFMCFTHLKRGMIKPMILQVSFGVLALLDSPLFKIYVLGRQAEGDLARPFRKQG 456
            +LA+K   +    V+ AR  Y  YL+ +Q    Y+R      DD T + +  P       +   G G     G  A  +L+G              + L+S+T A EYD+K  + M     +  LF+   H K G ++P+ILQ + G+  L  SPLF++YVLGR  E    RPF+  G
Sbjct:  128 FLARKFDLNDKRVVKIARFAYIAYLVLTQIFLAYVRIRAKSLDDRTPLTIQNPLSSALQSQLASG-GAXXXXGADAVKSLAG--------------QFLSSQTTAVEYDLKQAKSMSNSLLFPMLFLWVLHFKMGQVQPLILQTASGLSNLFYSPLFQVYVLGRNLE----RPFKSSG 286          
BLAST of mRNA_H-elongata_contig11174.955.1 vs. uniprot
Match: A0A7S2C1H3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1H3_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 5.050e-10
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 0
Query:  367 SPLAPMLEKLLTSRTPAKEYDMKVVQGMRRGQFWASLFMCFTHLKRGMIKPMILQVSFGVLALLDSPLFKIYVLGRQAEGDLARPFR 453
            SP++ +   L    T AKEYDMK+V+     QF+  L M   H K    K ++L     +L L  S LF+I++LGR+A GDLARPF+
Sbjct:    2 SPISGIASALSKKPTTAKEYDMKLVKQEISSQFFPMLMMYVLHFKAAWHKAIVLAPVSSLLQLFSSQLFQIHILGREATGDLARPFK 88          
BLAST of mRNA_H-elongata_contig11174.955.1 vs. uniprot
Match: A0A7S2KRT9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KRT9_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 6.880e-10
Identity = 46/178 (25.84%), Postives = 88/178 (49.44%), Query Frame = 0
Query:  279 WLAKKLSPSVAGQVRAARIVYTGYLISSQALCMYLRYLIWQRDDDTDVAVPPPPQLKKMVEGVGGAGTAAAAGEKAGAALSGVAEGAASPLAPMLEKLLTSRTPAKEYDMKVVQGMRRGQFWASLFMCFTHLKRGMIKPMILQVSFGVLALLDSPLFKIYVLGRQAEGDLARPFRKQG 456
            +L++++    A  VR AR  +  Y+++ Q   +Y+R+     +D T++ +  P  L  +V+G  G              +          +  + +++L+S T   EYD+   + M  G     +F+ F H +   ++P+++Q + GV+ ++ SPLF++YVLGR  E    RPF+  G
Sbjct:  109 FLSQRIDILDAKTVRIARFAFVAYIVTMQLFLLYVRFRAKAINDRTEITLSNP--LASLVQGAAGXXXXXXXXXXXXNFM----------VKALADQMLSSTTTIYEYDVSQAKKMNSGLLMPMVFLYFLHFRMKQVQPLLMQTATGVMNMVYSPLFQVYVLGRNLE----RPFKSPG 270          
BLAST of mRNA_H-elongata_contig11174.955.1 vs. uniprot
Match: K0RF32_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RF32_THAOC)

HSP 1 Score: 71.6 bits (174), Expect = 8.660e-10
Identity = 45/162 (27.78%), Postives = 79/162 (48.77%), Query Frame = 0
Query:  292 VRAARIVYTGYLISSQALCMYLRYLIWQRDDDTDVAVPPPPQLKKMVEGVGGAGTAAAAGEKAGAALSGVAEGAASPLAPMLEKLLTSRTPAKEYDMKVVQGMRRGQFWASLFMCFTHLKRGMIKPMILQVSFGVLALLDSPLFKIYVLGRQAEGDLARPFR 453
            V+ AR  + GY+++SQ   +Y+R      +D T +++  P  L  ++                        EG++  +  M  ++L S T   EYD++    M  G  +  +F+ F H K   ++P+++Q + G+  L+ SPLF++YVLGR  +    RPFR
Sbjct:  191 VKIARYCFLGYMVASQLFIVYVRMRAKAINDRTVISIDNP--LASLIPS---------------------GEGSSFLVKTMASQILNSETTVMEYDLQEASKMNSGLLFPLVFLYFLHFKMKQVQPLLMQTASGISNLIYSPLFQVYVLGRNVQ----RPFR 325          
BLAST of mRNA_H-elongata_contig11174.955.1 vs. uniprot
Match: F0YP71_AURAN (Uncharacterized protein HYP6 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YP71_AURAN)

HSP 1 Score: 67.4 bits (163), Expect = 1.900e-9
Identity = 31/81 (38.27%), Postives = 51/81 (62.96%), Query Frame = 0
Query:  372 MLEKLLTSRTPAKEYDMKVVQGMRRGQFWASLFMCFTHLKRGMIKPMILQVSFGVLALLDSPLFKIYVLGRQAEGDLARPF 452
            +++KL +  T  ++YD+ +V+  R  Q  +   MCF H+K+GM++P++ Q   GV AL+  PL + ++LGR    DL RPF
Sbjct:   22 LVDKLTSKETTVRDYDLDMVKKGRNSQLGSLALMCFLHIKKGMVQPLVAQAVMGVAALVKEPLVQAHLLGR----DLERPF 98          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11174.955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FLG4_ECTSI1.760e-7560.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KF45_9PHAE1.100e-7059.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2YS16_9STRA1.990e-1231.43Hypothetical protein (Fragment) n=2 Tax=Amphiprora... [more]
B8C4Z3_THAPS3.260e-1229.55Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S0GIX0_9STRA1.270e-1132.79Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A6U1VB83_TRICV1.710e-1131.46Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2C1H3_9STRA5.050e-1042.53Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2KRT9_9STRA6.880e-1025.84Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0RF32_THAOC8.660e-1027.78Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
F0YP71_AURAN1.900e-938.27Uncharacterized protein HYP6 n=1 Tax=Aureococcus a... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 465..485
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..540
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.714
IPR012098SRP-independent targeting protein 3PFAMPF10032Pho88coord: 380..485
e-value: 3.0E-20
score: 72.3
IPR012098SRP-independent targeting protein 3PANTHERPTHR28112FAMILY NOT NAMEDcoord: 365..482

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11174contigH-elongata_contig11174:3690..7608 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11174.955.1mRNA_H-elongata_contig11174.955.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11174 3214..7738 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11174.955.1 ID=prot_H-elongata_contig11174.955.1|Name=mRNA_H-elongata_contig11174.955.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=541bp
MPRRARSFVTLPRFILLVAGATVGSGPLGTVTTCRPSSSHQFVSFSAVKA
VTAESSPQRVKNQAWDAAIRSWNYRRRRGVVQDVHLARIIPSEHGRLPSG
AADPAVDTITRSSHKLPWMKVRGGAGTRVDIGDRILGGDDSADEQSESGS
EGAGEVVGDPDIDEDGIDGVKEDKWSRVLHFPDTSAAVVDGKAQDQAGGS
KNEDRQDSMEQAEVAKAVRIGEEGSTGTTDETAKVEGEGNTAAAGEGAEA
AGSAALKVGLGEVVPALMKSGAAFLVGTWLAKKLSPSVAGQVRAARIVYT
GYLISSQALCMYLRYLIWQRDDDTDVAVPPPPQLKKMVEGVGGAGTAAAA
GEKAGAALSGVAEGAASPLAPMLEKLLTSRTPAKEYDMKVVQGMRRGQFW
ASLFMCFTHLKRGMIKPMILQVSFGVLALLDSPLFKIYVLGRQAEGDLAR
PFRKQGFMASLSGPMEGLAAKAEEARVAAEAASEKGGAGARQGSDASGGV
SDDDSDAGAAVGANKKRDGGDDGDDYDSDDYDADDADSGD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012098SND3_fun