prot_H-elongata_contig11137.933.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig11137.933.1
Unique Nameprot_H-elongata_contig11137.933.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length70
Homology
BLAST of mRNA_H-elongata_contig11137.933.1 vs. uniprot
Match: D7G079_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G079_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 3.440e-26
Identity = 46/69 (66.67%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    1 GTKRPRFCVGHKKKGMVGLKNRPCLFPGCLTRPHYGLSRGRXXXXXXXXXXXXXHLLKESMTLEKERLA 69
            GT RPRFC  HK KGMVGLKNRPCLFPGC TRPHYGLS+GR             HLLKES+ +EKER+A
Sbjct:   84 GTSRPRFCREHKSKGMVGLKNRPCLFPGCTTRPHYGLSKGRAMYCASHKKDGMVHLLKESLNMEKERIA 152          
BLAST of mRNA_H-elongata_contig11137.933.1 vs. uniprot
Match: D7G084_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G084_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.010e-19
Identity = 43/70 (61.43%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    1 GTKRPRFCVGHKKKGMVGLKNRPCLFPGCLTRPHYGLSRGRXXXXXXXXXXXXXHLLKESMTLEKERLAR 70
            GT RPRFC  HK+K MV LKNRPCLFPGC  RPHYGLS GR             HLLKE+  LEKE L R
Sbjct:  273 GTSRPRFCSSHKEKQMVSLKNRPCLFPGCDIRPHYGLSMGRAVYCVSHKKDGMVHLLKEAKNLEKEELKR 342          
BLAST of mRNA_H-elongata_contig11137.933.1 vs. uniprot
Match: A0A6H5KF29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF29_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 2.850e-12
Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = 0
Query:    1 GTKRPRFCVGHKKKGMVGLKNRPCLFPGCLTRPHYGLSRGRXXXXXXXXXXXXXHLLKESMTLEK 65
            GT +PRFC GHK++G V LKNRPC+F    TRPHYG S   XXXXXXXXXXXXXHLLKE+ +L K
Sbjct:  270 GTGKPRFCTGHKEEGHVSLKNRPCIFXXXXTRPHYGPSMXXXXXXXXXXXXXXXHLLKEAASLGK 334          
BLAST of mRNA_H-elongata_contig11137.933.1 vs. uniprot
Match: D8LH38_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH38_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 3.870e-12
Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = 0
Query:    1 GTKRPRFCVGHKKKGMVGLKNRPCLFPGCLTRPHYGLSRGRXXXXXXXXXXXXXHLLKESMTLEK 65
            GT +PRFC GHK++G V LKNRPC+F    TRPHYG S   XXXXXXXXXXXXXHLLKE+ +L K
Sbjct:  228 GTGKPRFCTGHKQEGHVSLKNRPCIFXXXXTRPHYGPSMXXXXXXXXXXXXXXXHLLKEAESLGK 292          
BLAST of mRNA_H-elongata_contig11137.933.1 vs. uniprot
Match: A0A6H5KHQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ6_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 4.010e-10
Identity = 31/55 (56.36%), Postives = 32/55 (58.18%), Query Frame = 0
Query:   16 MVGLKNRPCLFPGCLTRPHYGLSRGRXXXXXXXXXXXXXHLLKESMTLEKERLAR 70
            MV LKNRPCLFPGC  RPHYG S GR             HLLKE+  LEK  L R
Sbjct:    1 MVSLKNRPCLFPGCDIRPHYGFSMGRAVYCVSHKKDGMVHLLKEAKNLEKGSLER 55          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11137.933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G079_ECTSI3.440e-2666.67EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7G084_ECTSI1.010e-1961.43Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KF29_9PHAE2.850e-1269.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH38_ECTSI3.870e-1269.23EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KHQ6_9PHAE4.010e-1056.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11137contigH-elongata_contig11137:146..601 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11137.933.1mRNA_H-elongata_contig11137.933.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig11137 146..601 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig11137.933.1 ID=prot_H-elongata_contig11137.933.1|Name=mRNA_H-elongata_contig11137.933.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp
GTKRPRFCVGHKKKGMVGLKNRPCLFPGCLTRPHYGLSRGRPMYCASHKK
SGMVHLLKESMTLEKERLAR
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