prot_H-elongata_contig110481.866.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig110481.866.1
Unique Nameprot_H-elongata_contig110481.866.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
BLAST of mRNA_H-elongata_contig110481.866.1 vs. uniprot
Match: UPI001C155DC1 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C155DC1)

HSP 1 Score: 65.5 bits (158), Expect = 1.210e-11
Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 0
Query:   31 FPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKVRSRLSVERLELLMRISL 82
            FPN+ KL++L   +P SSVECERGFS QN+IK+K R+ L+ + L+ LMRISL
Sbjct:   56 FPNIIKLIQLVYCIPFSSVECERGFSRQNQIKTKSRNSLTTDTLDRLMRISL 107          
BLAST of mRNA_H-elongata_contig110481.866.1 vs. uniprot
Match: C3Z810_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z810_BRAFL)

HSP 1 Score: 68.2 bits (165), Expect = 1.930e-11
Identity = 30/64 (46.88%), Postives = 48/64 (75.00%), Query Frame = 0
Query:   19 WQSVKALPGGAYFPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKVRSRLSVERLELLMRISL 82
            W+ ++ + G   FPN+ KL  +  +LP  + +CERGFS QNRIK+++R+ LSV+RL++LMRI++
Sbjct:  302 WKELERVHGSELFPNLLKLATVGRLLPMHTADCERGFSTQNRIKTRLRNALSVKRLDILMRIAI 365          
BLAST of mRNA_H-elongata_contig110481.866.1 vs. uniprot
Match: A0A8H3LT90_9GLOM (Zinc finger protein 862-like n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A8H3LT90_9GLOM)

HSP 1 Score: 65.1 bits (157), Expect = 3.110e-11
Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = 0
Query:   31 FPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKVRSRLSVERLELLMRISL 82
            FPN+ KL+++   +P SSVECERGFS QN+IK+K R+ L+   L++LMR+SL
Sbjct:   86 FPNIIKLIQIVYCIPFSSVECERGFSRQNKIKTKDRNSLATNTLDMLMRVSL 137          
BLAST of mRNA_H-elongata_contig110481.866.1 vs. uniprot
Match: UPI0011C0D78D (zinc finger protein 862-like n=1 Tax=Sparus aurata TaxID=8175 RepID=UPI0011C0D78D)

HSP 1 Score: 60.1 bits (144), Expect = 1.280e-9
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 0
Query:   31 FPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKVRSRLSVERLELLMRISL 82
            + N+ +LV + +VLP S+ +CERGFSAQNRIK+  RS L+V   E LMRISL
Sbjct:   37 YRNILELVMIMLVLPISAAQCERGFSAQNRIKTSTRSSLAVSTTEDLMRISL 88          
BLAST of mRNA_H-elongata_contig110481.866.1 vs. uniprot
Match: A0A3B1J4P0_ASTMX (TTF-type domain-containing protein n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1J4P0_ASTMX)

HSP 1 Score: 62.8 bits (151), Expect = 1.470e-9
Identity = 30/51 (58.82%), Postives = 41/51 (80.39%), Query Frame = 0
Query:   31 FPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKVRSRLSVERLELLMRIS 81
            F N++ L ++ +VLP S+ +CERGFSAQNRIKSKVR+ L+V  +E L+RIS
Sbjct:  555 FQNIFHLAEIMLVLPISAAQCERGFSAQNRIKSKVRNSLNVSTVEDLVRIS 605          
BLAST of mRNA_H-elongata_contig110481.866.1 vs. uniprot
Match: A0A8B6EWY7_MYTGA (Nuclear pore complex protein Nup188 n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6EWY7_MYTGA)

HSP 1 Score: 60.8 bits (146), Expect = 2.000e-9
Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 0
Query:   31 FPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKVRSRLSVERLELLMRISL 82
            FPN   L+++  +LP SSVECERGFS QN IK+K+R  L ++ L+ LMRISL
Sbjct:   99 FPNAISLMEISRILPVSSVECERGFSRQNIIKTKLRCSLGIDALDQLMRISL 150          
BLAST of mRNA_H-elongata_contig110481.866.1 vs. uniprot
Match: A0A015J8B3_RHIIW (Uncharacterized protein n=13 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015J8B3_RHIIW)

HSP 1 Score: 62.0 bits (149), Expect = 2.750e-9
Identity = 29/52 (55.77%), Postives = 40/52 (76.92%), Query Frame = 0
Query:   31 FPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKVRSRLSVERLELLMRISL 82
            FPN+ KL+++   +P SSVECERGFS QN+IK+K R+ L+   L++LM ISL
Sbjct:  544 FPNIIKLIQIAYCIPFSSVECERGFSRQNKIKTKDRNSLATNTLDMLMCISL 595          
BLAST of mRNA_H-elongata_contig110481.866.1 vs. uniprot
Match: UPI001C19C353 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C19C353)

HSP 1 Score: 62.0 bits (149), Expect = 2.810e-9
Identity = 29/52 (55.77%), Postives = 40/52 (76.92%), Query Frame = 0
Query:   31 FPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKVRSRLSVERLELLMRISL 82
            FPN+ KL+++   +P SSVECERGFS QN+IK+K R+ L+   L++LM ISL
Sbjct:  614 FPNIIKLIQIAYCIPFSSVECERGFSRQNKIKTKDRNSLATNTLDMLMCISL 665          
BLAST of mRNA_H-elongata_contig110481.866.1 vs. uniprot
Match: A0A2Z6RJ54_9GLOM (Zinc finger protein 862-like n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6RJ54_9GLOM)

HSP 1 Score: 61.2 bits (147), Expect = 2.900e-9
Identity = 30/52 (57.69%), Postives = 40/52 (76.92%), Query Frame = 0
Query:   31 FPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKVRSRLSVERLELLMRISL 82
            F N+ KL++L   +P SSVECERGFS QN+IK+K R+ L+ + L+ LMRISL
Sbjct:  171 FLNIIKLIQLIYCIPFSSVECERGFSRQNQIKTKNRNSLTTDTLDRLMRISL 222          
BLAST of mRNA_H-elongata_contig110481.866.1 vs. uniprot
Match: UPI0011C0E6B2 (zinc finger protein 862-like n=1 Tax=Sparus aurata TaxID=8175 RepID=UPI0011C0E6B2)

HSP 1 Score: 61.2 bits (147), Expect = 4.990e-9
Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 0
Query:   22 VKALPGGAYFPNVYKLVKLYIVLPHSSVECERGFSAQNRIKSKVRSRLSVERLELLMRISL 82
            V  LP G+ + N+  LV + +VLP SS  CERGFSAQ RIKS VR  L V+ +E L+RIS+
Sbjct:  335 VTKLPFGSDYKNIPHLVHIMLVLPISSAVCERGFSAQKRIKSDVRGSLHVDTVEDLIRISM 395          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110481.866.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C155DC11.210e-1159.62Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
C3Z810_BRAFL1.930e-1146.88Uncharacterized protein n=1 Tax=Branchiostoma flor... [more]
A0A8H3LT90_9GLOM3.110e-1155.77Zinc finger protein 862-like n=1 Tax=Rhizophagus c... [more]
UPI0011C0D78D1.280e-957.69zinc finger protein 862-like n=1 Tax=Sparus aurata... [more]
A0A3B1J4P0_ASTMX1.470e-958.82TTF-type domain-containing protein n=1 Tax=Astyana... [more]
A0A8B6EWY7_MYTGA2.000e-957.69Nuclear pore complex protein Nup188 n=1 Tax=Mytilu... [more]
A0A015J8B3_RHIIW2.750e-955.77Uncharacterized protein n=13 Tax=Rhizophagus irreg... [more]
UPI001C19C3532.810e-955.77Hypothetical protein n=1 Tax=Rhizophagus irregular... [more]
A0A2Z6RJ54_9GLOM2.900e-957.69Zinc finger protein 862-like n=1 Tax=Rhizophagus c... [more]
UPI0011C0E6B24.990e-954.10zinc finger protein 862-like n=1 Tax=Sparus aurata... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 28..79
e-value: 1.1E-7
score: 31.5
NoneNo IPR availablePANTHERPTHR46880:SF5E3 SUMO-PROTEIN LIGASE KIAA1586coord: 10..82
NoneNo IPR availablePANTHERPTHR46880FAMILY NOT NAMEDcoord: 10..82
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 18..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig110481contigH-elongata_contig110481:809..1066 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig110481.866.1mRNA_H-elongata_contig110481.866.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig110481 809..1068 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig110481.866.1 ID=prot_H-elongata_contig110481.866.1|Name=mRNA_H-elongata_contig110481.866.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
EKVRKRRSEVSVRIRVHFWQSVKALPGGAYFPNVYKLVKLYIVLPHSSVE
CERGFSAQNRIKSKVRSRLSVERLELLMRISLAHRH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf