mRNA_H-elongata_contig110171.832.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig110171.832.1 vs. uniprot
Match: D8LTW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTW1_ECTSI) HSP 1 Score: 218 bits (554), Expect = 2.560e-66 Identity = 112/171 (65.50%), Postives = 133/171 (77.78%), Query Frame = 1
Query: 1 DFDSITPGVDAESPAPRVPKSEAARAILSEALSSHFLFSQLTSEDLEACVDVMGAIRTAANDDIVVQGERGTRFFVVAEGAAEAFVDGEKVASYSTGGSFGELALMYNCKRAATVRSVTASSLWTMDLSIFRKYLATTASSQMLSRCEFLRKIPLLAELTNEQAREIGQTI 513
+F S G DAE P+P VPKS+ ARA LS AL HFLF+QLT DL ACVDVMG + +A DIVVQGERG+RFFV+ G+AEA+V+GE+V Y GGSFGELALMYNC+RAATVR+ + S LWTMDLS FR+ LATTASSQ+LSRCEFLRK+P LAEL NEQ ++ +
Sbjct: 147 EFASFGQGGDAEIPSPAVPKSDEARAALSNALRGHFLFAQLTPTDLSACVDVMGLLEMSAGQDIVVQGERGSRFFVMESGSAEAYVNGERVCGYGPGGSFGELALMYNCERAATVRATSDSRLWTMDLSTFRRSLATTASSQILSRCEFLRKVPFLAELNNEQVNKLADAL 317
BLAST of mRNA_H-elongata_contig110171.832.1 vs. uniprot
Match: A0A6H5JZB9_9PHAE (cGMP-dependent protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZB9_9PHAE) HSP 1 Score: 218 bits (555), Expect = 5.930e-63 Identity = 112/171 (65.50%), Postives = 133/171 (77.78%), Query Frame = 1
Query: 1 DFDSITPGVDAESPAPRVPKSEAARAILSEALSSHFLFSQLTSEDLEACVDVMGAIRTAANDDIVVQGERGTRFFVVAEGAAEAFVDGEKVASYSTGGSFGELALMYNCKRAATVRSVTASSLWTMDLSIFRKYLATTASSQMLSRCEFLRKIPLLAELTNEQAREIGQTI 513
+F S G DAE P+P VPKS+ ARA LS AL HFLF+QL DL ACVDVMG + +A DIVVQGERG+RFFV+ G+AEA+V+GE+V Y GGSFGELALMYNC+RAATVR+ + S LWTMDLS FR+ LATTASSQ+LSRCEFLRK+P LAELTNEQ ++ +
Sbjct: 226 EFASFGQGGDAEIPSPAVPKSDEARAALSNALREHFLFAQLAPTDLSACVDVMGLLEVSAGQDIVVQGERGSRFFVMESGSAEAYVNGERVCGYGPGGSFGELALMYNCERAATVRATSDSRLWTMDLSTFRRTLATTASSQILSRCEFLRKVPFLAELTNEQVNKLADAL 396
BLAST of mRNA_H-elongata_contig110171.832.1 vs. uniprot
Match: A0A835YV03_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV03_9STRA) HSP 1 Score: 153 bits (387), Expect = 3.850e-40 Identity = 77/146 (52.74%), Postives = 102/146 (69.86%), Query Frame = 1
Query: 76 AILSEALSSHFLFSQLTSEDLEACVDVMGAIRTAANDDIVVQGERGTRFFVVAEGAAEAFVDGEKVASYSTGGSFGELALMYNCKRAATVRSVTASSLWTMDLSIFRKYLATTASSQMLSRCEFLRKIPLLAELTNEQAREIGQTI 513
A+L AL HFLFSQL DL ACV+ M AA ++I+ QG+RG+ F+V+ +GAA VDG +V Y SFGELALMYNC+RAATV++ +A + WTM L FR+ LATTAS Q++ RC+FLR++ LLA LTNEQ ++ +
Sbjct: 31 ALLFAALREHFLFSQLAESDLRACVERMVRHDYAAGEEIIRQGDRGSEFYVLEQGAAMILVDGSEVGEYGPSSSFGELALMYNCERAATVKATSACTAWTMQLQAFRRLLATTASGQVMRRCDFLRRVELLAPLTNEQVTKLADAL 176
BLAST of mRNA_H-elongata_contig110171.832.1 vs. uniprot
Match: A0A482RZV9_9ARCH (Cyclic nucleotide-binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZV9_9ARCH) HSP 1 Score: 135 bits (339), Expect = 1.060e-35 Identity = 71/149 (47.65%), Postives = 97/149 (65.10%), Query Frame = 1
Query: 58 KSEAARAILSEALSSHFLFSQLTSEDLEACVDVMGAIRTAANDDIVVQGERGTRFFVVAEGAAEAFVDGEKVASYSTGGSFGELALMYNCKRAATVRSVTASSLWTMDLSIFRKYLATTASSQMLSRCEFLRKIPLLAELTNEQAREIG 504
K EAA++ L +A+ H+LF L ED+ +D M +A++ ++ QGE G FF + G+A AFVD ++V YS GG FGELAL+YN RAA+V + A LWT+DL FR LATT+SS+M+ RCEFL+K L LTNEQ ++
Sbjct: 107 KPEAAKSFLRQAIGQHYLFEALGEEDINRIIDCMRPTFASADEVVIRQGELGDLFFCLETGSATAFVDNKEVMKYSAGGCFGELALIYNSPRAASVVATAACKLWTLDLRTFRYILATTSSSKMVVRCEFLKKCSFLDPLTNEQISKLA 255
BLAST of mRNA_H-elongata_contig110171.832.1 vs. uniprot
Match: K3WEA6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEA6_GLOUD) HSP 1 Score: 137 bits (345), Expect = 1.140e-35 Identity = 67/169 (39.64%), Postives = 109/169 (64.50%), Query Frame = 1
Query: 7 DSITPGVDAESPAPRVPKSEAARAILSEALSSHFLFSQLTSEDLEACVDVMGAIRTAANDDIVVQGERGTRFFVVAEGAAEAFVDGEKVASYSTGGSFGELALMYNCKRAATVRSVTASSLWTMDLSIFRKYLATTASSQMLSRCEFLRKIPLLAELTNEQAREIGQTI 513
+++ PG + + RVPK+ RA++++AL SH+LFS L +++ +DVM A ++++ QG G F+V+ G+ + VD E V Y+ G +FGELAL+YNC RAAT+R++T LWT++ + FRK +ATTAS+ L+R FL+ + LL L+N Q +++ +
Sbjct: 61 EAVEPGDLSSTTHVRVPKNNQTRAMITKALKSHYLFSSLDQGEIDEMIDVMAMATIQAGENVISQGTPGNCFYVLESGSCDIIVDNELVGKYNNGDAFGELALLYNCPRAATIRAITGCILWTVERTTFRKIMATTASATQLARVNFLKNVELLQRLSNNQLQKVAAAL 229
BLAST of mRNA_H-elongata_contig110171.832.1 vs. uniprot
Match: A0A2D4C4L2_PYTIN (cGMP-dependent protein kinase n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4C4L2_PYTIN) HSP 1 Score: 139 bits (350), Expect = 4.700e-35 Identity = 64/155 (41.29%), Postives = 104/155 (67.10%), Query Frame = 1
Query: 49 RVPKSEAARAILSEALSSHFLFSQLTSEDLEACVDVMGAIRTAANDDIVVQGERGTRFFVVAEGAAEAFVDGEKVASYSTGGSFGELALMYNCKRAATVRSVTASSLWTMDLSIFRKYLATTASSQMLSRCEFLRKIPLLAELTNEQAREIGQTI 513
RVPK+ RA++++AL SH+LFS L +++ +DVM + A ++++ QG G F+V+ G+ + VDG+ V Y+ G +FGELAL+YNC RAAT+R+ T LW+++ ++FRK +ATTAS+ L+R FL+ + LL L+N Q +++ +
Sbjct: 83 RVPKNNQTRAMITKALKSHYLFSSLEQSEVDEMIDVMAMVTVQAGENVIAQGTAGNCFYVLESGSCDIVVDGQLVGKYANGDAFGELALLYNCPRAATIRATTGCILWSVERTMFRKIMATTASATQLARVNFLKNVELLQRLSNNQLQKVAAAL 237
BLAST of mRNA_H-elongata_contig110171.832.1 vs. uniprot
Match: H3GFR0_PHYRM (cGMP-dependent protein kinase n=24 Tax=Peronosporaceae TaxID=4777 RepID=H3GFR0_PHYRM) HSP 1 Score: 138 bits (347), Expect = 1.210e-34 Identity = 68/169 (40.24%), Postives = 108/169 (63.91%), Query Frame = 1
Query: 7 DSITPGVDAESPAPRVPKSEAARAILSEALSSHFLFSQLTSEDLEACVDVMGAIRTAANDDIVVQGERGTRFFVVAEGAAEAFVDGEKVASYSTGGSFGELALMYNCKRAATVRSVTASSLWTMDLSIFRKYLATTASSQMLSRCEFLRKIPLLAELTNEQAREIGQTI 513
D++ PG S RVPK+ RA++++AL SH+LFS L +++ +DVM + A + ++ QG G F+V+ G + +DG+ V +Y+ G +FGELAL+YNC RAAT+R+ T LWT++ + FRK +ATTAS+ L+R FL+ + LL L+N Q +++ +
Sbjct: 59 DAVEPGDLDSSQHVRVPKNNQTRAMITKALKSHYLFSSLDQGEIDEMIDVMAMVTIQAGEAVIAQGTSGKCFYVLESGNCDIVIDGKLVGTYTNGDAFGELALLYNCPRAATIRATTGCILWTVERTTFRKIMATTASATQLARVNFLKNVELLQRLSNNQLQKVAAAL 227
BLAST of mRNA_H-elongata_contig110171.832.1 vs. uniprot
Match: A0A5D6XVB7_9STRA (cGMP-dependent protein kinase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVB7_9STRA) HSP 1 Score: 136 bits (343), Expect = 3.970e-34 Identity = 64/155 (41.29%), Postives = 101/155 (65.16%), Query Frame = 1
Query: 49 RVPKSEAARAILSEALSSHFLFSQLTSEDLEACVDVMGAIRTAANDDIVVQGERGTRFFVVAEGAAEAFVDGEKVASYSTGGSFGELALMYNCKRAATVRSVTASSLWTMDLSIFRKYLATTASSQMLSRCEFLRKIPLLAELTNEQAREIGQTI 513
RVPK+ RA+++ AL SH+LFS L +++ +DVM + D+++ QG G F+V+ G+ + VD E V YS G +FGELAL+YNC RAAT+R+ + LWT++ ++FR+ +ATTAS+ L+R FL+ + LL L+N Q +++ +
Sbjct: 70 RVPKNNQTRAMITRALKSHYLFSSLDQGEIDEMIDVMAMVTVQCGDNVISQGAAGNCFYVLESGSCDIVVDNELVGKYSNGDAFGELALLYNCPRAATIRATSGCILWTVERTMFRRIMATTASATQLARVNFLKNVELLQRLSNNQLQKVAAAL 224
BLAST of mRNA_H-elongata_contig110171.832.1 vs. uniprot
Match: A0A1V9ZDV3_9STRA (cGMP-dependent protein kinase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZDV3_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.440e-33 Identity = 67/151 (44.37%), Postives = 99/151 (65.56%), Query Frame = 1
Query: 52 VPKSEAARAILSEALSSHFLFSQLTSEDLEACVDVMGAIRTAANDDIVVQGERGTRFFVVAEGAAEAFVDGEKVASYSTGGSFGELALMYNCKRAATVRSVTASSLWTMDLSIFRKYLATTASSQMLSRCEFLRKIPLLAELTNEQAREIG 504
+PKS + ++ +AL H+LFS L ++ ++ M + AANDDI+VQG G F+++ GA V+ E V Y +G +FGELAL+YNC RAAT+R++ SLWT+D + FRK LATTAS+ LSR +FL+ + LL L+N Q +++
Sbjct: 70 IPKSNETKLVIMKALKGHYLFSSLDDGEILDILNAMSNVVHAANDDIIVQGTPGNVFYILETGACAILVNNEVVGQYGSGDAFGELALLYNCPRAATIRALAPCSLWTVDRTSFRKILATTASTMQLSRVQFLQNVDLLQRLSNNQLQKVA 220
BLAST of mRNA_H-elongata_contig110171.832.1 vs. uniprot
Match: A0A0P1AY41_PLAHL (cGMP-dependent protein kinase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AY41_PLAHL) HSP 1 Score: 132 bits (332), Expect = 1.390e-32 Identity = 64/155 (41.29%), Postives = 101/155 (65.16%), Query Frame = 1
Query: 49 RVPKSEAARAILSEALSSHFLFSQLTSEDLEACVDVMGAIRTAANDDIVVQGERGTRFFVVAEGAAEAFVDGEKVASYSTGGSFGELALMYNCKRAATVRSVTASSLWTMDLSIFRKYLATTASSQMLSRCEFLRKIPLLAELTNEQAREIGQTI 513
RVPK+ RA++++AL SH+LF L +++ +DVM + A++ I+ QG G F+V+ G + VD + V +Y+ G +FGELAL+YNC RAAT+R+ T LWT++ + FRK +ATTAS+ L+R FL+ + LL L+N Q +++ +
Sbjct: 73 RVPKNNQTRAMITKALKSHYLFGSLDQGEIDEMIDVMAMVTIQASEAIITQGMSGKCFYVLESGNCDIEVDSKLVGTYTNGDAFGELALLYNCPRAATIRATTGCILWTVERTTFRKIMATTASATQLARVNFLKNVELLQRLSNNQMQKVAAAL 227 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig110171.832.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig110171.832.1 >prot_H-elongata_contig110171.832.1 ID=prot_H-elongata_contig110171.832.1|Name=mRNA_H-elongata_contig110171.832.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=171bp DFDSITPGVDAESPAPRVPKSEAARAILSEALSSHFLFSQLTSEDLEACVback to top mRNA from alignment at H-elongata_contig110171:219..1811+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig110171.832.1 ID=mRNA_H-elongata_contig110171.832.1|Name=mRNA_H-elongata_contig110171.832.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1593bp|location=Sequence derived from alignment at H-elongata_contig110171:219..1811+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig110171:219..1811+ >mRNA_H-elongata_contig110171.832.1 ID=mRNA_H-elongata_contig110171.832.1|Name=mRNA_H-elongata_contig110171.832.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1026bp|location=Sequence derived from alignment at H-elongata_contig110171:219..1811+ (Himanthalia elongata Himel1 dioecious)back to top |