prot_H-elongata_contig109957.806.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig109957.806.1
Unique Nameprot_H-elongata_contig109957.806.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length180
Homology
BLAST of mRNA_H-elongata_contig109957.806.1 vs. uniprot
Match: A0A6H5JEE3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEE3_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 3.310e-69
Identity = 108/181 (59.67%), Postives = 133/181 (73.48%), Query Frame = 0
Query:    1 GKTVVPDEFCDPLTKTTIDGEEFDLNPCGLIANSMFNDIITLSSENVTMFEEDISWESDRNKRFKQPPGFASVVVGKGNCPYLNSSCEDCFSEESEDNAPYDGCENYTD-ANNTNFKYWYPDNDKTQYLYETYPKIVSPIDGVLNEHFIVWMRTAGLPTFRKVYGRIEQELSPPDTLTFNI 180
            G+ V PDE C+PL +TT+DGE  DLNPCGLIANSMFNDII L++E VTM E+DISW+SDR  RFKQPPGF             N+SC DC        + Y  C ++TD +  T +K+WYPD++ TQ+LYETYP +VSPI+GVLNEHFIVWMRTAGLP FRK+YGRI++++  P  LTFNI
Sbjct:  147 GEAVEPDENCEPLERTTVDGEILDLNPCGLIANSMFNDIIELTTEGVTMSEKDISWKSDRETRFKQPPGFTFAECS------ANTSCSDCLG-----GSKYSSCGDHTDESTGTEYKFWYPDDETTQFLYETYPGVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGRIDEQIEAPQVLTFNI 316          
BLAST of mRNA_H-elongata_contig109957.806.1 vs. uniprot
Match: A0A6S9FRN7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FRN7_HETAK)

HSP 1 Score: 181 bits (460), Expect = 6.750e-53
Identity = 93/185 (50.27%), Postives = 125/185 (67.57%), Query Frame = 0
Query:    1 GKTVVPD-EFCDPLTKTTIDGEEFDLNPCGLIANSMFNDIITLSSEN---VTMFEEDISWESDRNKRFKQPPGFASVVVGK-GNCPYLNSSCEDCFSEESEDNAPYDGCENYTDANNTNFKYWYPDNDKTQYLYETYPKIVSPIDGVLNEHFIVWMRTAGLPTFRKVYGRIEQELSPPDTLTFNI 180
            G T+  D ++C PLT     G + DLNPCGL+ANS+FND+I L +     V + E  I+W+SDR  +F QP GFA V +G    C  L  +CE  F     D++ YD CE YTDA NT + Y+YP+ND+ QYLYET+P++++PI+GV NEHFIVWMRTA LP FRK+YG I+ +L+  D +TF +
Sbjct:  126 GSTLHADTDYCSPLTSN---GSQ-DLNPCGLVANSLFNDVIALEASTNAAVALDETGITWDSDRATKFAQPDGFAYVTLGDDAGCTELPCTCETAF-----DSSDYDDCEFYTDAENTTYAYYYPENDEIQYLYETFPEVINPIEGVTNEHFIVWMRTAALPKFRKLYGIIDTDLTEGDEITFKV 301          
BLAST of mRNA_H-elongata_contig109957.806.1 vs. uniprot
Match: D8LLD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD4_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 3.570e-47
Identity = 86/181 (47.51%), Postives = 109/181 (60.22%), Query Frame = 0
Query:    9 FCDPLTKTTIDGEEFDLNPCGLIANSMFNDIITLSS-----ENVT----MFEEDISWESDRNKRFKQPPGFASVVVGKGNCPYLNSSCEDCFSEESEDNAPYDGCENYTDANNTNFKYWYPDNDKTQYLYETYPKIVSPIDGVLNEHFIVWMRTAGLPTFRKVYGRIEQELSPPDTLTFNI 180
             C PL       +  DLNPCGL+ANSMFND+I + S     E+++    M E  ISW +DR+  F QP GF             + SCEDC        A Y  C ++TD   T++KYWYPD   TQYLYETYP ++SP+DGV +EHF+VWMRTA L TFR +YGRIE +L  P  +TFN+
Sbjct:  112 ICSPLESI----DTLDLNPCGLVANSMFNDVIVVDSAPEPYESLSPYEYMDEGGISWVTDRDGDFSQPDGFVRAECAP------SVSCEDCLGS-----AAYSDCGSFTDRTGTSYKYWYPDEASTQYLYETYPNVISPVDGVTDEHFVVWMRTAALSTFRNLYGRIEHDLVAPAEITFNV 277          
BLAST of mRNA_H-elongata_contig109957.806.1 vs. uniprot
Match: A0A836CGC5_9STRA (CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC5_9STRA)

HSP 1 Score: 159 bits (401), Expect = 3.830e-44
Identity = 81/171 (47.37%), Postives = 108/171 (63.16%), Query Frame = 0
Query:   10 CDPLTKTTIDGEEFDLNPCGLIANSMFNDIITLSSENVTMFEEDISWESDRNKRFKQPPGFASVVVGKGNCPYLNSSCEDCFSEESEDNAPYDGCENYTDANNTNFKYWYPDNDKTQYLYETYPKIVSPIDGVLNEHFIVWMRTAGLPTFRKVYGRIEQELSPPDTLTFNI 180
            C PL +      +  L+PCGLIAN++FNDIIT++S+ V M E  I+W +D +K F+QP GF +              C  C       +  YDGC   TDA+ T++ YWYPD DK QYLYET+P ++SP++GV NEHF+VWMR AGL  FRK YG+I Q L+   T+TFN+
Sbjct:  141 CTPLERNG----DLTLSPCGLIANTLFNDIITVTSDQV-MEETGIAWNTDLDK-FEQPHGFVTTACA------ATDECASCLQAAYNSDDDYDGCGIATDASGTSYAYWYPDEDKIQYLYETFPDVISPLEGVKNEHFMVWMRVAGLRQFRKPYGKISQSLAKGTTVTFNV 299          
BLAST of mRNA_H-elongata_contig109957.806.1 vs. uniprot
Match: D8LE53_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE53_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 1.610e-39
Identity = 84/185 (45.41%), Postives = 114/185 (61.62%), Query Frame = 0
Query:    1 GKTVVPD-EFCDPLTKTTIDGEEFDLNPCGLIANSMFNDIITLSSENVTMFEEDISWESDRNKRFKQPPGFASVVVGKGNCPYLNSSCEDCFSE----ESEDNAPYDGCENYTDANNTNFKYWYPDNDKTQYLYETYPKIVSPIDGVLNEHFIVWMRTAGLPTFRKVYGRIEQELSPPDTLTFNI 180
            G T   D + CDPL    I      L+PCGLIAN++FNDI T+SS   TM E DI+W+SD   +F QP GF +              C  C ++    +S+    ++GC   TD+      Y+YPD D TQYLYET+P+++SP+DGV NEHFIVWMR +GL +FRK+YGRI+  L+  DTL+F++
Sbjct:  133 GSTSTSDIDDCDPL----IYNGTLVLHPCGLIANTLFNDIFTVSSGQ-TMEETDIAWDSDVADKFVQPDGFVTTACED------EDGCVACLTDAGLTDSDGGTTFEGC-GVTDST----AYYYPDEDTTQYLYETFPEVISPLDGVKNEHFIVWMRVSGLSSFRKLYGRIDDGLNEGDTLSFDV 301          
BLAST of mRNA_H-elongata_contig109957.806.1 vs. uniprot
Match: K0TBR7_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBR7_THAOC)

HSP 1 Score: 146 bits (369), Expect = 8.550e-39
Identity = 77/165 (46.67%), Postives = 102/165 (61.82%), Query Frame = 0
Query:   25 LNPCGLIANSMFNDIITLSS---------ENVTMFEEDISWESDRNKRFKQPPGFASVVVGKGNCPYLNSSCEDCFSEESEDNAPYDGCENYTDANNTNFKYWYPDNDKTQYLYETYPKIVSPIDGVLNEHFIVWMRTAGLPTFRKVYGRIEQELSPPDTLTFNI 180
            +NPCGLIAN++FND+ITL S         ++  + E  I+W+SD   +F+QP GF         CP     C DC    ++    +   E Y D +   F+Y+YPD++ TQYLYETYP +VSPIDGV+NEHF+VWMR A LP FRK+YG IE+ +    TLTF I
Sbjct:  213 INPCGLIANTLFNDVITLESIVTPDGTVLDDAPLVETGIAWQSDLEWKFRQPEGFRYEE-----CPGGEDEC-DCSQLGADGERLWSCTEPYRDEDGLYFRYYYPDDETTQYLYETYPMVVSPIDGVMNEHFVVWMRVAALPQFRKLYGYIERTIPAGSTLTFAI 371          
BLAST of mRNA_H-elongata_contig109957.806.1 vs. uniprot
Match: A0A835Z5R6_9STRA (CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5R6_9STRA)

HSP 1 Score: 140 bits (354), Expect = 3.690e-37
Identity = 83/189 (43.92%), Postives = 109/189 (57.67%), Query Frame = 0
Query:    1 GKTVVPDEFCDPLTKTTIDGEEFDLNPCGLIANSMFNDIITLSSENVT---------MFEEDISWESDRNKRFKQPPGFASVVVGKGNCPYLNSSCEDCFSEESEDNAPYDGCENYTDANNTNFKYWYPDNDKTQYLYETYPKIVSPIDGVLNEHFIVWMRTAGLPTFRKVYGRIEQELSPPDTLTFNI 180
            G  V  D  C PL K    G+++ LNPCGLIANSMFND+ T+S+             M E  I+W +D + RF QP GF     G        +SC  C        A Y  C   TDA+   + Y+YP++  TQYL+ETYPK+VSP++GV NEHF+VWMRTA LPTFRK+YG I+ ++     + F+I
Sbjct:  132 GSNVQGDSLCSPLKKN---GDQW-LNPCGLIANSMFNDVFTVSAAPAPFDATAPAAYMRETGIAWPNDID-RFSQPDGFVKKSCGG------TASCASCLG------AGYTDCGVATDADGKRWAYYYPNDATTQYLHETYPKVVSPLEGVTNEHFMVWMRTAALPTFRKLYGIIDSDIPGGWDVQFDI 303          
BLAST of mRNA_H-elongata_contig109957.806.1 vs. uniprot
Match: A0A6U4G101_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4G101_9STRA)

HSP 1 Score: 142 bits (357), Expect = 4.070e-37
Identity = 74/159 (46.54%), Postives = 102/159 (64.15%), Query Frame = 0
Query:   25 LNPCGLIANSMFNDIITLSSENVTMFEEDISWESDRNKRFKQPPGFASV-VVGKGNCPYLNSSCEDCFSEESEDNAPYDGCENY--TDANNTNFKYWYPDNDKTQYLYETYPKIVSPIDGVLNEHFIVWMRTAGLPTFRKVYGRIEQELSPPDTLTFNI 180
            L+PCGLIANS+FND+ITL +  + M E+DI+WESD++ +F QP  F      G G     +++C+   S   +   P D   N   T      + Y+Y + D   YLYE +P++++P++GV NEHFIVWMRTAGLP FRK+YGRIEQ++S    LTF I
Sbjct:  207 LSPCGLIANSLFNDVITLQNTEIDMAEDDIAWESDKDAKFDQPDDFVKERYTGTGTA--TDAACQTQLSSNGD--VPSDQLSNVGSTTFEGEQWCYFYNNEDDITYLYEVFPEVINPVEGVNNEHFIVWMRTAGLPQFRKLYGRIEQDISEGTQLTFQI 361          
BLAST of mRNA_H-elongata_contig109957.806.1 vs. uniprot
Match: A0A7S3H619_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H619_9STRA)

HSP 1 Score: 139 bits (349), Expect = 6.930e-37
Identity = 84/176 (47.73%), Postives = 104/176 (59.09%), Query Frame = 0
Query:   10 CDPLTKTTIDGEEFDLNPCGLIANSMFNDIITLSSENVT-----MFEEDISWESDRNKRFKQPPGFASVVVGKGNCPYLNSSCEDCFSEESEDNAPYDGCENYTDANNTNFKYWYPDNDKTQYLYETYPKIVSPIDGVLNEHFIVWMRTAGLPTFRKVYGRIEQELSPPDTLTFNI 180
            C+PL K    G    LNPCGLIANS F DII L S + T     M E  IS +SDR+  FKQ  GFA V V        + SC     +         GC+ YTD N  ++ ++YP++D  QYLYETYP  +SPI GV +EHFIVWM+T+ LPTFRK+YGRIE   +  D L F+I
Sbjct:   96 CNPLYKN---GSML-LNPCGLIANSFFTDIIALDSASSTPGGLNMSETSISLKSDRDDIFKQVDGFAYVAVSD-----TSVSCVSVGLKA--------GCKAYTDLNGQDYLFYYPNDDTVQYLYETYPDQISPIVGVTDEHFIVWMKTSSLPTFRKLYGRIEGNFNKGDRLVFDI 254          
BLAST of mRNA_H-elongata_contig109957.806.1 vs. uniprot
Match: A0A7R9U6E4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6E4_9STRA)

HSP 1 Score: 137 bits (346), Expect = 8.240e-36
Identity = 71/158 (44.94%), Postives = 104/158 (65.82%), Query Frame = 0
Query:   25 LNPCGLIANSMFNDIITLSSENVTMFEEDISWESDRNKRFKQPPGFASVVVGKGNCPYLNSSCEDCFSEESEDNAPYDGCEN--YTDANNTNFKYWYPDNDKTQYLYETYPKIVSPIDGVLNEHFIVWMRTAGLPTFRKVYGRIEQELSPPDTLTFNI 180
            L+PCGLIANS+FND+ITL++ +V M E+DISW+SDR+ +F QP  F S  +   +      +C     E+ E + P     +  +T     ++ ++Y + D+  YLYE YP++++P++GV NEHFIVWMRTAGLP FRK+YGRIE+++     L F I
Sbjct:  168 LSPCGLIANSLFNDVITLTNSDVEMREDDISWQSDRDAKFDQPDDFISERLRNTSASDKAQACI----EQLESDVPDSQVSSIGFTVFEGEDWCFFYRNEDQITYLYEIYPEVINPVEGVNNEHFIVWMRTAGLPQFRKLYGRIEEDIPKGTQLRFQI 321          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109957.806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEE3_9PHAE3.310e-6959.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6S9FRN7_HETAK6.750e-5350.27Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LLD4_ECTSI3.570e-4747.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CGC5_9STRA3.830e-4447.37CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=30... [more]
D8LE53_ECTSI1.610e-3945.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
K0TBR7_THAOC8.550e-3946.67Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A835Z5R6_9STRA3.690e-3743.92CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=30... [more]
A0A6U4G101_9STRA4.070e-3746.54Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S3H619_9STRA6.930e-3747.73Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A7R9U6E4_9STRA8.240e-3644.94Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005045CDC50/LEM3 familyPFAMPF03381CDC50coord: 7..180
e-value: 6.9E-32
score: 111.1
IPR005045CDC50/LEM3 familyPANTHERPTHR10926CELL CYCLE CONTROL PROTEIN 50coord: 8..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109957contigH-elongata_contig109957:376..2008 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109957.806.1mRNA_H-elongata_contig109957.806.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig109957 376..2008 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig109957.806.1 ID=prot_H-elongata_contig109957.806.1|Name=mRNA_H-elongata_contig109957.806.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp
GKTVVPDEFCDPLTKTTIDGEEFDLNPCGLIANSMFNDIITLSSENVTMF
EEDISWESDRNKRFKQPPGFASVVVGKGNCPYLNSSCEDCFSEESEDNAP
YDGCENYTDANNTNFKYWYPDNDKTQYLYETYPKIVSPIDGVLNEHFIVW
MRTAGLPTFRKVYGRIEQELSPPDTLTFNI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005045CDC50/LEM3_fam