mRNA_H-elongata_contig109939.805.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig109939.805.1 vs. uniprot
Match: A0A6H5KMD5_9PHAE (Aldo_ket_red domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMD5_9PHAE) HSP 1 Score: 119 bits (299), Expect = 1.340e-30 Identity = 57/72 (79.17%), Postives = 63/72 (87.50%), Query Frame = 1
Query: 1 LATRKPETSGMLRVCEELDVRVLAYSPLAQGLLTGKYSSDFLPSGPRARLFKSQLPKIEPLAAKLKEIGAPR 216
LA RKPETSGMLR+CE+LDVRVLAYSPLAQGLLTGKYS DF+PSGPR R+FK +LP + PL KLKEIG PR
Sbjct: 274 LANRKPETSGMLRLCEDLDVRVLAYSPLAQGLLTGKYSKDFVPSGPRGRVFKKKLPAVAPLVDKLKEIGTPR 345
BLAST of mRNA_H-elongata_contig109939.805.1 vs. uniprot
Match: A0A836CJF6_9STRA (Aldo/keto reductase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJF6_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 2.660e-20 Identity = 46/72 (63.89%), Postives = 53/72 (73.61%), Query Frame = 1
Query: 1 LATRKPETSGMLRVCEELDVRVLAYSPLAQGLLTGKYSSDFLPSGPRARLFKSQLPKIEPLAAKLKEIGAPR 216
L +RKPE SG+L C L V+VLAYSPLAQGLLTGKYS LPSGPR R++KS +PKI PL A L +I R
Sbjct: 190 LLSRKPEMSGLLDKCSSLGVKVLAYSPLAQGLLTGKYSEANLPSGPRERMYKSMMPKITPLIATLTQIAQER 261
BLAST of mRNA_H-elongata_contig109939.805.1 vs. uniprot
Match: L1IYR3_GUITC (Aldo_ket_red domain-containing protein n=3 Tax=Geminigeraceae TaxID=589343 RepID=L1IYR3_GUITC) HSP 1 Score: 85.1 bits (209), Expect = 5.850e-18 Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = 1
Query: 1 LATRKPETSGMLRVCEELDVRVLAYSPLAQGLLTGKYSSDFLPSGPRARLFKSQLPKIEPLAAKLKEIG 207
L R PE +G+ C+EL V++LAYSPLAQG LTG+YSS LPSGPR R+F+ ++ K++PL + LK IG
Sbjct: 195 LLHRTPEMNGVKEACDELGVKILAYSPLAQGCLTGRYSSTNLPSGPRGRIFEQRMDKVDPLLSALKRIG 263
BLAST of mRNA_H-elongata_contig109939.805.1 vs. uniprot
Match: A0A1F8RSB6_9CHLR (2,5-didehydrogluconate reductase n=1 Tax=Chloroflexi bacterium RBG_16_68_14 TaxID=1797660 RepID=A0A1F8RSB6_9CHLR) HSP 1 Score: 81.6 bits (200), Expect = 7.250e-17 Identity = 42/72 (58.33%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 1 LATRKPETSGMLRVCEELDVRVLAYSPLAQGLLTGKYSSDFLPSGPRARLFKSQLPKIEPLAAKLKEIGAPR 216
L R PE SG+L C EL V ++AYSPLAQGLLTGKYS PSG R R + +L KIEP+ A L+EIG R
Sbjct: 169 LLERAPERSGLLDACRELGVTLIAYSPLAQGLLTGKYSKASPPSGMRGRRMRKRLTKIEPVVASLREIGEAR 240
BLAST of mRNA_H-elongata_contig109939.805.1 vs. uniprot
Match: UPI001AC25E54 (Pyridoxine 4-dehydrogenase n=1 Tax=Thermoflexales bacterium TaxID=2497639 RepID=UPI001AC25E54) HSP 1 Score: 78.6 bits (192), Expect = 1.380e-15 Identity = 38/70 (54.29%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 1 LATRKPETSGMLRVCEELDVRVLAYSPLAQGLLTGKYSSDFLPSGPRARLFKSQ-LPKIEPLAAKLKEIG 207
L RKPETSG+++VC +L V ++AYSP+A+G+LTGKY+ D +P G R R++ Q L KI+PL L EIG
Sbjct: 187 LLDRKPETSGLVKVCRDLGVTLIAYSPIAKGMLTGKYTPDNVPPGMRGRMYNRQYLGKIQPLIGLLNEIG 256
BLAST of mRNA_H-elongata_contig109939.805.1 vs. uniprot
Match: A0A6U4NZL0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4NZL0_HEMAN) HSP 1 Score: 78.2 bits (191), Expect = 2.830e-15 Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 1 LATRKPETSGMLRVCEELDVRVLAYSPLAQGLLTGKYSSDFLPSGPRARLFKSQLPKIEPLAAKLKEIG 207
L R E +G+ CE+L V +LAYSPLAQGLLTG+YSS LP GPRA + K + +++PL LKE+G
Sbjct: 248 LLHRNIERNGVKEACEDLGVNILAYSPLAQGLLTGRYSSTNLPKGPRANIMKGRFSELDPLLVGLKEVG 316
BLAST of mRNA_H-elongata_contig109939.805.1 vs. uniprot
Match: A0A7S0VLR8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VLR8_9CRYP) HSP 1 Score: 73.9 bits (180), Expect = 3.640e-15 Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 1 LATRKPETSGMLRVCEELDVRVLAYSPLAQGLLTGKYSSDFLPSGPRARLFKSQLPKIEPLAAKLKEIG 207
L R E +G+ CEEL V +LAYSPLAQG+LTG+YS+ LP GPRA + + + +++PL LKE+G
Sbjct: 34 LLHRNIEKNGVKEACEELGVGILAYSPLAQGVLTGRYSASNLPKGPRANIMRGRFDELDPLLDGLKEMG 102
BLAST of mRNA_H-elongata_contig109939.805.1 vs. uniprot
Match: A0A6U1LWV5_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A6U1LWV5_9CHLO) HSP 1 Score: 77.8 bits (190), Expect = 3.750e-15 Identity = 41/75 (54.67%), Postives = 52/75 (69.33%), Query Frame = 1
Query: 1 LATRKPETSGMLRVCEELDVRVLAYSPLAQGLLTGKYSSDFLPSGPRARLFKSQ-LPKIEPLAAKLKEIGAPRSD 222
L R PET+G+L VC+E + ++AYSPLAQG+LTGKYS PSGPR F Q L +EPL + LK+IG+ SD
Sbjct: 238 LMYRAPETNGVLGVCKEKGITLVAYSPLAQGILTGKYSLSNRPSGPRNATFTDQRLRSVEPLLSLLKDIGSAHSD 312
BLAST of mRNA_H-elongata_contig109939.805.1 vs. uniprot
Match: J3MII3_ORYBR (Aldo_ket_red domain-containing protein n=12 Tax=Poaceae TaxID=4479 RepID=J3MII3_ORYBR) HSP 1 Score: 75.9 bits (185), Expect = 1.830e-14 Identity = 35/71 (49.30%), Postives = 52/71 (73.24%), Query Frame = 1
Query: 1 LATRKPETSGMLRVCEELDVRVLAYSPLAQGLLTGKYSSDFLPSGPRARLFKSQ-LPKIEPLAAKLKEIGA 210
L R PE +G+ C+EL + ++AYSP+AQG+LTGKY+ D P+GPR R++ + L K++PL ++KEIGA
Sbjct: 233 LIYRNPEENGVKAACDELGITLIAYSPIAQGILTGKYTPDNPPTGPRGRIYTPEFLTKLQPLINRIKEIGA 303
BLAST of mRNA_H-elongata_contig109939.805.1 vs. uniprot
Match: A0A061DKV5_THECC (NAD(P)-linked oxidoreductase superfamily protein isoform 3 n=2 Tax=Theobroma cacao TaxID=3641 RepID=A0A061DKV5_THECC) HSP 1 Score: 74.7 bits (182), Expect = 2.340e-14 Identity = 34/70 (48.57%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 1 LATRKPETSGMLRVCEELDVRVLAYSPLAQGLLTGKYSSDFLPSGPRARLFKSQ-LPKIEPLAAKLKEIG 207
L R PE +G+ C+EL + ++AYSP+AQG LTGKY+ + LP+GPR+R++ + L K++PL ++KEIG
Sbjct: 136 LIYRAPEQNGVKAACDELGITLIAYSPIAQGALTGKYTPENLPTGPRSRIYTPEFLTKLQPLVNRIKEIG 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109939.805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig109939.805.1 >prot_H-elongata_contig109939.805.1 ID=prot_H-elongata_contig109939.805.1|Name=mRNA_H-elongata_contig109939.805.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp MLRVCEELDVRVLAYSPLAQGLLTGKYSSDFLPSGPRARLFKSQLPKIEPback to top mRNA from alignment at H-elongata_contig109939:295..1094- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig109939.805.1 ID=mRNA_H-elongata_contig109939.805.1|Name=mRNA_H-elongata_contig109939.805.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=800bp|location=Sequence derived from alignment at H-elongata_contig109939:295..1094- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig109939:295..1094- >mRNA_H-elongata_contig109939.805.1 ID=mRNA_H-elongata_contig109939.805.1|Name=mRNA_H-elongata_contig109939.805.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=390bp|location=Sequence derived from alignment at H-elongata_contig109939:295..1094- (Himanthalia elongata Himel1 dioecious)back to top |