prot_H-elongata_contig109603.776.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig109603.776.1
Unique Name	prot_H-elongata_contig109603.776.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	230

Homology

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BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: A0A6H5LD75_9PHAE (GDP-mannose 4,6-dehydratase n=6 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5LD75_9PHAE)

HSP 1 Score: 448 bits (1152), Expect = 5.990e-157
Identity = 213/223 (95.52%), Postives = 219/223 (98.21%), Query Frame = 0

Query:    7 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGEGVEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHVDAGNEHL 229
            QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTI+LGNLDAKRDWGHA+DYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVG EITWVGEGVEEYGH K DPENV+V+VDPRYFRPTEVELLLGDCTKAKKELGWVPEISF ELVKDMMK+DIA+VDAGNEHL
Sbjct:  140 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIYLGNLDAKRDWGHAKDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGTEITWVGEGVEEYGHAKGDPENVLVKVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFTELVKDMMKADIAYVDAGNEHL 362

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BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: A0A8J2SRK3_9STRA (GDP-mannose 4,6-dehydratase n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRK3_9STRA)

HSP 1 Score: 349 bits (896), Expect = 2.650e-117
Identity = 164/218 (75.23%), Postives = 190/218 (87.16%), Query Frame = 0

Query:    7 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGEG--VEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHV 222
            QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQ+ YWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARI +GK KT++LGNLDAKRDWGHARDY++GMWLMVQRDEP DYVLSTGECHSVKEF E +F  VG+ + W G    V+E G    DP  V+V+VDP+YFRPTEV+LL+GDC+KAKK LGW P+++F+ L ++M+ +D+A +
Sbjct:  187 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQYAYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARISQGKMKTLYLGNLDAKRDWGHARDYVEGMWLMVQRDEPDDYVLSTGECHSVKEFCEVAFARVGITVQWKGAAGSVDEIGVDATDPSRVLVKVDPKYFRPTEVDLLVGDCSKAKKLLGWAPKVTFKALAEEMVDADLAEL 404

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BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: A0A4D9D4U1_9STRA (GDP-mannose 4,6-dehydratase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4U1_9STRA)

HSP 1 Score: 347 bits (891), Expect = 6.540e-117
Identity = 160/222 (72.07%), Postives = 195/222 (87.84%), Query Frame = 0

Query:    7 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGE--GVEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHVDAGN 226
            QASTSELYGKVQE+PQ ETTPFYPRSPYGVAKQ+ YW+L+NYREAY M L NGILFNHESPRRGPTFVTRKITRAVARI +G QKT++LGNLDAKRDWGHARDY++GMW+M+Q D P D+VL+TGE H V+EFVE++F++VGME+ W GE   V E G+ K DPE+V+V++DP+YFRPTEVELLLGD  KAKK +GW PE+SF++LVK+M+++DIA V+ G+
Sbjct:  163 QASTSELYGKVQEVPQSETTPFYPRSPYGVAKQYAYWILVNYREAYDMFLVNGILFNHESPRRGPTFVTRKITRAVARIQKGLQKTLYLGNLDAKRDWGHARDYVRGMWMMLQHDTPDDFVLATGETHPVREFVEKAFRHVGMEVEWKGEKGSVHEVGYNKADPEHVLVKIDPQYFRPTEVELLLGDPAKAKKHIGWEPEVSFDDLVKEMVEADIALVEKGD 384

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BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: K0T9K6_THAOC (GDP-mannose 4,6-dehydratase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T9K6_THAOC)

HSP 1 Score: 330 bits (846), Expect = 3.990e-112
Identity = 158/218 (72.48%), Postives = 184/218 (84.40%), Query Frame = 0

Query:    7 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGEG--VEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHV 222
            QASTSELYGKVQE+PQ ETTPFYPRSPY VAKQ+ +W+L+NYREAYGMHLTNGILFNHESPRRG TFVTRKIT AVARI +G +KT++LGN+DAKRDWGHARDY+KGMW+M+Q D P DYVL+TGE H+V+EFVE++F  VG  I W GE   V+E G   DD   V+V++DPRYFRPTEVELLLGD +KAKK LGW  E+ FE LVKDMMK+D+A V
Sbjct:   18 QASTSELYGKVQEVPQSETTPFYPRSPYAVAKQYAFWILVNYREAYGMHLTNGILFNHESPRRGATFVTRKITIAVARISQGLEKTLYLGNIDAKRDWGHARDYVKGMWMMLQHDVPDDYVLATGETHTVREFVEKAFAEVGTTIKWKGETGTVDEIGVDADDESRVLVKIDPRYFRPTEVELLLGDPSKAKKTLGWEAELGFEGLVKDMMKADLAMV 235

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BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: A0A7S2GBW7_9STRA (GDP-mannose 4,6-dehydratase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GBW7_9STRA)

HSP 1 Score: 333 bits (853), Expect = 3.440e-111
Identity = 157/222 (70.72%), Postives = 187/222 (84.23%), Query Frame = 0

Query:    7 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGE--GVEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHVDAGN 226
            QASTSELYGKVQEIPQ ETTPFYPRSPYGVAKQ+ YWM++NYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAV RI +G Q  +FLGN+D++RDWGHARDY+KGMWLMVQRDEP D+VL+T ECHSV+EFVE++F+ V M+I W GE   V+E G    D    +V++D +YFRPTEV+LL+GD  KAKK LGW PEI+F+ LV +MM+ D+  V+AG+
Sbjct:  160 QASTSELYGKVQEIPQTETTPFYPRSPYGVAKQYAYWMIVNYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVCRISKGLQDILFLGNIDSQRDWGHARDYVKGMWLMVQRDEPEDFVLATNECHSVREFVEKAFEAVDMKIKWTGEKGSVDEVGVDASDESRALVKIDLQYFRPTEVDLLIGDPAKAKKLLGWEPEITFDGLVTEMMEEDMKLVEAGD 381

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BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: F0YLN7_AURAN (GDP-mannose 4,6-dehydratase n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLN7_AURAN)

HSP 1 Score: 332 bits (851), Expect = 4.250e-111
Identity = 155/220 (70.45%), Postives = 188/220 (85.45%), Query Frame = 0

Query:    7 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGEG--VEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHVDA 224
            QASTSELYGKVQ IPQ ETTPFYPRSPYGVAKQ+ YWML+NYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAV RI   +QKT++LGNLDAKRDWGHARDY++GMWLMVQRD P DYVL+TGECHSV+EFVE SF++VG+++ W GE    EE G    D  + +V+VDP+Y+RPTEV+LL+GD  KA+++LGW P+I+F++L  +M+ +D+A + A
Sbjct:  143 QASTSELYGKVQAIPQTETTPFYPRSPYGVAKQYAYWMLVNYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVVRIKAQQQKTLYLGNLDAKRDWGHARDYVEGMWLMVQRDVPDDYVLATGECHSVREFVEVSFEHVGIKVKWTGEPGTAEEVGVDAADESHELVKVDPKYYRPTEVDLLVGDAAKARRDLGWKPKITFKKLATEMVDADMAELKA 362

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BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: A0A835Z0Z6_9STRA (GDP-mannose 4,6-dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Z6_9STRA)

HSP 1 Score: 330 bits (847), Expect = 1.410e-110
Identity = 154/221 (69.68%), Postives = 187/221 (84.62%), Query Frame = 0

Query:    7 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGE--GVEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHVDAG 225
            QASTSELYGKVQEIPQ ETTPFYPRSPYGVAKQ+ +WM++NYREAYGM L+NGILFNHESPRRGPTFVTRKITRAV RIHR +Q+ ++LGNL+++RDWGHARDY++GMW+M+Q+D P D+VL+TGE HSVKEFVE SF YVG  + W GE   V+E+G    D   V+V+VDP YFRPTEV+LL+G   KAK+ LGW P+I+F+ LV+DMMK+D+A VD G
Sbjct:  137 QASTSELYGKVQEIPQTETTPFYPRSPYGVAKQYAFWMIVNYREAYGMFLSNGILFNHESPRRGPTFVTRKITRAVCRIHRQRQECLYLGNLESQRDWGHARDYVEGMWMMLQQDTPDDFVLATGEMHSVKEFVEASFAYVGTTVAWKGERGSVDEHGVDAADESRVLVKVDPSYFRPTEVDLLIGSPAKAKRVLGWSPKITFKALVEDMMKADLAEVDTG 357

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BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: A0A7S2XZ47_9STRA (GDP-mannose 4,6-dehydratase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ47_9STRA)

HSP 1 Score: 328 bits (841), Expect = 1.590e-109
Identity = 150/221 (67.87%), Postives = 189/221 (85.52%), Query Frame = 0

Query:    7 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRD-EPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGEGVEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHVDAGN 226
            QASTSELYGKVQEIPQ E TPFYPRSPYGVAKQF +WML+NYREAY MH  NGILFNHESPRRGPTFVTRK+TRAVARIH+G Q+ + LGNLD++RDWGHARDY++GMW+M+QRD E  DYVL+TGECHSV+EFVE++F Y+G+ + W G GV+E G    + + V+V+++PRYFRPTEV+LL+GD +KAK  LGW P+++F+ LV++MM++DI  V+ G+
Sbjct:  150 QASTSELYGKVQEIPQTEKTPFYPRSPYGVAKQFSFWMLVNYREAYNMHCINGILFNHESPRRGPTFVTRKVTRAVARIHKGLQQDLQLGNLDSQRDWGHARDYVEGMWMMMQRDGEAEDYVLATGECHSVREFVEKAFHYIGITLGWRGSGVDEVGFDSANEDRVLVKINPRYFRPTEVDLLVGDASKAKNLLGWSPKVTFQALVEEMMQADIDKVEKGD 370

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BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: A0A7S2VZB8_9STRA (GDP-mannose 4,6-dehydratase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZB8_9STRA)

HSP 1 Score: 327 bits (839), Expect = 1.840e-109
Identity = 153/224 (68.30%), Postives = 187/224 (83.48%), Query Frame = 0

Query:    7 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGE--GVEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHVDAGNEH 228
            QASTSELYGKVQE+PQ ETTPFYPRSPY VAKQ+ +W+L+NYREAYGM+ TNGILFNHESPRRG TFVTRK+TR VA IH  K+K +FLGN+DAKRDWGHARDY++GMWLM+Q+++P DYVL+TGE H+V+EFVE++F  VG+ I W G    V+E G  KDD   V+V++DPRYFRPTEVELLLGD TKAKKELGW    +F+ELVK+M++ D+    +GNE+
Sbjct:  133 QASTSELYGKVQEVPQSETTPFYPRSPYAVAKQYAFWILVNYREAYGMYCTNGILFNHESPRRGNTFVTRKVTRCVANIHLKKEKCLFLGNIDAKRDWGHARDYVEGMWLMLQQEKPDDYVLATGETHTVREFVEKAFAVVGISIVWKGAFGTVDETGVDKDDESRVLVKIDPRYFRPTEVELLLGDPTKAKKELGWTATTTFDELVKEMVQEDLKLFKSGNEN 356

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BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: A0A482T0S9_9ARCH (GDP-mannose 4,6-dehydratase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T0S9_9ARCH)

HSP 1 Score: 320 bits (821), Expect = 3.700e-108
Identity = 150/224 (66.96%), Postives = 184/224 (82.14%), Query Frame = 0

Query:    7 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGEG--VEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHVDAGNEH 228
            QASTSELYGKV+EIPQ E TPFYPRSPYGVAKQ+ YW+++NYREAYGMH TNGILFNHESPRRGPTFVTRKITRAVA+IHRG QKT++LGNLDAKRDWGHA+DY++GMW M+Q ++  DYVL+T E HSV+EF+E++F ++G EI W+GE   V+E G    D   V+V+VDPRYFRPTEV++L+G+  KA K LGW P   F +LVK+M+ +DIA +D    H
Sbjct:   33 QASTSELYGKVREIPQTEDTPFYPRSPYGVAKQYAYWIVVNYREAYGMHATNGILFNHESPRRGPTFVTRKITRAVAKIHRGLQKTLYLGNLDAKRDWGHAKDYVEGMWRMLQTEQGDDYVLATNETHSVREFIEKAFGHIGTEIKWIGERGTVDETGVDAKDESRVLVKVDPRYFRPTEVDILIGNPAKATKALGWKPTTLFGDLVKEMVDADIAALDNPGSH 256

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot

BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5LD75_9PHAE	5.990e-157	95.52	GDP-mannose 4,6-dehydratase n=6 Tax=Phaeophyceae T...	[more]
A0A8J2SRK3_9STRA	2.650e-117	75.23	GDP-mannose 4,6-dehydratase n=3 Tax=Pelagomonas ca...	[more]
A0A4D9D4U1_9STRA	6.540e-117	72.07	GDP-mannose 4,6-dehydratase n=1 Tax=Nannochloropsi...	[more]
K0T9K6_THAOC	3.990e-112	72.48	GDP-mannose 4,6-dehydratase n=1 Tax=Thalassiosira ...	[more]
A0A7S2GBW7_9STRA	3.440e-111	70.72	GDP-mannose 4,6-dehydratase n=1 Tax=Florenciella p...	[more]
F0YLN7_AURAN	4.250e-111	70.45	GDP-mannose 4,6-dehydratase n=2 Tax=Aureococcus an...	[more]
A0A835Z0Z6_9STRA	1.410e-110	69.68	GDP-mannose 4,6-dehydratase n=1 Tax=Tribonema minu...	[more]
A0A7S2XZ47_9STRA	1.590e-109	67.87	GDP-mannose 4,6-dehydratase n=1 Tax=Fibrocapsa jap...	[more]
A0A7S2VZB8_9STRA	1.840e-109	68.30	GDP-mannose 4,6-dehydratase n=1 Tax=Eucampia antar...	[more]
A0A482T0S9_9ARCH	3.700e-108	66.96	GDP-mannose 4,6-dehydratase n=1 Tax=archaeon TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 7..70 e-value: 2.4E-7 score: 32.5
None	No IPR available	GENE3D	3.90.25.10		coord: 131..200 e-value: 5.8E-17 score: 63.9
None	No IPR available	GENE3D	3.90.25.10		coord: 71..130 e-value: 7.7E-20 score: 73.4
None	No IPR available	PANTHER	PTHR43715:SF1	GDP-MANNOSE 4,6-DEHYDRATASE	coord: 7..222
None	No IPR available	PANTHER	PTHR43715	FAMILY NOT NAMED	coord: 7..222
IPR016040	NAD(P)-binding domain	PFAM	PF16363	GDP_Man_Dehyd	coord: 7..214 e-value: 1.5E-94 score: 317.2
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 8..218

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig109603	contig	H-elongata_contig109603:95..1506 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig109603.776.1	mRNA_H-elongata_contig109603.776.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig109603 95..1506 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig109603.776.1 ID=prot_H-elongata_contig109603.776.1|Name=mRNA_H-elongata_contig109603.776.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=230bp
MSPPSDQASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYRE
AYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDA
KRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGME
ITWVGEGVEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELG
WVPEISFEELVKDMMKSDIAHVDAGNEHL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016040	NAD(P)-bd_dom
IPR036291	NAD(P)-bd_dom_sf