mRNA_H-elongata_contig109603.776.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig109603.776.1
Unique NamemRNA_H-elongata_contig109603.776.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: A0A6H5LD75_9PHAE (GDP-mannose 4,6-dehydratase n=6 Tax=Phaeophyceae TaxID=2870 RepID=A0A6H5LD75_9PHAE)

HSP 1 Score: 448 bits (1152), Expect = 5.990e-157
Identity = 213/223 (95.52%), Postives = 219/223 (98.21%), Query Frame = 1
Query:   19 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGEGVEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHVDAGNEHL 687
            QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTI+LGNLDAKRDWGHA+DYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVG EITWVGEGVEEYGH K DPENV+V+VDPRYFRPTEVELLLGDCTKAKKELGWVPEISF ELVKDMMK+DIA+VDAGNEHL
Sbjct:  140 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIYLGNLDAKRDWGHAKDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGTEITWVGEGVEEYGHAKGDPENVLVKVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFTELVKDMMKADIAYVDAGNEHL 362          
BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: A0A8J2SRK3_9STRA (GDP-mannose 4,6-dehydratase n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRK3_9STRA)

HSP 1 Score: 349 bits (896), Expect = 2.650e-117
Identity = 164/218 (75.23%), Postives = 190/218 (87.16%), Query Frame = 1
Query:   19 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGEG--VEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHV 666
            QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQ+ YWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARI +GK KT++LGNLDAKRDWGHARDY++GMWLMVQRDEP DYVLSTGECHSVKEF E +F  VG+ + W G    V+E G    DP  V+V+VDP+YFRPTEV+LL+GDC+KAKK LGW P+++F+ L ++M+ +D+A +
Sbjct:  187 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQYAYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARISQGKMKTLYLGNLDAKRDWGHARDYVEGMWLMVQRDEPDDYVLSTGECHSVKEFCEVAFARVGITVQWKGAAGSVDEIGVDATDPSRVLVKVDPKYFRPTEVDLLVGDCSKAKKLLGWAPKVTFKALAEEMVDADLAEL 404          
BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: A0A4D9D4U1_9STRA (GDP-mannose 4,6-dehydratase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4U1_9STRA)

HSP 1 Score: 347 bits (891), Expect = 6.540e-117
Identity = 160/222 (72.07%), Postives = 195/222 (87.84%), Query Frame = 1
Query:   19 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGE--GVEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHVDAGN 678
            QASTSELYGKVQE+PQ ETTPFYPRSPYGVAKQ+ YW+L+NYREAY M L NGILFNHESPRRGPTFVTRKITRAVARI +G QKT++LGNLDAKRDWGHARDY++GMW+M+Q D P D+VL+TGE H V+EFVE++F++VGME+ W GE   V E G+ K DPE+V+V++DP+YFRPTEVELLLGD  KAKK +GW PE+SF++LVK+M+++DIA V+ G+
Sbjct:  163 QASTSELYGKVQEVPQSETTPFYPRSPYGVAKQYAYWILVNYREAYDMFLVNGILFNHESPRRGPTFVTRKITRAVARIQKGLQKTLYLGNLDAKRDWGHARDYVRGMWMMLQHDTPDDFVLATGETHPVREFVEKAFRHVGMEVEWKGEKGSVHEVGYNKADPEHVLVKIDPQYFRPTEVELLLGDPAKAKKHIGWEPEVSFDDLVKEMVEADIALVEKGD 384          
BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: K0T9K6_THAOC (GDP-mannose 4,6-dehydratase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T9K6_THAOC)

HSP 1 Score: 330 bits (846), Expect = 3.990e-112
Identity = 158/218 (72.48%), Postives = 184/218 (84.40%), Query Frame = 1
Query:   19 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGEG--VEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHV 666
            QASTSELYGKVQE+PQ ETTPFYPRSPY VAKQ+ +W+L+NYREAYGMHLTNGILFNHESPRRG TFVTRKIT AVARI +G +KT++LGN+DAKRDWGHARDY+KGMW+M+Q D P DYVL+TGE H+V+EFVE++F  VG  I W GE   V+E G   DD   V+V++DPRYFRPTEVELLLGD +KAKK LGW  E+ FE LVKDMMK+D+A V
Sbjct:   18 QASTSELYGKVQEVPQSETTPFYPRSPYAVAKQYAFWILVNYREAYGMHLTNGILFNHESPRRGATFVTRKITIAVARISQGLEKTLYLGNIDAKRDWGHARDYVKGMWMMLQHDVPDDYVLATGETHTVREFVEKAFAEVGTTIKWKGETGTVDEIGVDADDESRVLVKIDPRYFRPTEVELLLGDPSKAKKTLGWEAELGFEGLVKDMMKADLAMV 235          
BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: A0A7S2GBW7_9STRA (GDP-mannose 4,6-dehydratase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GBW7_9STRA)

HSP 1 Score: 333 bits (853), Expect = 3.440e-111
Identity = 157/222 (70.72%), Postives = 187/222 (84.23%), Query Frame = 1
Query:   19 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGE--GVEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHVDAGN 678
            QASTSELYGKVQEIPQ ETTPFYPRSPYGVAKQ+ YWM++NYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAV RI +G Q  +FLGN+D++RDWGHARDY+KGMWLMVQRDEP D+VL+T ECHSV+EFVE++F+ V M+I W GE   V+E G    D    +V++D +YFRPTEV+LL+GD  KAKK LGW PEI+F+ LV +MM+ D+  V+AG+
Sbjct:  160 QASTSELYGKVQEIPQTETTPFYPRSPYGVAKQYAYWMIVNYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVCRISKGLQDILFLGNIDSQRDWGHARDYVKGMWLMVQRDEPEDFVLATNECHSVREFVEKAFEAVDMKIKWTGEKGSVDEVGVDASDESRALVKIDLQYFRPTEVDLLIGDPAKAKKLLGWEPEITFDGLVTEMMEEDMKLVEAGD 381          
BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: F0YLN7_AURAN (GDP-mannose 4,6-dehydratase n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLN7_AURAN)

HSP 1 Score: 332 bits (851), Expect = 4.250e-111
Identity = 155/220 (70.45%), Postives = 188/220 (85.45%), Query Frame = 1
Query:   19 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGEG--VEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHVDA 672
            QASTSELYGKVQ IPQ ETTPFYPRSPYGVAKQ+ YWML+NYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAV RI   +QKT++LGNLDAKRDWGHARDY++GMWLMVQRD P DYVL+TGECHSV+EFVE SF++VG+++ W GE    EE G    D  + +V+VDP+Y+RPTEV+LL+GD  KA+++LGW P+I+F++L  +M+ +D+A + A
Sbjct:  143 QASTSELYGKVQAIPQTETTPFYPRSPYGVAKQYAYWMLVNYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVVRIKAQQQKTLYLGNLDAKRDWGHARDYVEGMWLMVQRDVPDDYVLATGECHSVREFVEVSFEHVGIKVKWTGEPGTAEEVGVDAADESHELVKVDPKYYRPTEVDLLVGDAAKARRDLGWKPKITFKKLATEMVDADMAELKA 362          
BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: A0A835Z0Z6_9STRA (GDP-mannose 4,6-dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Z6_9STRA)

HSP 1 Score: 330 bits (847), Expect = 1.410e-110
Identity = 154/221 (69.68%), Postives = 187/221 (84.62%), Query Frame = 1
Query:   19 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGE--GVEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHVDAG 675
            QASTSELYGKVQEIPQ ETTPFYPRSPYGVAKQ+ +WM++NYREAYGM L+NGILFNHESPRRGPTFVTRKITRAV RIHR +Q+ ++LGNL+++RDWGHARDY++GMW+M+Q+D P D+VL+TGE HSVKEFVE SF YVG  + W GE   V+E+G    D   V+V+VDP YFRPTEV+LL+G   KAK+ LGW P+I+F+ LV+DMMK+D+A VD G
Sbjct:  137 QASTSELYGKVQEIPQTETTPFYPRSPYGVAKQYAFWMIVNYREAYGMFLSNGILFNHESPRRGPTFVTRKITRAVCRIHRQRQECLYLGNLESQRDWGHARDYVEGMWMMLQQDTPDDFVLATGEMHSVKEFVEASFAYVGTTVAWKGERGSVDEHGVDAADESRVLVKVDPSYFRPTEVDLLIGSPAKAKRVLGWSPKITFKALVEDMMKADLAEVDTG 357          
BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: A0A7S2XZ47_9STRA (GDP-mannose 4,6-dehydratase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ47_9STRA)

HSP 1 Score: 328 bits (841), Expect = 1.590e-109
Identity = 150/221 (67.87%), Postives = 189/221 (85.52%), Query Frame = 1
Query:   19 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRD-EPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGEGVEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHVDAGN 678
            QASTSELYGKVQEIPQ E TPFYPRSPYGVAKQF +WML+NYREAY MH  NGILFNHESPRRGPTFVTRK+TRAVARIH+G Q+ + LGNLD++RDWGHARDY++GMW+M+QRD E  DYVL+TGECHSV+EFVE++F Y+G+ + W G GV+E G    + + V+V+++PRYFRPTEV+LL+GD +KAK  LGW P+++F+ LV++MM++DI  V+ G+
Sbjct:  150 QASTSELYGKVQEIPQTEKTPFYPRSPYGVAKQFSFWMLVNYREAYNMHCINGILFNHESPRRGPTFVTRKVTRAVARIHKGLQQDLQLGNLDSQRDWGHARDYVEGMWMMMQRDGEAEDYVLATGECHSVREFVEKAFHYIGITLGWRGSGVDEVGFDSANEDRVLVKINPRYFRPTEVDLLVGDASKAKNLLGWSPKVTFQALVEEMMQADIDKVEKGD 370          
BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: A0A7S2VZB8_9STRA (GDP-mannose 4,6-dehydratase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZB8_9STRA)

HSP 1 Score: 327 bits (839), Expect = 1.840e-109
Identity = 153/224 (68.30%), Postives = 187/224 (83.48%), Query Frame = 1
Query:   19 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGE--GVEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHVDAGNEH 684
            QASTSELYGKVQE+PQ ETTPFYPRSPY VAKQ+ +W+L+NYREAYGM+ TNGILFNHESPRRG TFVTRK+TR VA IH  K+K +FLGN+DAKRDWGHARDY++GMWLM+Q+++P DYVL+TGE H+V+EFVE++F  VG+ I W G    V+E G  KDD   V+V++DPRYFRPTEVELLLGD TKAKKELGW    +F+ELVK+M++ D+    +GNE+
Sbjct:  133 QASTSELYGKVQEVPQSETTPFYPRSPYAVAKQYAFWILVNYREAYGMYCTNGILFNHESPRRGNTFVTRKVTRCVANIHLKKEKCLFLGNIDAKRDWGHARDYVEGMWLMLQQEKPDDYVLATGETHTVREFVEKAFAVVGISIVWKGAFGTVDETGVDKDDESRVLVKIDPRYFRPTEVELLLGDPTKAKKELGWTATTTFDELVKEMVQEDLKLFKSGNEN 356          
BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Match: A0A482T0S9_9ARCH (GDP-mannose 4,6-dehydratase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T0S9_9ARCH)

HSP 1 Score: 320 bits (821), Expect = 3.700e-108
Identity = 150/224 (66.96%), Postives = 184/224 (82.14%), Query Frame = 1
Query:   19 QASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYREAYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDAKRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGMEITWVGEG--VEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELGWVPEISFEELVKDMMKSDIAHVDAGNEH 684
            QASTSELYGKV+EIPQ E TPFYPRSPYGVAKQ+ YW+++NYREAYGMH TNGILFNHESPRRGPTFVTRKITRAVA+IHRG QKT++LGNLDAKRDWGHA+DY++GMW M+Q ++  DYVL+T E HSV+EF+E++F ++G EI W+GE   V+E G    D   V+V+VDPRYFRPTEV++L+G+  KA K LGW P   F +LVK+M+ +DIA +D    H
Sbjct:   33 QASTSELYGKVREIPQTEDTPFYPRSPYGVAKQYAYWIVVNYREAYGMHATNGILFNHESPRRGPTFVTRKITRAVAKIHRGLQKTLYLGNLDAKRDWGHAKDYVEGMWRMLQTEQGDDYVLATNETHSVREFIEKAFGHIGTEIKWIGERGTVDETGVDAKDESRVLVKVDPRYFRPTEVDILIGNPAKATKALGWKPTTLFGDLVKEMVDADIAALDNPGSH 256          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig109603.776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LD75_9PHAE5.990e-15795.52GDP-mannose 4,6-dehydratase n=6 Tax=Phaeophyceae T... [more]
A0A8J2SRK3_9STRA2.650e-11775.23GDP-mannose 4,6-dehydratase n=3 Tax=Pelagomonas ca... [more]
A0A4D9D4U1_9STRA6.540e-11772.07GDP-mannose 4,6-dehydratase n=1 Tax=Nannochloropsi... [more]
K0T9K6_THAOC3.990e-11272.48GDP-mannose 4,6-dehydratase n=1 Tax=Thalassiosira ... [more]
A0A7S2GBW7_9STRA3.440e-11170.72GDP-mannose 4,6-dehydratase n=1 Tax=Florenciella p... [more]
F0YLN7_AURAN4.250e-11170.45GDP-mannose 4,6-dehydratase n=2 Tax=Aureococcus an... [more]
A0A835Z0Z6_9STRA1.410e-11069.68GDP-mannose 4,6-dehydratase n=1 Tax=Tribonema minu... [more]
A0A7S2XZ47_9STRA1.590e-10967.87GDP-mannose 4,6-dehydratase n=1 Tax=Fibrocapsa jap... [more]
A0A7S2VZB8_9STRA1.840e-10968.30GDP-mannose 4,6-dehydratase n=1 Tax=Eucampia antar... [more]
A0A482T0S9_9ARCH3.700e-10866.96GDP-mannose 4,6-dehydratase n=1 Tax=archaeon TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig109603contigH-elongata_contig109603:95..1506 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score452.2
Seed ortholog evalue1.4e-124
Seed eggNOG ortholog2880.D8LKT9
Preferred nameGMDS
KEGG rclassRC00402
KEGG koko:K01711
KEGG ReactionR00888
KEGG Pathwayko00051,ko00520,ko01100,map00051,map00520,map01100
GOsGO:0000003,GO:0000166,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006793,GO:0006807,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007276,GO:0007281,GO:0007292,GO:0008150,GO:0008152,GO:0008446,GO:0009058,GO:0009225,GO:0009226,GO:0009636,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019673,GO:0019953,GO:0022412,GO:0022414,GO:0023052,GO:0030154,GO:0032501,GO:0032502,GO:0032504,GO:0034641,GO:0034654,GO:0036094,GO:0042221,GO:0042350,GO:0042351,GO:0042802,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0046368,GO:0046483,GO:0048037,GO:0048468,GO:0048477,GO:0048609,GO:0048856,GO:0048869,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051302,GO:0051704,GO:0051716,GO:0055086,GO:0065007,GO:0070401,GO:0071704,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:2000035
EggNOG free text desc.GDP-mannose 4,6-dehydratase activity
EggNOG OGsCOG1089@1,KOG1372@2759
EC4.2.1.47
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size690
Cds size690
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig109603.776.1prot_H-elongata_contig109603.776.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig109603 95..1506 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929622.700935-CDS-H-elongata_contig109603:94..2441622929622.700935-CDS-H-elongata_contig109603:94..244Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109603 95..244 +
1691679095.359952-CDS-H-elongata_contig109603:94..2441691679095.359952-CDS-H-elongata_contig109603:94..244Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109603 95..244 +
1622929622.712263-CDS-H-elongata_contig109603:452..6071622929622.712263-CDS-H-elongata_contig109603:452..607Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109603 453..607 +
1691679095.3732965-CDS-H-elongata_contig109603:452..6071691679095.3732965-CDS-H-elongata_contig109603:452..607Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109603 453..607 +
1622929622.7222035-CDS-H-elongata_contig109603:767..8881622929622.7222035-CDS-H-elongata_contig109603:767..888Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109603 768..888 +
1691679095.3817506-CDS-H-elongata_contig109603:767..8881691679095.3817506-CDS-H-elongata_contig109603:767..888Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109603 768..888 +
1622929622.9623835-CDS-H-elongata_contig109603:1093..12341622929622.9623835-CDS-H-elongata_contig109603:1093..1234Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109603 1094..1234 +
1691679095.3908095-CDS-H-elongata_contig109603:1093..12341691679095.3908095-CDS-H-elongata_contig109603:1093..1234Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109603 1094..1234 +
1622929622.977285-CDS-H-elongata_contig109603:1383..15061622929622.977285-CDS-H-elongata_contig109603:1383..1506Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109603 1384..1506 +
1691679095.4033191-CDS-H-elongata_contig109603:1383..15061691679095.4033191-CDS-H-elongata_contig109603:1383..1506Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig109603 1384..1506 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig109603.776.1

>prot_H-elongata_contig109603.776.1 ID=prot_H-elongata_contig109603.776.1|Name=mRNA_H-elongata_contig109603.776.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=230bp
MSPPSDQASTSELYGKVQEIPQKETTPFYPRSPYGVAKQFGYWMLINYRE
AYGMHLTNGILFNHESPRRGPTFVTRKITRAVARIHRGKQKTIFLGNLDA
KRDWGHARDYIKGMWLMVQRDEPSDYVLSTGECHSVKEFVEESFKYVGME
ITWVGEGVEEYGHVKDDPENVVVRVDPRYFRPTEVELLLGDCTKAKKELG
WVPEISFEELVKDMMKSDIAHVDAGNEHL*
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mRNA from alignment at H-elongata_contig109603:95..1506+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig109603.776.1 ID=mRNA_H-elongata_contig109603.776.1|Name=mRNA_H-elongata_contig109603.776.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1412bp|location=Sequence derived from alignment at H-elongata_contig109603:95..1506+ (Himanthalia elongata Himel1 dioecious)
ATGTCGCCACCCTCTGACCAGGCCTCCACCTCCGAGCTTTACGGAAAGGT GCAGGAAATTCCCCAGAAGGAGACGACCCCCTTCTACCCGCGTTCGCCCT ACGGTGTGGCGAAGCAGTTCGGCTACTGGATGCTCATCAACTATCGCGAG GTGATGTCTGCTTTTTGTGAACTCCCAAGTAGACGAGTCACGACGGCCTC ACTTAGAGCCTCCACTGGGAGGAAGAAAAAGAGGCCCAAAGGAGGCAATA ATTACGATATCGAGAGTGTATCTCATGTCGAATATCTTGCGGCCGCAAGT TAATCCTGCCCGTCACGCTCTCGCTTCTCGCCCCCACCTACGTCGACCAT GGTTGCAGGCGTACGGGATGCACCTCACCAACGGTATCCTTTTCAATCAC GAGAGCCCCCGCCGTGGCCCTACCTTCGTGACCCGTAAGATCACGCGGGC TGTGGCCCGCATCCACCGAGGAAAGCAGAAGACCATCTTCCTCGGCAACC TTGACGCCAAGCGGTGCGTCTCGCCCCGCGCGTTGTTGACAGCCCCCCAG TCGTTGCTTTCCGTCTTGAGTATATCCGATGTGTCCAATGTTAGGCTGGA TGACATCGCCGAGAGTAATGCGGTGCACCCTCTAATGTCCAAACCCACGC GCGATACCATGCCATGTCCGCAGTGATTGGGGACACGCGAGGGACTACAT CAAGGGCATGTGGCTCATGGTGCAGAGGGACGAGCCCAGCGACTACGTGC TCTCCACCGGGGAGTGCCACAGCGTGAAGGAGTTCGTTGAGGAGGTGAAA AGGTTATATTTTTTTCCCATACGACGCACGCAAAGGCCGGTGGGGGGTTC ATCCGCTGGTCATTTTGATTCCCATTCATATACTGCCAACGCACCTCGGA GCGCCGAAGCAGTTACTTGCGTCGTGGCTTCATCTGACCTTAATTGCTTC CCTGGCATATATCTCTTCTTGATTCTATCTCCTCTCGATCTCGATTCAGT CCTTCAAGTACGTGGGGATGGAGATCACTTGGGTAGGTGAAGGTGTGGAA GAGTACGGGCACGTGAAGGACGACCCTGAAAACGTTGTGGTCCGTGTCGA CCCCCGCTACTTCCGGCCCACCGAGGTCGAGCTTCTCCTGGTGAGTTGAT ACACCCTGTTTTGTTTTTTTCAAAACACTTTCCCGGTTTTTCAATTTATA AAATGGAATGTCAAGTAATTTGGTGAGGTCTGACTCAAAATGGGTGCAAT TTTTTCGTTGTTTCCTACGGCCGCCGCTATCCTTTCTAGGGTGACTGCAC TAAGGCCAAGAAGGAGCTTGGATGGGTCCCCGAGATCTCCTTCGAGGAGC TTGTGAAGGACATGATGAAATCCGACATCGCCCACGTCGACGCTGGAAAT GAGCACCTTTAA
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Coding sequence (CDS) from alignment at H-elongata_contig109603:95..1506+

>mRNA_H-elongata_contig109603.776.1 ID=mRNA_H-elongata_contig109603.776.1|Name=mRNA_H-elongata_contig109603.776.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1380bp|location=Sequence derived from alignment at H-elongata_contig109603:95..1506+ (Himanthalia elongata Himel1 dioecious)
ATGTCGCCACCCTCTGACCAGGCCTCCACCTCCGAGCTTTACGGAAAGGT
GCAGGAAATTCCCCAGAAGGAGACGACCCCCTTCTACCCGCGTTCGCCCT
ACGGTGTGGCGAAGCAGTTCGGCTACTGGATGCTCATCAACTATCGCGAG
ATGTCGCCACCCTCTGACCAGGCCTCCACCTCCGAGCTTTACGGAAAGGT
GCAGGAAATTCCCCAGAAGGAGACGACCCCCTTCTACCCGCGTTCGCCCT
ACGGTGTGGCGAAGCAGTTCGGCTACTGGATGCTCATCAACTATCGCGAG
GCGTACGGGATGCACCTCACCAACGGTATCCTTTTCAATCACGAGAGCCC
CCGCCGTGGCCCTACCTTCGTGACCCGTAAGATCACGCGGGCTGTGGCCC
GCATCCACCGAGGAAAGCAGAAGACCATCTTCCTCGGCAACCTTGACGCC
AAGCGGCGTACGGGATGCACCTCACCAACGGTATCCTTTTCAATCACGAG
AGCCCCCGCCGTGGCCCTACCTTCGTGACCCGTAAGATCACGCGGGCTGT
GGCCCGCATCCACCGAGGAAAGCAGAAGACCATCTTCCTCGGCAACCTTG
ACGCCAAGCGTGATTGGGGACACGCGAGGGACTACATCAAGGGCATGTGG
CTCATGGTGCAGAGGGACGAGCCCAGCGACTACGTGCTCTCCACCGGGGA
GTGCCACAGCGTGAAGGAGTTCGTTGAGGAGTGATTGGGGACACGCGAGG
GACTACATCAAGGGCATGTGGCTCATGGTGCAGAGGGACGAGCCCAGCGA
CTACGTGCTCTCCACCGGGGAGTGCCACAGCGTGAAGGAGTTCGTTGAGG
AGTCCTTCAAGTACGTGGGGATGGAGATCACTTGGGTAGGTGAAGGTGTG
GAAGAGTACGGGCACGTGAAGGACGACCCTGAAAACGTTGTGGTCCGTGT
CGACCCCCGCTACTTCCGGCCCACCGAGGTCGAGCTTCTCCTGTCCTTCA
AGTACGTGGGGATGGAGATCACTTGGGTAGGTGAAGGTGTGGAAGAGTAC
GGGCACGTGAAGGACGACCCTGAAAACGTTGTGGTCCGTGTCGACCCCCG
CTACTTCCGGCCCACCGAGGTCGAGCTTCTCCTGGGTGACTGCACTAAGG
CCAAGAAGGAGCTTGGATGGGTCCCCGAGATCTCCTTCGAGGAGCTTGTG
AAGGACATGATGAAATCCGACATCGCCCACGTCGACGCTGGAAATGAGCA
CCTTTAAGGTGACTGCACTAAGGCCAAGAAGGAGCTTGGATGGGTCCCCG
AGATCTCCTTCGAGGAGCTTGTGAAGGACATGATGAAATCCGACATCGCC
CACGTCGACGCTGGAAATGAGCACCTTTAA
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