mRNA_H-elongata_contig10945.766.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10945.766.1 vs. uniprot
Match: D7FZL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL8_ECTSI) HSP 1 Score: 484 bits (1245), Expect = 9.240e-162 Identity = 283/581 (48.71%), Postives = 353/581 (60.76%), Query Frame = 1
Query: 1 SGGRVWNSLKTNLSKHTCCFSDFRWPEDAPLFPSG-AQIRQYIEDYATTFDLRRFVRFGHVVTS----VSRSSTGAWYVEFMKSVTPEVGREGDRHT---------------EVFDRCIVASGIFSEPYFPPPSKVQGIVDAVQTGWATHSAAYRDPSFSAGKTVLVVGCAFSGAEIASDLARTASRCLASTGRPSLFLPRLIPKTGGDRGARADDRESHPPSPGGEGGGRNVNIGDGCGCKKSSQPLVPLDIALYSRKGRAEFKASPASSEEKVGAVRQFLLQLSGRDPGEIHDALRLDGDSDDVRPPH-----VAVSDEFLDRVRDGLIEVRPRLIAVDAREKKARFADGTIEEVDHIIFCTGLRPRLSFLPQSVLHQLEYEPDDLLQPLILEHQTWKACLPDLAFVGMYRGPYLGVMELQARWATRMWGGLVDPPPALASDAALEESRIVRAKFPRPQFPTDYVDMMEALAMVAGLIPSSSPVTQSKSKIPAARDGPSYVLQDASTTPEIQQSDIVSLGEDSMENPQISSDVDGGFGSSDGCLIREINQVMEWMWSGPLLPCHYFIRQHLGNDLSSVD 1668
SGGRVW+SLKTNLSKHTCCFSDFRWP D P FPS A++RQYIEDYA FDL + VRFG VT+ ++ + W + F + GD+ T E FD+CI+ASGIFSEP+FPP V+GI +AV+ GWATH AAYRDP F G +VLVVGCAFSGAEIAS ++R ++G D + E HP +P R D ++ P VPLD+ALYSR+ RA K +PAS EK+ + R+FL++L+GRDPG+ H+ALRL S++ V VSD+FLDRVRDG IE+R RL+A+D E+ RF+DG +E+VDH+I CTGLRP L FLP VL QLE++ DLLQPLIL Q W +PDL FVG+YRGPY GVMELQARW RMW G V P S AAL+ESR VR PRPQFPTDYVDMME LA VAGL+PS + S P++ P L + + + E + + + + ++ +GG S +G I +N E MWSGPLLPCHY + QHL S D
Sbjct: 44 SGGRVWSSLKTNLSKHTCCFSDFRWPVDTPDFPSSEARLRQYIEDYAAHFDLAKHVRFGVSVTAAVPCLAADGSPRWNITFTSTTHRRCAARGDQRTTDPSVTAQEDVVQRTETFDKCIIASGIFSEPHFPP---VEGISEAVEQGWATHGAAYRDPGFFGGDSVLVVGCAFSGAEIASAHVGASARR----------------RSGDDSSSDKRGSEKHPDNP------RCTQ--DTPPHLATASPRVPLDLALYSRRARAGSKLAPAS--EKLESSRKFLVELAGRDPGDAHEALRLSQGSENSHGSESVSVRVVVSDDFLDRVRDGCIEIRQRLVALDTTERTVRFSDGKVEKVDHVILCTGLRPSLEFLPGDVLGQLEHDKGDLLQPLILHLQAWNPSVPDLGFVGVYRGPYFGVMELQARWIARMWSGAVPMPTETESAAALQESRSVRTVIPRPQFPTDYVDMMEGLAGVAGLLPSKR---KDLSSSPSSAVSPVNCLGEIADSEEFV---AMMRSQRPLSGAKGTAGREGG--SEEGDAIGVLN---ERMWSGPLLPCHYRL-QHLDGRASPCD 583
BLAST of mRNA_H-elongata_contig10945.766.1 vs. uniprot
Match: A0A6H5KU92_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU92_9PHAE) HSP 1 Score: 485 bits (1249), Expect = 5.950e-157 Identity = 300/667 (44.98%), Postives = 370/667 (55.47%), Query Frame = 1
Query: 4 GGRVWNSLKTNLSKHTCCFSDFRWPEDAPLFPSGAQIRQYIEDYATTFDLRRFVRFGHVVTSV-----SRSSTGAWYVEFMKSVTPEVGREGDRHT---------------EVFDRCIVASGIFSEPYFPPPSKVQGIVDAVQTGWATHSAAYRDPSFSAGKTVLVVGCAFSGAEIASDLARTASRCLASTGRPSLFLPRLI--------------PKTGGDRGARADDRESHPPSPGG-------------------EGGGRNVNIGDGCGCKK-------SSQPLVPLDIALYSRKGRAEFKASPASSEEKVGAVRQFLLQLSGRDPGEIHDALRL--------DGDSDDVRPPHVAVSDEFLDRVR-----------------------------------DGLIEVRPRLIAVDAREKKARFADGTIEEVDHIIFCTGLRPRLSFLPQSVLHQLEYEPDDLLQPLILEHQTWKACLPDLAFVGMYRGPYLGVMELQARWATRMWGGLVDPPPALASDAALEESRIVRAKFPRPQFPTDYVDMMEALAMVAGLIPSSSPVTQSKSKIPAARDGPSYVLQDASTTPEIQQSDIVSLGEDS--------MENPQISSDVDGGFGSSDGCLIRE-INQVMEWMWSGPLLPCHYFIRQHLGNDLSSVD 1668
GGRVW+SLKTNLSKHTCCFSDFRWP D P FPS A++RQYIEDYA FDL + VRFG +VT+V + + + W + F + GD+ T E FD+CI+ASG+FSE +FPP V+GI +AV+ GWATH AAYRDP AGK+VLVVGCAFSGAEIAS RCLA+TGRPS+FLPR + P+ G A + G GGG++ D C + ++ P VPLD+ALYSR+ RA K +PA EK+ R FL++L+GRDPG+ H+ALRL D DS VR V VSD+FLDRVR DG +E+R RL+A+D E+ RF+DG +E+VDH+IFCTGLRP L FLP VL QLE++ DLLQPLIL Q W +PDL FVG+YRGPY GVMELQARW TRMW G V P S AAL+ESR VR PRPQFPTDYVDMME LA VAGL+PS+ +D S++P S + LGE++ +++ + S G G R+ I + E MWSGPLLPCHY + QHL +S D
Sbjct: 380 GGRVWSSLKTNLSKHTCCFSDFRWPVDTPDFPSSARLRQYIEDYAAHFDLAKHVRFGVLVTAVVPRPAADAGSPRWNITFTSATHGRCAARGDQRTTDPSVPTQEDVVQRTETFDKCIIASGVFSELHFPP---VEGISEAVEQGWATHGAAYRDPGLFAGKSVLVVGCAFSGAEIASG------RCLAATGRPSIFLPRFVDIYAARGPPSSASVPQDGAGNVAAKPGNGTSTAGDGALQSAHSARRRSGDNLTSTKRGGGKHP---DNPRCTQDTPPPLATASPRVPLDLALYSRRARAGSKLAPAL--EKLEKSRNFLVKLAGRDPGDAHEALRLSQRSENRHDSDSGSVR---VVVSDDFLDRVRRVEANWGEVSHACRPPRRVLLRVHFEMTGPFSKVRDGCVEIRQRLVALDTTERTVRFSDGDVEKVDHMIFCTGLRPSLGFLPGDVLRQLEHDKGDLLQPLILHLQAWNPSVPDLGFVGVYRGPYFGVMELQARWITRMWSGAVPMPTEAESAAALQESRSVRTATPRPQFPTDYVDMMEGLAGVAGLLPSNR--------------------KDLSSSPSSAVSPVDCLGENADSAELVAMIQSQRPLSGAKGTTGREGASEERDAIGALNERMWSGPLLPCHYRL-QHLDARVSPCD 1008
BLAST of mRNA_H-elongata_contig10945.766.1 vs. uniprot
Match: A0A2X3KK38_9ACTN (Uncharacterized protein n=1 Tax=Frankia sp. Ea1.12 TaxID=573499 RepID=A0A2X3KK38_9ACTN) HSP 1 Score: 270 bits (689), Expect = 2.420e-80 Identity = 174/457 (38.07%), Postives = 232/457 (50.77%), Query Frame = 1
Query: 7 GRVWNSLKTNLSKHTCCFSDFRWPEDAPLFPSGAQIRQYIEDYATTFDLRRFVRFGHVVTSVSRSSTGAWYVEFMKSVTPEVGREGDRHTEVFDRCIVASGIFSEPYFPPPSKVQGIVDAVQTGWATHSAAYRDPSFSAGKTVLVVGCAFSGAEIASDLARTASRCLASTGRPSLFLPRLIPKTGGDRGARADDRESHPPSPGGEGGGRNVNIGDGCGCKKSSQPLVPLDIALYSRKGRAEFKASPASSEEKVGAVRQFLLQLSGRDPGEIHDALRLDGDSDDVRPPHVAVSDEFLDRVRDGLIEVRPRLIAVDAR--EKKARFAD-GTIEEVDHIIFCTGLRPRLSFLPQSVLHQLEYEPDDLLQPLILEHQTWKACLPDLAFVGMYRGPYLGVMELQARWATRMWGGLVDPPPALASDAALEESRIVRAKFPRPQFPTDYVDMMEALAMVAGLIP 1368
G VW L TN+S+ TC SD+ WP P FP A + +Y++ YA FD R +RFG VT V R S G W V F + G EVFD +VA+G F P FP +V G D G + HS AYR P+ G+ V+VVG AFSGAEIA++LAR + A T RP +PR IP GG R VPLD+ +R R + A + R +L G +PGEI +ALRLD DS D PPHV VSD V ++E R R++A R E+ A D G + D +I+CTG RP L+FLP++V +EY+P D+ QP++L + +P L+FVGMYRGPY GV+ELQARW + V P L + +R R PRPQFP + ++ + + + G++P
Sbjct: 45 GSVWPELTTNISRFTCSLSDYPWPAGTPEFPRSAAVAEYLKSYARDFDADRAIRFGCRVTGVERVS-GRWRVAFSEG--------GCARAEVFDALVVATGFFGRPVFP---RVSGGFD----GLSIHSGAYRGPAEFRGRRVVVVGMAFSGAEIAAELARDGAAVTAVTPRPFWLVPRRIPLGGGRR--------------------------------------VPLDLYGNTRSARLGPPGAVAPPPAERYRRRNQMLSAIGMNPGEIDEALRLDPDSTD--PPHVVVSDT----VGTEVVEGRLRVVAGRVRRLERSAVVLDDGRRVDADAVIWCTGYRPDLTFLPRTVSRAVEYDPTDIFQPVLLADAVFPQEIPGLSFVGMYRGPYFGVVELQARWVCAVMASAVPSPAPLERARGVGTARETRLARPRPQFPHNDLEQADRIGRILGVLP 441
BLAST of mRNA_H-elongata_contig10945.766.1 vs. uniprot
Match: A0A813EY66_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EY66_POLGL) HSP 1 Score: 264 bits (675), Expect = 2.590e-78 Identity = 178/461 (38.61%), Postives = 236/461 (51.19%), Query Frame = 1
Query: 1 SGGRVWNSLKTNLSKHTCCFSDFRWPEDAPLFPSGAQIRQYIEDYATTFDLRRFVRFGHVVTSVS--RSSTGAWYVEFMKSVTPEVGREGDRHTEVFDRCIVASGIFSEPYFPPPSKVQGIVDAVQTGWATHSAAYRDPSFSAGKTVLVVGCAFSGAEIASDLARTASRCLASTGRPSLFLPRLIPKTGGDRGARADDRESHPPSPGGEGGGRNVNIGDGCGCKKSSQPLVPLDIALYSRKGRAEFKASPASSEEKVGAVR-QFLLQLSGRDPGEIHDALRLDGDSDDVRPPHVAVSDEFLDRVRDGLIEVRP-RLIAVDAREKKARFADGTIEEVDHIIFCTGLRPRLSFLPQSVLHQLEYEPDDLLQPLILEHQTWKACLPDLAFVGMYRGPYLGVMELQARWATRMWGGLVDPPPALASDAALEESRIVRAKFPRPQFPT-DYVDMMEALAMVAGLIP 1368
S G+VW SL+TNLSK TC FSDF WPE AP FP +++ Y+E YA DL R++RF V SV G W V + + + + TE FD +VA+GIFSEP V G+ TG H+A+YR+PS AG+ VLVVG AFSG ++A+DL A+ ++ RP ++PR I GR P D+ YSR A+++ S+EE+ +R +F L ++G P + GD P VA+SD FLD R L++VRP ++ D A FA G+ EE D +I TG R L F S L +E++ DLLQP IL LP LAFVG+YRGPY MELQAR+A ++ G + P A L E R +RAK PRPQFP DYV M ++LA + G+ P
Sbjct: 49 SFGKVWKSLRTNLSKFTCSFSDFPWPEQAPDFPGSGEVQAYLEKYARQHDLLRYMRFQARVISVEPVEGGAGGWNVTWQEGAS-------ETKTERFDFVVVATGIFSEPCL---DAVPGL--GAFTGQVIHAASYREPSQFAGQRVLVVGAAFSGTDVAADLVGAAATVTVASRRPLWYIPRYI-------------------------SGR------------------PADLVFYSR---AKWEKGRHSTEEEANLLRHKFFLSIAGDLPEPLQTPNPDRGDL-----PFVAISDAFLDAARKKLVKVRPSEVVGFDGAA--AIFACGSREEFDAVIVATGYRLSLPFFSSSTLQTMEFDSTDLLQPAILHSCILHPGLPGLAFVGIYRGPYFATMELQARYALGLFSGRLQQPTPEVFSAGLAEERQIRAKRPRPQFPHGDYVGMTDSLAKLVGVHP 444
BLAST of mRNA_H-elongata_contig10945.766.1 vs. uniprot
Match: A0A7S4PXJ1_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PXJ1_9DINO) HSP 1 Score: 257 bits (656), Expect = 1.420e-75 Identity = 175/476 (36.76%), Postives = 235/476 (49.37%), Query Frame = 1
Query: 7 GRVWNSLKTNLSKHTCCFSDFRWPEDAPLFPSGAQIRQYIEDYATTFDLRRFVRFGHVVTSVSRSSTGA-WYVEFMKSVTPEVGREGDRHTEVFDRCIVASGIFSEPYFPPPSKVQGIVDAVQTGWATHSAAYRDPSFSAGKTVLVVGCAFSGAEIASDLARTASRCLASTGRPSLFLPRLIPKTGGDRGARADDRESHPPSPGGEGGGRNVNIGDGCGCKKSSQPLVPLDIALYSRKGRAEFKASPASSEEKVGAVRQFLLQLSGRDPGEIHDALRLDGDSDDVRPPHVAVSDEFLDRVRDGLIEVRPRLIAVDA-REKKARFADGTIEEVDHIIFCTGLRPRLSFLPQSVLHQLEYEPDDLLQPLILEHQTWKACLPDLAFVGMYRGPYLGVMELQARWATRMWGGLVDPPPALASDAALEESRIVRAKFPRPQFPT-DYVDMMEALAMVAGLIPSSSPVTQSKSKIPAARDGP 1425
G+VW +L+TNLSK+TC FSD WP AP FP+G++++ Y+E YA L R RF VT++ R GA W+V + + +G +E F +VASGIF+ P+ P ++QG + G TH+ YR+P+ AG+ VLVVG AFSGA+IA+DLA A+ + RP +LPR I P D+ YSR A + AS E++ ++F L G+ P + D + P V ++D FLD +R G VR R+ V+ R F+DGT E+ D +I TG R L FLP LE P+D LQP IL W L LAFVG+YRGPY MELQARW ++ G + P A LE R +R + PRPQFP DYV M+EALA G+ P ++ P DGP
Sbjct: 48 GKVWKALRTNLSKYTCAFSDGPWPPSAPDFPAGSEVQGYLEGYAARHGLLRCARFRSEVTALQRLPDGAGWHVTWSE--------QGGSCSEAFGGVVVASGIFARPHCP---ELQGAEEF--RGRVTHACEYREPTPFAGRRVLVVGAAFSGADIAADLAGAAASVTIACRRPLWYLPRYINSR-------------------------------------------PADLVFYSRAASARTRG--ASEEDRNLQRQRFFAGLVGQLPEPL-----AAPDPERGELPFVTITDSFLDSLRAGT--VRARVAGVEHFRGSSVVFSDGTSEDFDDVILATGYRLELPFLPPEARDALELRPEDGLQPAILHEAVWPRGLAGLAFVGLYRGPYFAAMELQARWVCGVFSGRLPAPAPEELAAGLEVERQIREQRPRPQFPHGDYVGMVEALAQRVGVHPGEILGEEAHPLRPLLVDGP 458
BLAST of mRNA_H-elongata_contig10945.766.1 vs. uniprot
Match: R1BSZ2_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BSZ2_EMIHU) HSP 1 Score: 234 bits (597), Expect = 5.660e-67 Identity = 163/456 (35.75%), Postives = 212/456 (46.49%), Query Frame = 1
Query: 7 GRVWNSLKTNLSKHTCCFSDFRWPEDAPLFPSGAQIRQYIEDYATTFDLRRFVRFGHVVTSVSRSSTGAWYVEFMKSVTPEVGREGDRHTEVFDRCIVASGIFSEPYFPPPSKVQGIVDAVQTGWATHSAAYRDPSFSAGKTVLVVGCAFSGAEIASDLARTASRC--LASTGRPSLFLPRLIPKTGGDRGARADDRESHPPSPGGEGGGRNVNIGDGCGCKKSSQPLVPLDIALYSRKGRAEFKASPASSEEKVGAVRQFLLQLSGRDPGEIHDALRLDGDSDDVRPPHVAVSDEFLDRVRDGLIEVRPRLIAVDAREKKARFADGTIEEVDHIIFCTGLRPRLSFLPQSVLHQLEYEPDDLLQPLILEHQTWKACLPDLAFVGMYRGPYLGVMELQARWATRMWGGLVDPPPALASDAALEESRIVRAKFPRPQFPTDYVDMMEALAMVAGLIP 1368
G+VW SL+TNLSKHTC FSDF WP A FP + Y+E YA TF L + G VT V R+S G Y V + G E F+ I+A+G+FS P+ P +++ G + V H++ YRD S AG+ LV+G AFSGA+ A+ +AR A +AS P +LPRL+ D R P+D+ALYSR GR E SP + R P VA++DE V GL+ V+ + R F DG E D I+ TG R ++FL ++ +EY+ DD LQPLI W A P+LAFVGMYRGPY GV+ELQARWA ++ G + P A L R +R PRPQFP DY M + LA G +P
Sbjct: 52 GKVWQSLRTNLSKHTCAFSDFPWPSTADDFPHAEDVADYLERYARTFGLHACIELGARVTLVQRASFGRGYC------VRWVSQGGTEQAETFEFAIIAAGVFSAPHVP--AELHGFQNQV-----VHASQYRDSSDFAGRRCLVLGAAFSGADAAASIARVAESVTLVASGTAPLYYLPRLV-----------DGR--------------------------------PIDLALYSR-GRLEGLPSPRTD-----------------------------------RKPRVAITDELSRAVSAGLLSVQTARVRACERGW-VTFEDGRRAEFDVILAATGYRTAVNFLAPALSEAVEYDADDWLQPLIAHECVWPAA-PNLAFVGMYRGPYFGVLELQARWACGVFAGRLPMPSAGELADGLARERAIRQMDPRPQFPHDYPTMADDLARHVGALP 413
BLAST of mRNA_H-elongata_contig10945.766.1 vs. uniprot
Match: I3TXE4_TISMK (Dimethylaniline monooxygenase [N-oxide-forming] 5 n=6 Tax=Tistrella TaxID=171436 RepID=I3TXE4_TISMK) HSP 1 Score: 231 bits (588), Expect = 3.370e-65 Identity = 165/456 (36.18%), Postives = 224/456 (49.12%), Query Frame = 1
Query: 7 GRVWNSLKTNLSKHTCCFSDFRWPEDAPLFPSGAQIRQYIEDYATTFDLRRFVRFGHVVTSVSRSSTGAWYVEFMKSVTPEVGREGDRHTEVFDRCIVASGIFSEPYFPPPSKVQGIVDAVQTGWATHSAAYRDPSFSAGKTVLVVGCAFSGAEIASDLARTASRCLASTGRPSLFLPRLIPKTGGDRGARADDRESHPPSPGGEGGGRNVNIGDGCGCKKSSQPLVPLDIALYSRKGRAEFKASPASSEEKVGAVRQFLLQLSGRDPGEIHDALRLDGDSDDVRPPHVAVSDEFLDRVRDGLIEVRPRLIAVDAREKKARFADGTIEEVDHIIFC-TGLRPRLSFLPQSVLHQLEYEPDDLLQPLILEHQTWKACLPDLAFVGMYRGPYLGVMELQARWATRMWGGLVDPPPALASDAALEESRIVRAKFPRPQFP-TDYVDMMEALAMVAGLIP 1368
G VWNSL+TNLS+++C FSD PLFP G ++ Y+ YA F L +R GH V +V + G + V +G T D IVASG+F+E P + G V H+AAYRDP+ AGK V V+G AFSGA+IA+++A A R + RP+ ++PR +P E G + GD + +P+D+ + SR RA+ A A G R L D +H L D DD+ P V +SD VR G +E+ AVD + +G E ++ C TG RP L+ L +L + Y+P D LQP++L H + +PDLAFVGMYRGPY GVMELQARWA + G + P L + A+ R +R PRPQFP DY M +ALA G++P
Sbjct: 62 GLVWNSLRTNLSRYSCVFSDHPHDRTTPLFPEGRRVAAYLAGYAARFGLDEAIRPGHRVMAVIPRTPGFRLM---------VEADGRIETHDTDAVIVASGVFAEALMPQGLTIGGAV--------MHAAAYRDPAVFAGKRVAVLGSAFSGADIAAEIAGVAERTVMLMRRPAWYVPRAVPVLP-------------------EAGFMPADAGD-----DRIRLRLPMDLVINSR-ARAQRLA--ALDGATAGRERWSWLYGIAGDQRRLHPLL--DVPEDDLAAPMV-ISDALPAAVRSGRLELAR---AVDFDPARLTLQEGGRESRFDVLICATGYRPSLAMLAPGILEAIGYDPHDRLQPVLLGHCVFPEGVPDLAFVGMYRGPYFGVMELQARWAAAVLAGKLPRPDPLDLERAVAAERTIRDVRPRPQFPHADYPAMCDALAEKLGVMP 467
BLAST of mRNA_H-elongata_contig10945.766.1 vs. uniprot
Match: UPI00166E4B1B (NAD(P)-binding domain-containing protein n=1 Tax=Tistrella bauzanensis TaxID=657419 RepID=UPI00166E4B1B) HSP 1 Score: 230 bits (587), Expect = 3.410e-65 Identity = 161/464 (34.70%), Postives = 234/464 (50.43%), Query Frame = 1
Query: 7 GRVWNSLKTNLSKHTCCFSDFRWPEDAPLFPSGAQIRQYIEDYATTFDLRRFVRFGHVVTSVSRSSTGAWYVEFMKSVTPEVGREGDRHTEVF-DRCIVASGIFSEPYFPPPSKVQGIVDAVQTGWATHSAAYRDPSFSAGKTVLVVGCAFSGAEIASDLARTASRCLASTGRPSLFLPRLIPKTGGDRGARADDRESHPPSPGGEGGGRNVNIGDGCGCKKSSQPLVPLDIALYSRKGRAEFKA-SPASSEEKVGAVRQFLLQLSGRDPGEIHDALRLDGDSDDVRPPHVAVSDEFLDRVRDGLIEVRPRLIAVDAREKKARFADGTIE-EVDHIIFCTGLRPRLSFLPQSVLHQLEYEPDDLLQPLILEHQTWKACLPDLAFVGMYRGPYLGVMELQARWATRMWGGLVDPPPALASDAALEESRIVRAKFPRPQFP-TDYVDMMEALAMVAGLIPSSSPVT 1386
G VW SLKTNLS++TC FSD D+ LFPS A++ Y+ YA DL +R GH V +V+R+ G W + + G R E D IVASG+F++ PP G+ A G +H+A+YR P AG+ V+VVG AFSGA+IA++++ A+ + RP+ ++PRL+P +A ++P P + +D+ + +R A + SPA + A R L+ D G +H L++ DD R + +SD D +R G + V + A ++ DG + VD +I+ TG PRL LP + + Y+PDD LQP++L + + +AFVGMYRGPY GVMELQARWA + G + P A + A+ R +R + PRPQFP DY DM +ALA ++P T
Sbjct: 46 GLVWRSLKTNLSRYTCGFSDHPHDPDSGLFPSAARMAAYLHGYARAHDLTGRIRHGHRVVAVTRAGAG-WRL---------IADAGGRMVEYLADGVIVASGVFAQAALPP-----GVTVAAD-GHISHAASYRGPEGFAGRRVVVVGGAFSGADIAAEISGCAADTVMLIRRPAWYVPRLVPVP------QAMMNHTNPAQP----------------PPRLXXXXXXMDLVVNARAEAARVRGLSPAV----IAAERHAWLRDIVGDQGLLHPLLQV---PDDGRLAPMVISDAVPDAIRSGRLRV---MTAAQFDARRMVLHDGRHDLPVDDVIYATGYAPRLEMLPADIRAAVGYDPDDRLQPVLLAQTVFPDGISGVAFVGMYRGPYFGVMELQARWAAGVLSGRLPAPDRPAMERAMAVERAIRDQRPRPQFPHADYPDMCDALAARLDVMPDLEQTT 461
BLAST of mRNA_H-elongata_contig10945.766.1 vs. uniprot
Match: A0A812MNS4_9DINO (FMO5 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812MNS4_9DINO) HSP 1 Score: 227 bits (578), Expect = 4.020e-64 Identity = 171/462 (37.01%), Postives = 227/462 (49.13%), Query Frame = 1
Query: 1 SGGRVWNSLKTNLSKHTCCFSDFRWPEDAPLFPSGAQIRQYIEDYATTFDLRRFVRFGHVVTSVSRSSTG---AWYVEFMKSVTPEVGREGDRHTEVFDRCIVASGIFSEPYFPPPSKVQGIVDAVQT--GWATHSAAYRDPSFSAGKTVLVVGCAFSGAEIASDLARTASRCLASTGRPSLFLPRLIPKTGGDRGARADDRESHPPSPGGEGGGRNVNIGDGCGCKKSSQPLVPLDIALYSRKGRAEFKASPASSEEKVGAVRQFLLQLSGRDPGEIHDALRLDGDSDDVRPPHVAVSDEFLDRVRDGLIEVRPRLIAVDAREKKARFADGTIEEVDHIIFCTGLRPRLSFLPQSVLHQLEYEPDDLLQPLILEHQTWKAC-LPDLAFVGMYRGPYLGVMELQARWATRMWGGLVDPPPALASDAALEESRIVRAKFPRPQFPTDYVDMMEALAMVAGLIP 1368
S G+VW+SL+TNLSK+TC FSDF WPE+A FP ++ +Y+E +A + L+ + VTSVSR G W + + E G +H F +VASGIF + + P ++T G H+A YR P AGK VLVVG AFSGA+IA DL+ AS +A G+P ++PR + +G VP D+A YSRK + K +P EE QFL L+ ++ +AL SD RPP V +SD F D VR G + V + V FADG EE + ++ TG L FL + + E D L QPLIL H TW P LAFVG+YRGPY V+ELQARWA ++ G + P +L+ + +RA RPQFP YVDM E LA + G+ P
Sbjct: 57 SEGKVWDSLRTNLSKYTCAFSDFPWPEEAETFPKAREVCRYLERFAES--LQPHLHLHCEVTSVSRGQDGETSGWQLAWR-----EAGEPKQQH---FRHLVVASGIFEKAHLQLPG--------LETFPGLLRHAADYRKPEEFAGKKVLVVGSAFSGADIAVDLSSCASVTVAG-GKPMWYIPRYV---------------------------------NG----------VPADLAFYSRKPKP--KQTP---EESNRQRHQFLSGLA-----QMPEALTAP--SDWTRPPFVCISDHFADAVRTGAVSVAGTVSNVTG--STVHFADGRSEEFEALLVATGYDLDLPFLVPELKKAVHLERDQL-QPLILSHCTWPPEEFPGLAFVGIYRGPYFAVLELQARWACGVFSGRLRAPTEEERRESLDRAWALRAGEDRPQFPQSYVDMAEELADLVGVHP 441
BLAST of mRNA_H-elongata_contig10945.766.1 vs. uniprot
Match: A0A212JHN2_9PROT (Uncharacterized protein n=1 Tax=uncultured Alphaproteobacteria bacterium TaxID=91750 RepID=A0A212JHN2_9PROT) HSP 1 Score: 225 bits (574), Expect = 1.300e-63 Identity = 150/470 (31.91%), Postives = 218/470 (46.38%), Query Frame = 1
Query: 4 GGRVWNSL-KTNLSKHTCCFSDFRWPEDAPLFPSGAQIRQYIEDYATTFDLRRFVRFGHVVTSVSRSSTGAWYVEFMKSVTPEVGREGDRHTEVFDRCIVASGIFSEPYFPPPSKVQGIVDAVQTGWATHSAAYRDPSFSAGKTVLVVGCAFSGAEIASDLARTASRCLASTGRPSLFLPRLIPKTGGDRGARADDRESHPPSPGGEGGGRNVNIGDGCGCKKSSQPLVPLDIALYSRKGRAEFKASPASSEEKVGAVRQFLLQLSGRDPGEIHDALRLDGDSDDVRPPHVAVSDEFLDRVRDG-LIEVRPRLIAVDAREKKARFADGTIEEVDHIIFCTGLRPRLSFLPQSVLHQLEYEPDDLLQPLILEHQTWKACLPDLAFVGMYRGPYLGVMELQARWATRMWGGLVDPPPALASDAALEESRIVRAKFPRPQFPT-DYVDMMEALAMVAGLIPSSSPVTQSKSKI 1404
G W+S +TNLSK +C FSDF WP+ +FP + Y++ YA F L R R V +V+ + W V + + G R T FD +VA+G+FS P+ P + + +S +F+ K VL+VG AFSG EIA ++ A + + P F+PR + G PL P D+ Y+R+ P R +L ++ G DPG + L D S + P V SD+FL V DG ++ R R A D +K ++DGT +++D ++ CTG L FL +L +E++P D LQP++L HQ + LP LAFVG YRGPY VMELQ+RW R+ G PP A +E R++R + PRPQFP DYV + + A G+ P + V +++
Sbjct: 44 GRGAWSSYARTNLSKFSCVFSDFTWPQRTDVFPMRRSVIDYLKAYAAEFRLARCFRMNTRVETVAPAGPHRWRVTTLAN--------GRRETREFDWVVVATGVFSRPFVPDFDGLPSFQGKIYHAADCYSEEVNRANFT-DKRVLIVGAAFSGTEIAGQISGFAKKTVVGLRNPMWFVPRWVKPWSG-------------------------------------APLFPADLVFYTRQPDNPMNLRP----------RTYLKEMGG-DPGLVCRDLAFD--SLETAPMTVVTSDDFLALVGDGKVVAKRSRAFAFD--DKGVLYSDGTRDDLDAVVMCTGYSSALPFLSPEILAAVEFDPRDQLQPVLLHHQVFHPDLPGLAFVGYYRGPYFPVMELQSRWVARIAAGETAPPSLAEMRAGVEIERVIRNRRPRPQFPHGDYVRLADGFAREVGVFPEGADVADMAARL 452 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10945.766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10945.766.1 >prot_H-elongata_contig10945.766.1 ID=prot_H-elongata_contig10945.766.1|Name=mRNA_H-elongata_contig10945.766.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=556bp SGGRVWNSLKTNLSKHTCCFSDFRWPEDAPLFPSGAQIRQYIEDYATTFDback to top mRNA from alignment at H-elongata_contig10945:165..5696- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10945.766.1 ID=mRNA_H-elongata_contig10945.766.1|Name=mRNA_H-elongata_contig10945.766.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5532bp|location=Sequence derived from alignment at H-elongata_contig10945:165..5696- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10945:165..5696- >mRNA_H-elongata_contig10945.766.1 ID=mRNA_H-elongata_contig10945.766.1|Name=mRNA_H-elongata_contig10945.766.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3336bp|location=Sequence derived from alignment at H-elongata_contig10945:165..5696- (Himanthalia elongata Himel1 dioecious)back to top |