mRNA_H-elongata_contig10833.680.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10833.680.1
Unique NamemRNA_H-elongata_contig10833.680.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: A0A6H5KZ63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ63_9PHAE)

HSP 1 Score: 369 bits (948), Expect = 8.450e-120
Identity = 176/204 (86.27%), Postives = 185/204 (90.69%), Query Frame = 1
Query:    1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEPATEKVRRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFETGAPKGSFRRQDGAQIKKTSANAGVGRGKPAKFK 612
            VEGIPWTCDE DVREFFKGCGKIT VRMPRWQDSGRPRGYAHVAFAG SGA+AAFG DGQYL GRYLT+Q PQEPATEK RRANR AEQP GC+TVFVKNLPYD +ED V EALAGCGRI SVRLAMWNHTRKLKGFGYVEF +ERGAE CVR Q+ LS+GGRPLVVDFETGAPKGSFRRQDGAQIKKTSA+AGVG+GK  KFK
Sbjct:  133 VEGIPWTCDESDVREFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGAQAAFGRDGQYLNGRYLTVQAPQEPATEKARRANRKAEQPAGCRTVFVKNLPYDVEEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQSLSIGGRPLVVDFETGAPKGSFRRQDGAQIKKTSADAGVGKGKAPKFK 336          
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: D7FP47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP47_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 7.990e-118
Identity = 178/216 (82.41%), Postives = 186/216 (86.11%), Query Frame = 1
Query:    1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQE------------PQEPATEKVRRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFETGAPKGSFRRQDGAQIKKTSANAGVGRGKPAKFK 612
            VEGIPWTCDE DVREFFKGCGKIT VRMPRWQDSGRPRGYAHVAFAG SGARAAFG DGQYL GRYLT+Q+            PQEPATEK RRANR AEQP GC+TVFVKNLPYD DED V EALAGCGRI SVRLAMWNHTRKLKGFGYVEF +ERGAE CVR Q+ LS+GGRPLVVDFETGAPKGSFRRQDGAQIKKTSA+AGVG+GK  KFK
Sbjct:  133 VEGIPWTCDESDVREFFKGCGKITDVRMPRWQDSGRPRGYAHVAFAGSSGARAAFGRDGQYLNGRYLTVQQITVESNNHALQAPQEPATEKARRANRKAEQPTGCRTVFVKNLPYDVDEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQNLSIGGRPLVVDFETGAPKGSFRRQDGAQIKKTSADAGVGKGKAPKFK 348          
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: A0A836CEI7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI7_9STRA)

HSP 1 Score: 220 bits (561), Expect = 6.160e-61
Identity = 102/190 (53.68%), Postives = 136/190 (71.58%), Query Frame = 1
Query:    1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEPATEKVRRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFETGAPKGSFRRQDGAQIKKTS 570
            VEGIP++  E DV +FF  CG++ +VRMPR+QDSGRPRGYAHV FA  + A  AF  DG+YL+GRYL +Q+ Q P   + +    +A +P+GC+TVFVKNLPYDADE  V +A + CG +  VRLA+WN+T++ KGFGYV+F  E GA+A V  Q  + V GRP++VD+E G  KGSFR  DG + +K +
Sbjct:  234 VEGIPYSASEADVSKFFSDCGEVISVRMPRYQDSGRPRGYAHVVFASDAAAAKAFKKDGEYLQGRYLKVQQAQAPRALQAQSQAAAAPRPKGCRTVFVKNLPYDADEQMVTKAFSKCGEVAIVRLAIWNNTKQRKGFGYVDFADETGAQAAVERQANIKVAGRPVLVDYEVGRVKGSFRLADGQKYEKVA 423          
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: W7TYE4_9STRA (31 kDa chloroplastic n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYE4_9STRA)

HSP 1 Score: 198 bits (504), Expect = 8.570e-55
Identity = 100/191 (52.36%), Postives = 124/191 (64.92%), Query Frame = 1
Query:    1 VEGIPWTCDEEDVREFF--KGCGKITAVRMPRWQDSGRPRGYAHVAFAGLS-GARAAFGLDGQYLKGRYLTIQEPQEPATEKVRRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFETGAPKGSFRRQDGAQIKK 564
            VEGI +   E+D+  FF  KGCGK+  VR+PRWQDSGRPRGYAH+ F     G   A  L G  + GRYLT+Q  Q P +  V  +    ++P GC TVFVKNLPY+  ED VREA   CG+I +VRLA+W HT++ KGF YV+F  E  AE  V+ Q  + VGGR + VD+ETGAPK S+R  DG Q  K
Sbjct:   98 VEGISYEATEDDLVRFFQDKGCGKVKEVRLPRWQDSGRPRGYAHIEFKKTDEGVAKALSLSGARMMGRYLTVQRAQAPKSLGVGGSLPLKDKPPGCDTVFVKNLPYNTTEDAVREAFTFCGKIKTVRLAVWQHTQQQKGFCYVQFEKENAAEIAVKKQGAIQVGGRKVFVDYETGAPKASYRAPDGRQWSK 288          
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: A0A6G0WFD1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WFD1_9STRA)

HSP 1 Score: 191 bits (485), Expect = 5.250e-52
Identity = 91/184 (49.46%), Postives = 123/184 (66.85%), Query Frame = 1
Query:    1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEP-ATEKVRRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFETGAPKGSFRRQDG 549
            VEG+ +  DE  +   F  CG +  VR+PR+QDSGRPRGYAHV F   + A+ A  LDG+YL  RYLTI+  + P   ++ R + ++ +  +GC+TVF+K LPYD DE  V+EAL+ CG I SVRL +WNHT+KLKGFGYVEF  E  A    + +  + +G R +++D +TGAPK SFR  DG
Sbjct:   82 VEGMSYDADESALVSHFSSCGTVREVRLPRYQDSGRPRGYAHVVFDSEASAKKALALDGKYLLKRYLTIRPAETPRGMDQARSSRKNVKITKGCRTVFIKQLPYDVDEATVKEALSSCGDIVSVRLPLWNHTKKLKGFGYVEFADEASAVEATK-KSGMKIGSRMVLIDLDTGAPKASFRNTDG 264          
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: A0A2D4BXX0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXX0_PYTIN)

HSP 1 Score: 192 bits (488), Expect = 1.600e-51
Identity = 98/187 (52.41%), Postives = 126/187 (67.38%), Query Frame = 1
Query:    1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEPATEKVRRANRSAEQP--RGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFETG--APKGSFRRQDG 549
            VEGIP+  DE D+   F  CG +  VRMPR+QDSG+PRGYAHV F   S    A  LDG+YL GRYLT+++ + P T  V    + + +   +GC+TVF+K+LPYD +E  VREALA CG I SVRL +WNHT+KLKGFGYVEF SE  A A V+ +  + +G R +++  ET   APK SFR +DG
Sbjct:  153 VEGIPYKADEGDLVSHFSSCGIVKEVRMPRYQDSGKPRGYAHVVFESASSIPKALKLDGKYLFGRYLTVKQAERPRTLDVALQEQKSVKKAVKGCRTVFIKHLPYDVEEAAVREALASCGTILSVRLPLWNHTKKLKGFGYVEFSSEDEAIAAVK-RSGMKIGDRMVIISLETAGSAPKASFRLRDG 338          
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: A0A485L4I6_9STRA (Aste57867_15645 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4I6_9STRA)

HSP 1 Score: 189 bits (481), Expect = 2.070e-51
Identity = 89/185 (48.11%), Postives = 123/185 (66.49%), Query Frame = 1
Query:    1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEPA--TEKVRRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFETGAPKGSFRRQDG 549
            VEGI +  DE  +   F  CG +  VR+PRW DSG+PRGY HV F   + A+ A  LDG+Y+  RYLTI++ + P      V+   +SA+  +GC+TV++K LPY+ +ED V++ALA CG I SVRL MW HT+KLKGFGYVEF  E GA    + +  + +G R +++D +TGAPK SFR+ +G
Sbjct:   80 VEGISYDADESALVTHFSSCGHVKEVRLPRWHDSGKPRGYGHVVFETEAAAKKALALDGKYMLKRYLTIRQAEAPRGIERAVQNRKQSAKPTKGCRTVYIKQLPYEVEEDTVKQALASCGEILSVRLPMWGHTKKLKGFGYVEFADEAGAVKATK-RSGMKIGDRMVLIDLDTGAPKASFRQTNG 263          
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: A0A225WYL6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WYL6_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.000e-50
Identity = 96/189 (50.79%), Postives = 127/189 (67.20%), Query Frame = 1
Query:    1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEP-ATE---KVRRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFETG--APKGSFRRQDG 549
            VEGIP+  +E D+   F  CG +  VRMPR+QDSG+PRGYAHV F   +  + A  LDGQYL  RYL+I+  + P A E   K +  N + +  +GC+TVF+K LPY+ +ED +REALA CG ITSVRL +WNHT+KLKGFGYVEF SE  A A  R +  + +G R +++  +    APK SFR++DG
Sbjct:   67 VEGIPYRANEGDLVTHFSSCGTVREVRMPRYQDSGKPRGYAHVVFDDEAALKKALKLDGQYLFNRYLSIRRAEAPRAVEMALKEKNQNTNKKAVKGCRTVFIKQLPYEVEEDAIREALASCGTITSVRLPIWNHTKKLKGFGYVEFSSEDEALAAAR-RSGMKIGDRMVLISLDAAGSAPKASFRQRDG 254          
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: K3WSU1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU1_GLOUD)

HSP 1 Score: 187 bits (475), Expect = 7.270e-50
Identity = 98/192 (51.04%), Postives = 123/192 (64.06%), Query Frame = 1
Query:    1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEPATEKV--RRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFET-GAPKGSFRRQDGAQIKKT 567
            VEGIP+  DE DV   F  CG +  VRMPR+QDSGRPRGYAHV F        A  LDG+YL  RYL++   Q P T ++  +      +   GC+TVFVK LPYD +E  +R+ALA CG I SVRL +WNHT+KLKGFGYVEF  E  A A V+ +  + VGGR ++++ +  GAPK SFR+ DG    KT
Sbjct:  143 VEGIPYQADEGDVVSHFSVCGIVKEVRMPRYQDSGRPRGYAHVVFESEKAIPKALALDGKYLFKRYLSVSRAQTPRTLELALKETKNVKKAVVGCKTVFVKQLPYDIEEQALRDALASCGTIMSVRLPIWNHTKKLKGFGYVEFSKEEEAVAAVK-RSGMKVGGRMVIINLDVAGAPKASFRQTDGQYWNKT 333          
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Match: A0A662XMP9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XMP9_9STRA)

HSP 1 Score: 187 bits (474), Expect = 7.390e-50
Identity = 94/189 (49.74%), Postives = 124/189 (65.61%), Query Frame = 1
Query:    1 VEGIPWTCDEEDVREFFKGCGKITAVRMPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEPATE----KVRRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAMWNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFET--GAPKGSFRRQDG 549
            VEGIP+  DE D+   F  CG +  VRMPR+QDSG+PRGYAHV F   +    A  LDG+YL  RYL+++  + P +     K +  N + +  +GC+TVF+K LPYD +ED VR ALA CG +TSVRL  WNHT+KLKGFGYVEF SE  A A  R +  + +G R +++  +   GAPK SFR++DG
Sbjct:  128 VEGIPYRADEGDLVTHFSSCGAVREVRMPRYQDSGKPRGYAHVVFEDEAALEKALKLDGKYLFSRYLSVRRAEAPRSAELALKEQSQNATKKAVKGCRTVFIKQLPYDVEEDAVRAALASCGTVTSVRLPFWNHTKKLKGFGYVEFSSEDEALAASR-RSGMKIGDRMVLISLDVAGGAPKASFRQRDG 315          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10833.680.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZ63_9PHAE8.450e-12086.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP47_ECTSI7.990e-11882.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CEI7_9STRA6.160e-6153.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TYE4_9STRA8.570e-5552.3631 kDa chloroplastic n=2 Tax=Monodopsidaceae TaxID... [more]
A0A6G0WFD1_9STRA5.250e-5249.46Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A2D4BXX0_PYTIN1.600e-5152.41Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A485L4I6_9STRA2.070e-5148.11Aste57867_15645 protein n=1 Tax=Aphanomyces stella... [more]
A0A225WYL6_9STRA1.000e-5050.79Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
K3WSU1_GLOUD7.270e-5051.04Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A662XMP9_9STRA7.390e-5049.74Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10833contigH-elongata_contig10833:5044..7940 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score309.7
Seed ortholog evalue9.1e-82
Seed eggNOG ortholog2880.D7FP47
KEGG koko:K11294
KEGG Pathwayko05130,map05130
EggNOG free text desc.rRNA processing
EggNOG OGsKOG4210@1,KOG4210@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNucleotide-binding alpha-beta plait domain
Ec32 orthologEc-10_002460.1
Exons4
Model size1991
Cds size546
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10833.680.1prot_H-elongata_contig10833.680.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10833 6424..7859 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929611.8316574-UTR-H-elongata_contig10833:5043..53511622929611.8316574-UTR-H-elongata_contig10833:5043..5351Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10833 5044..5351 -
1691679091.051767-UTR-H-elongata_contig10833:5043..53511691679091.051767-UTR-H-elongata_contig10833:5043..5351Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10833 5044..5351 -
1622929611.8442245-UTR-H-elongata_contig10833:5367..64231622929611.8442245-UTR-H-elongata_contig10833:5367..6423Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10833 5368..6423 -
1691679091.0641618-UTR-H-elongata_contig10833:5367..64231691679091.0641618-UTR-H-elongata_contig10833:5367..6423Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10833 5368..6423 -
1622929611.8904688-UTR-H-elongata_contig10833:7859..79401622929611.8904688-UTR-H-elongata_contig10833:7859..7940Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10833 7860..7940 -
1691679091.1007173-UTR-H-elongata_contig10833:7859..79401691679091.1007173-UTR-H-elongata_contig10833:7859..7940Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10833 7860..7940 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929611.857558-CDS-H-elongata_contig10833:6423..66451622929611.857558-CDS-H-elongata_contig10833:6423..6645Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10833 6424..6645 -
1691679091.0722463-CDS-H-elongata_contig10833:6423..66451691679091.0722463-CDS-H-elongata_contig10833:6423..6645Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10833 6424..6645 -
1622929611.8679056-CDS-H-elongata_contig10833:6913..71081622929611.8679056-CDS-H-elongata_contig10833:6913..7108Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10833 6914..7108 -
1691679091.0809-CDS-H-elongata_contig10833:6913..71081691679091.0809-CDS-H-elongata_contig10833:6913..7108Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10833 6914..7108 -
1622929611.879534-CDS-H-elongata_contig10833:7730..78591622929611.879534-CDS-H-elongata_contig10833:7730..7859Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10833 7731..7859 -
1691679091.0907648-CDS-H-elongata_contig10833:7730..78591691679091.0907648-CDS-H-elongata_contig10833:7730..7859Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10833 7731..7859 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10833.680.1

>prot_H-elongata_contig10833.680.1 ID=prot_H-elongata_contig10833.680.1|Name=mRNA_H-elongata_contig10833.680.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=182bp
MPRWQDSGRPRGYAHVAFAGLSGARAAFGLDGQYLKGRYLTIQEPQEPAT
EKVRRANRSAEQPRGCQTVFVKNLPYDADEDGVREALAGCGRITSVRLAM
WNHTRKLKGFGYVEFVSERGAEACVRMQEKLSVGGRPLVVDFETGAPKGS
FRRQDGAQIKKTSANAGVGRGKPAKFKRVRA*
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mRNA from alignment at H-elongata_contig10833:5044..7940-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10833.680.1 ID=mRNA_H-elongata_contig10833.680.1|Name=mRNA_H-elongata_contig10833.680.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2897bp|location=Sequence derived from alignment at H-elongata_contig10833:5044..7940- (Himanthalia elongata Himel1 dioecious)
GTGGAGGGTATCCCGTGGACTTGCGACGAAGAGGATGTCCGAGAATTCTT CAAGGGCTGCGGCAAGATCACGGCAGTGAGGATGCCCAGGTGGCAGGACT CTGGAAGGCCTCGCGGATATGCCCACGTGGCGTTCGCAGGGTTGAGCGGA GCGCGGGCGGCCTTCGGACTCGACGGGCAGTACCTCAAGGGGCGTTACCT TACAATCCAGGTAACGGCGGTGGAGACATCGAGTTAATGCGGCAAACTTT ATCTCGGAAGTGGACAAGAGAGGAATCTAAAAACACTTCGTGCAAAGAGT ATGTGTGTGTCCCGATTATATAGGTCATGTTGTTCTTGTCTAAGGGTTTT GTGTCCGTTCTTCAAGGATGGATGCACATGTACGGGGGCCTGCTTCGTAT GGAAAAGCGTGTTGTAACCCATTTGAATTGCATGCGACGACTGACGTAAT GTAGAGCCAGCTCCCCCGTGTCCGCGCTTTCTGGATCTCGTTGTGCGTTA TCAAGACTTCGCGTCCATGATGCCGTTGTACAGGGGAAACCAATAACGAA AATATATGTATATCTATCTATCTATATATGTTGATATATATGTTTTTATT TAAAAGACTTAGGCTCATTCTAACTCTCCGAACATCCACACCTTCTTGCA CCATAGGTGCAATCCAGGGAACCAACTATCAGAAAGCAGGAATGAGCAGG GACAATAGGAATAAGCAGGGCGAGAGAAGCAAACTAGCTGGCATGGTATC TCAAATTTATAGACGGCGCTTGTCGTCGTTGCCGATACTGTTCCGACGCC GATGTACCGCACGCTCGATCATCTACCCACAGGAACCGCAAGAGCCGGCG ACGGAAAAGGTCAGGCGAGCGAACCGCTCGGCGGAGCAACCGCGGGGATG TCAGACGGTTTTCGTAAAGAACTTGCCGTACGACGCGGACGAAGACGGGG TGCGCGAAGCGCTTGCCGGCTGCGGACGCATAACCTCTGTACGCCTGGCA ATGTGGAATCACACGCGGAAGCTCAAGGTGACCACGAGACACATGCTTGG TGTTTTTGCTGTAGAAAAGTCCTGGGCTCCTCCTCTCGTTCTCCCCCCCC CAACAGAGACTCGTTCGTGTAAATGTCAATCCTTGGCCCACTAAGCGCGA TGCCATCCCCCGCAGCCGACAAGTGTCCCGATGCCAACATGAGCGCACAC GGCTTTGCTTCACGTGTTTTCCAGCCCCCGCGCGGATGACACACATCAAT ATAAAATTTAACGTTTGGTATAAACGCGATTGCTGTGCTTCACAGGGATT TGGGTACGTGGAGTTTGTCAGCGAGAGGGGCGCCGAGGCTTGCGTTCGAA TGCAGGAGAAGCTGTCGGTTGGCGGCAGGCCTCTGGTGGTGGACTTCGAG ACGGGCGCACCAAAAGGGTCTTTCCGTAGGCAGGACGGAGCGCAGATCAA AAAAACGTCCGCCAACGCGGGGGTGGGGAGGGGAAAGCCGGCCAAGTTTA AAAGGGTTCGTGCTTGAGGATTTCCCGGAGCCGTACACGCCAACGCGTAG AAGGAGGTATTCCTGGTGAGGTGTCGAGCCGGAGAATCACCCCTCCGCAT TTTGCTGGAGATGCGCGCGCTCAGTTTCTGCGGAACGCATACTTGGGTTG CCCGGGACAACCAGGTCGTCGACGGCGGAGTCGATGCCGCAGCACGAATA CATGACGTGCTCCTGTGATGATCTGTGGTGTCTTATATCTTGATTACGTT TGGATGGATGCCAATGTCGGAGTACACAAAAAAACTCCGCGCCCTTGCTT TCCCAGCTGATGTCGTAAAGCAGCGCCCAATGTTTGAGGGGAGGAATCGG TGAGTAAATGCCAACCTTGCGTGGAAAGCGCGCGCGCCCGGCTTTTCTTT CAGAGAAACCCTCCTTCCCACACTCTCCGTGCCTGTCCTACCGCCGCTTT CCTCTTGCGGAAACCCCAACTGCGCCAGGCGTCCCGTCTCCCCGTCGACC GACAGGGTGCCATTGTCTGAGCGCCAGCACGTTCATCCCCATACCTCTGC CCAGTTCGACGAGTATCGTCTGTATCGCCGCCGCCTGTGCAGTCGCCGCT GTCTTCCTCCCTTTAGTTTTCCCCGTTTATTTGCCCCCGCTACGTAGTCG TAGTCGAAGCTTTTGTCTAAACCCTAGCCACCAGAGGGAAATAACAAAGG AGTTCTAGTGGTGGTGGCGGTAACGGCCCGGGCTTTGCCTTCTCTTGCAC GGTGTTTTTTTTTCCTTCGCGTGAGCTATGATTAACTTGCTGATAGCGTC GGCGTTACATATGCTTTCAGGAGATGTCTTAAAACTATATCCAGCACGTC AAGCGGGGCTTCTTCTTTTTACTCCCCTGCCTGTAGGTATCGGACGGTAA TCAACCATACAATCAACACAACGGTCTCCCTTTTTTTAACGCCAAGGATA TTGAACCGCCATCCTAACACATACGTGTGCTGCAGGAATAGCCCCGTGTG GTAAGTTGGAGTGTTAGGCGACAGAAAAGATGGCTAGCAGTTGGTCAAAC GAGGGAGAAGGGTCGAATACACGGCATACACAAGAAAAGAGGTGTGTCAA GGTCAACCCCACGCACCCCATGCGCACAACGATTATATGAGAAACGCAAA CGAACCGTTCGTGGCCGCTTGCCCTAGATAACTTCACAACGTGTGGCTGT ATCAGCGCCGTTGGGTCAGCACTTCCAACGGTTTAGCCACGTAAACATGA AGCTCATCAAAACTCGATCATGCTTAAGGCCACGTCGCCTTAGGGGACGT TTTATGTCGTGCGATTAATCTGGCCAGCTACACTGCAGGTGAGACGACGT TGGTCACCCTTTGACACCGTGTTGAGCACAACGATACCTCTCACGCC
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Coding sequence (CDS) from alignment at H-elongata_contig10833:5044..7940-

>mRNA_H-elongata_contig10833.680.1 ID=mRNA_H-elongata_contig10833.680.1|Name=mRNA_H-elongata_contig10833.680.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1092bp|location=Sequence derived from alignment at H-elongata_contig10833:5044..7940- (Himanthalia elongata Himel1 dioecious)
ATGCCCAGGTGGCAGGACTCTGGAAGGCCTCGCGGATATGCCCACGTGGC
GTTCGCAGGGTTGAGCGGAGCGCGGGCGGCCTTCGGACTCGACGGGCAGT
ACCTCAAGGGGCGTTACCTTACAATCCAGATGCCCAGGTGGCAGGACTCT
GGAAGGCCTCGCGGATATGCCCACGTGGCGTTCGCAGGGTTGAGCGGAGC
GCGGGCGGCCTTCGGACTCGACGGGCAGTACCTCAAGGGGCGTTACCTTA
CAATCCAGGAACCGCAAGAGCCGGCGACGGAAAAGGTCAGGCGAGCGAAC
CGCTCGGCGGAGCAACCGCGGGGATGTCAGACGGTTTTCGTAAAGAACTT
GCCGTACGACGCGGACGAAGACGGGGTGCGCGAAGCGCTTGCCGGCTGCG
GACGCATAACCTCTGTACGCCTGGCAATGTGGAATCACACGCGGAAGCTC
AAGGAACCGCAAGAGCCGGCGACGGAAAAGGTCAGGCGAGCGAACCGCTC
GGCGGAGCAACCGCGGGGATGTCAGACGGTTTTCGTAAAGAACTTGCCGT
ACGACGCGGACGAAGACGGGGTGCGCGAAGCGCTTGCCGGCTGCGGACGC
ATAACCTCTGTACGCCTGGCAATGTGGAATCACACGCGGAAGCTCAAGGG
ATTTGGGTACGTGGAGTTTGTCAGCGAGAGGGGCGCCGAGGCTTGCGTTC
GAATGCAGGAGAAGCTGTCGGTTGGCGGCAGGCCTCTGGTGGTGGACTTC
GAGACGGGCGCACCAAAAGGGTCTTTCCGTAGGCAGGACGGAGCGCAGAT
CAAAAAAACGTCCGCCAACGCGGGGGTGGGGAGGGGAAAGCCGGCCAAGT
TTAAAAGGGTTCGTGCTTGAGGATTTGGGTACGTGGAGTTTGTCAGCGAG
AGGGGCGCCGAGGCTTGCGTTCGAATGCAGGAGAAGCTGTCGGTTGGCGG
CAGGCCTCTGGTGGTGGACTTCGAGACGGGCGCACCAAAAGGGTCTTTCC
GTAGGCAGGACGGAGCGCAGATCAAAAAAACGTCCGCCAACGCGGGGGTG
GGGAGGGGAAAGCCGGCCAAGTTTAAAAGGGTTCGTGCTTGA
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