prot_H-elongata_contig10801.655.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10801.655.1
Unique Nameprot_H-elongata_contig10801.655.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length294
Homology
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BLAST of mRNA_H-elongata_contig10801.655.1 vs. uniprot
Match: D7FUJ6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ6_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 1.890e-6
Identity = 26/40 (65.00%), Postives = 30/40 (75.00%), Query Frame = 0 
Query:    1 MINVVNKRCSRDGCFKLASYGVAGSKKAEYCAVHALEGMV 40
            M++VV+KRC   GC K  SYG  GSKKAE CA HAL+GMV
Sbjct:    1 MVDVVSKRCGHPGCTKRPSYGNDGSKKAELCAQHALQGMV 40
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BLAST of mRNA_H-elongata_contig10801.655.1 vs. uniprot
Match: A0A6H5JEU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEU0_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 4.900e-6
Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 0 
Query:    1 MINVVNKRCSRDGCFKLASYGVAGSKKAEYCAVHALEGM 39
            M+NV+++RC    C KLAS+G  G+KKAEYC VHA EGM
Sbjct:    1 MVNVISRRCVNSECDKLASFGCTGTKKAEYCTVHAKEGM 39
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10801.655.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUJ6_ECTSI1.890e-665.00EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JEU0_9PHAE4.900e-661.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10801contigH-elongata_contig10801:3568..4449 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10801.655.1mRNA_H-elongata_contig10801.655.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10801 2560..4522 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10801.655.1 ID=prot_H-elongata_contig10801.655.1|Name=mRNA_H-elongata_contig10801.655.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=294bp
MINVVNKRCSRDGCFKLASYGVAGSKKAEYCAVHALEGMVDVVNKRCASD
ECFKRATFGVAGSKKAEYCAVHALEGMMNVRKKRCASEGCFKQPSYSVAD
SKITEYCGVHALKGMINIKNKRCASDVCLHQSNGMASSKKAKHCAVHALE
GMVKFMNKICESDECLQYPSYGVADSKKAHYCAVHALEGMIHVYNKGCAS
DGCIKRPSYGIAGSKKYCALHPLEGMTDITIKTCDGDISAAQNQARTIKR
VPEISAREVSTLEREITTKFQRPCYNALSDAVSVKTEMSLSMS*
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