mRNA_H-elongata_contig10742.612.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig10742.612.1 vs. uniprot
Match: A0A6H5KV27_9PHAE (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV27_9PHAE) HSP 1 Score: 469 bits (1206), Expect = 6.460e-149 Identity = 304/557 (54.58%), Postives = 354/557 (63.55%), Query Frame = 1
Query: 148 LLVWVPLATTEGGLVASVNRGCRAISEGGHGGA---------RAVIVDDGITRAPCIAMPDVRLALELKQWVEREKGPDAGFPVLVEAFQSTTRHGRLSSVTASMAGRHVYLRFKCTTGDAMGMNMVSKGCEAAVKEIQRRFEQARLIALSGNTCTDKKPSALNWTAGRGKSVVVEAVLSARAVTVVLKTTVKQMVECNTAKNIVGSAMAGSIGGFNSHAANV----VAAVFLATGQDPAHTVEGSHCITLMEEVRAGEETSCGGRQGDLRVSVTLPSLPVGTVGGGTGLSGQAACLQLAGCRTTAPGHFSFGAAV-------------AELPPPS--------EVPRLAAPEGENSGRYI--------------GAIDP--GGLVRGSDAAAASGGDSYCQRTAISLVAEAAXXXXXXXXXXXAAAAISLLPGDAVGGAA--GLTRPPSGNGAVTEGIAIE------GSKGQRNEASPRTAAVEARPAPEAPKPEGGAFAASPHLPGTSARRLACIIGAAVMAGELSLLAALTSNDLVSTHMALNRKLQSSGGALA 1644
+ VW+PLATTEGGLVASVNRGC AISEGG GG R ++DDG+TRAPCIAMP++RLA EL++W ER G DAG+P+L +AFQSTT HG L+SVTASMAGRHVYLRFKCTTG+AMGMNM+SKGCEAAV+EIQ+RF+QARL+ALSGN CTDKK SA NW GRGKSVV EAVLSA+ V+ VLKTTV +MVECN +KN+VGSAMAGSIGGFNSHAANV +AVFLATGQDPAHTVEGS CITLME+V+ GEE S GGR GDLRV+VT+PSL VGTVGGGTGL Q+ACL+L GC + G A++ VP + +GEN G+ID GG SG Q TAI LVAEAA AAIS LPG A T P + G G+ + + G+ +P A ++ P G+ +A+P G ARRLAC+I A VMAGELSLLAALTSNDLV HMALNRK + GA A
Sbjct: 1 MCVWIPLATTEGGLVASVNRGCLAISEGGDGGGWRSSASGGVRTEVLDDGVTRAPCIAMPNIRLASELRRWAERRSGEDAGYPLLFDAFQSTTNHGSLTSVTASMAGRHVYLRFKCTTGNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKKASAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVDKMVECNISKNLVGSAMAGSIGGFNSHAANVRLFLSSAVFLATGQDPAHTVEGSSCITLMEKVKPGEEGSGGGRPGDLRVTVTMPSLLVGTVGGGTGLPAQSACLRLMGCGQSVEDAGGDGGVXXXXXXXXXXXXDGAQIGSQKAGVDGDAVSVPGHPSAKGENGXXXXXXXXXXXXXXXSIPGSIDEDTGGNXXXXXXXDGSGE----QPTAIGLVAEAA-------------AAISPLPGVIAAAVADEAATTPIARAGDCPVGVVADTPLPPAATPGKGKGKAPGAGARKSGXXXXXP----GSSSAAPREKG--ARRLACVIAATVMAGELSLLAALTSNDLVRAHMALNRKKGGAPGASA 534
BLAST of mRNA_H-elongata_contig10742.612.1 vs. uniprot
Match: D8LK73_ECTSI (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK73_ECTSI) HSP 1 Score: 460 bits (1183), Expect = 1.460e-146 Identity = 290/568 (51.06%), Postives = 333/568 (58.63%), Query Frame = 1
Query: 1 GSAARSAV-SEVVNGLSGLPLDGMDYSSVYGKNCENVVGFVSLPVGIAGPLLV-----WVPLATTEGGLVASVNRGCRAISEGGHGG---------ARAVIVDDGITRAPCIAMPDVRLALELKQWVEREKGPDAGFPVLVEAFQSTTRHGRLSSVTASMAGRHVYLRFKCTTGDAMGMNMVSKGCEAAVKEIQRRFEQARLIALSGNTCTDKKPSALNWTAGRGKSVVVEAVLSARAVTVVLKTTVKQMVECNTAKNIVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEETSCGG-RQGDLRVSVTLPSLPVGTVGGGTGLSGQAACLQLAGCRTTAPGHFSFGAAVAELPPPSEVPRLAAPEGENSGRYIGAIDPGGLVRGSDAAAASGGDSYCQRTAISLVAEAAXXXXXXXXXXXAAAAISLLPGDAVGGAAGLTRPPSGNGAVTEGIAIEGSKGQRNEASPRTAAVEARPAPEAPKPEGGAFAASPHLPGTSARRLACIIGAAVMAGELSLLAALTSNDLVSTHMALNRKLQSSGGALASPQG 1656
G+AA+SA +E LS LP + M YS +YGKNCENV+G+V +PVG AGPL+V W+PLATTEGGLVASVNRGC AISEGG GG AR ++DDG+TRAPCIAMP++RLA EL++W ER G DAG+P+L +AFQSTT HG L+SVTAS+AGRHVYLRFKCTTG+AMGMNM+SKGCEAAV+EIQ+RF+QARL+ALSGN CTDKK SA NW GRGKSVV EAVLSA+ V+ VLKTTV QMVECN +KN+VGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGS CITLME+V+ GEE S GG R GDLRV+VT+PSL T G S GAA PP+ P G+ G+ P+ +G ARRLAC+I A VMAGELSLLAALTSNDLV HMALNRK + GA A G
Sbjct: 153 GTAAQSAPGAEGGTVLSKLPFEDMAYSRIYGKNCENVMGYVPVPVGAAGPLIVDGEKVWIPLATTEGGLVASVNRGCLAISEGGDGGGWRSSTSGGARTEVLDDGVTRAPCIAMPNIRLASELRRWAERRSGEDAGYPLLFDAFQSTTSHGSLTSVTASLAGRHVYLRFKCTTGNAMGMNMISKGCEAAVREIQKRFKQARLVALSGNVCTDKKASAQNWVEGRGKSVVAEAVLSAKTVSSVLKTTVDQMVECNISKNLVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSSCITLMEKVKPGEEGSGGGGRPGDLRVTVTMPSLLAATT------------------PNARAGDSSVGAAAETPLPPAATP------GKGKGKAXXXXXXXXXXXXX--------------------------------------------------------------------------------------XXXXXXXXXPREKG-------------ARRLACVIAATVMAGELSLLAALTSNDLVRAHMALNRKKGGAPGASAGAVG 597
BLAST of mRNA_H-elongata_contig10742.612.1 vs. uniprot
Match: A0A835YX65_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX65_9STRA) HSP 1 Score: 361 bits (926), Expect = 1.000e-110 Identity = 200/346 (57.80%), Postives = 241/346 (69.65%), Query Frame = 1
Query: 43 LSGLPLDGMDYSSVYGKNCENVVGFVSLPVGIAGPLL-----VWVPLATTEGGLVASVNRGCRAISEGGHGGARAVIVDDGITRAPCIAMPDVRLALELKQWVEREKGPDAGFPVLVEAFQSTTRHGRLSSVTASMAGRHVYLRFKCTTGDAMGMNMVSKGCEAAVKEIQRRFEQARLIALSGNTCTDKKPSALNWTAGRGKSVVVEAVLSARAVTVVLKTTVKQMVECNTAKNIVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEETSCGGRQGDLRVSVTLPSLPVGTVGGGTGLSGQAACLQLAGCRTTAPGHFSFGAAVAEL 1065
L LP G DY+ V+G NCE V G+V LPVGI GPLL V+VP+ATTEG LVAS NRGC+AIS+GG GAR+V++ DGITRAPC+ MPD A +KQWVE A F + AF+STT GRL++VT ++AGR+VYLRF C GDAMGMNMVSKGC AAV + F + LIA+SGN CTDKKP+A+NW GRGKSVV EA + R V LKTTV+ +VE N KN++GSA+AG++GGFN+HA+NVV AVFLATGQDPA VE S C+TLMEE GDL VSV +P + VGTVGGGT L QAACL + GCR + + GA +L
Sbjct: 199 LRALPHAGYDYARVFGANCEIVCGYVPLPVGIVGPLLLDGREVYVPMATTEGCLVASTNRGCKAISQGG--GARSVVLKDGITRAPCLRMPDTIGAARVKQWVEAP----ANFARVKAAFESTTSFGRLNAVTGAVAGRNVYLRFVCAAGDAMGMNMVSKGCLAAVDLLTEAFPELELIAISGNMCTDKKPAAINWIEGRGKSVVCEARIPGRYVESTLKTTVRAIVETNVQKNLIGSALAGALGGFNAHASNVVTAVFLATGQDPAQNVEASMCMTLMEETD----------DGDLLVSVNMPCIEVGTVGGGTSLPAQAACLDVIGCRGASQAPDAPGANARQL 528
BLAST of mRNA_H-elongata_contig10742.612.1 vs. uniprot
Match: A0A7S1Y0Q7_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0Q7_9STRA) HSP 1 Score: 343 bits (879), Expect = 2.320e-105 Identity = 184/323 (56.97%), Postives = 226/323 (69.97%), Query Frame = 1
Query: 52 LPLDGMDYSSVYGKNCENVVGFVSLPVGIAGPLL-----VWVPLATTEGGLVASVNRGCRAISEGGHGGARAVIVDDGITRAPCIAMPDVRLALELKQWVEREKGPDAGFPVLVEAFQSTTRHGRLSSVTASMAGRHVYLRFKCTTGDAMGMNMVSKGCEAAVKEIQRRFEQARLIALSGNTCTDKKPSALNWTAGRGKSVVVEAVLSARAVTVVLKTTVKQMVECNTAKNIVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEETSCGGRQGDLRVSVTLPSLPVGTVGGGTGLSGQAACLQL 1005
LP+D DY ++G NCE VVG+V LP G+ GPLL V+VP+ATTEG LVAS NRGC+AI+ GGARA ++ DGITRAPCI MP A +LK WVE + F + AF STT GRL S T ++AGR+VYLR C GDAMGMNMVSKGC ++ ++ F + L+A+SGN C DKKP+A+NW GRGKSVVVEA ++A V LKTTV+ MVE N K ++GSAMAGS+GGFN+HAAN+VAA FLATGQDPA VE ++CITLME++ E G L +S T+PSL VGTVGGGT L Q ACL++
Sbjct: 78 LPVDHFDYERIFGANCEIVVGYVPLPCGVVGPLLLDGEPVYVPMATTEGCLVASTNRGCKAITA--CGGARARVLKDGITRAPCILMPSAMAAADLKAWVEEPEN----FQAIQNAFNSTTSFGRLKSCTPTIAGRNVYLRCVCFAGDAMGMNMVSKGCLKVIELLEEHFPEMELVAISGNVCCDKKPAAINWIEGRGKSVVVEATITADVVRKTLKTTVEAMVEANRQKCLIGSAMAGSVGGFNAHAANIVAAAFLATGQDPAQVVESANCITLMEKIDIPGEAEPG-----LLMSCTMPSLEVGTVGGGTSLPAQRACLEV 389
BLAST of mRNA_H-elongata_contig10742.612.1 vs. uniprot
Match: A0A5A8D6R8_CAFRO (3-hydroxy-3-methylglutaryl coenzyme A reductase n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D6R8_CAFRO) HSP 1 Score: 343 bits (881), Expect = 2.570e-104 Identity = 193/346 (55.78%), Postives = 232/346 (67.05%), Query Frame = 1
Query: 73 YSSVYGKNCENVVGFVSLPVGIAGPLLV-----WVPLATTEGGLVASVNRGCRAISEGGHGGARAVIVDDGITRAPCIAMPDVRLALELKQWVEREKGPDAGFPVLVEAFQSTTRHGRLSSVTASMAGRHVYLRFKCTTGDAMGMNMVSKGCEAAVKEIQRRFEQARLIALSGNTCTDKKPSALNWTAGRGKSVVVEAVLSARAVTVVLKTTVKQMVECNTAKNIVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEETSCGGRQGDLRVSVTLPSLPVGTVGGGTGLSGQAACLQLAGCRTTAPGHFSFGAAVAELPPPSEVPRLA 1095
Y +V G NCENV+G++ LPVG+ GP+ V VPLATTEG LVAS NRG RAIS G GAR V+ DG+TRAP + MP + A ELK WVE + F ++ EAF ST+R GRL S+ S AGR+ YLRFKC+TGDAMGMNM++KG AA+ + RF AR+++LSGN CTDKKPSA+NW GRGKSV E VLS V LKTT +VE NT KN++GSA+AGSIGGFN+HAAN+V+AVFLATGQD A VE S C+TL+E +G + SVT+PS+ VGTVGGGT LS QAACL L G R GAA L P S +LA
Sbjct: 94 YDAVDGSNCENVIGYLPLPVGVVGPMRVDGKDYMVPLATTEGALVASTNRGARAISMAG--GARTVLTGDGMTRAPLLRMPSLEAAAELKAWVENPEN----FKLVAEAFSSTSRFGRLQSLVVSTAGRNAYLRFKCSTGDAMGMNMITKGVNAALAAVVERFPTARILSLSGNVCTDKKPSAINWVDGRGKSVTAEVVLSRDIVENTLKTTADALVELNTGKNLIGSAVAGSIGGFNAHAANIVSAVFLATGQDVAQNVESSMCLTLLEH------DDDPANEGGIIASVTMPSIEVGTVGGGTSLSSQAACLDLLGLR---------GAAAEPLTPGSNASQLA 418
BLAST of mRNA_H-elongata_contig10742.612.1 vs. uniprot
Match: A0A4S8JSD4_MUSBA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=3 Tax=Musa TaxID=4640 RepID=A0A4S8JSD4_MUSBA) HSP 1 Score: 344 bits (882), Expect = 1.040e-102 Identity = 232/537 (43.20%), Postives = 304/537 (56.61%), Query Frame = 1
Query: 43 LSGLPLDGMDYSSVYGKNCENVVGFVSLPVGIAGPLLV-----WVPLATTEGGLVASVNRGCRAISEGGHGGARAVIVDDGITRAPCIAMPDVRLALELKQWVEREKGPDAGFPVLVEAFQSTTRHGRLSSVTASMAGRHVYLRFKCTTGDAMGMNMVSKGCEAAVKEIQRRFEQARLIALSGNTCTDKKPSALNWTAGRGKSVVVEAVLSARAVTVVLKTTVKQMVECNTAKNIVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEETSCGGRQGDLRVSVTLPSLPVGTVGGGTGLSGQAACLQLAGCRTTAPGHFSFGAAVAELPPPSEVPRLAAPEGENSGRYIGAIDPGGLVR--------GSDAAAASGGDSYCQRTAISLVAEAAXXXXXXXXXXXAAAAISLLPGDAVGGAAGLTRPPSGNGAVTEGIAIEGSKGQRNEASPRTAAVEARPAPEAPKPEGGAFAASPHLPGTSARRLACIIGAAVMAGELSLLAALTSNDLVSTHMALNR 1614
+ GLPLDG DY+S+ G+ CE VG+V LPVGIAGPLL+ +VP+ATTEG LVAS NRGC+AI E GGA +V+ DG+TRAP + MP R A ELK +VE F + F ++R RL V ++AGR++Y+RF C+TGDAMGMNMVSKG + + +QR F +I++SGN C DKKP+A+NW GRGKSVV EA++ V VLKT V +VE N KN+ GSA+AG++GGFN+HA+N+V+AVF+ATGQDPA VE SHCIT+ME G+ DL VSVT+PS+ VGTVGGGT L+ QAACL L G + + S GA L + + A GE S + A+ G LV+ G D G +++ +S V A + D +T P G V G + + + A ++ G AS PG +AR LA I+ AV+AGELSLL+AL + LV +HM NR
Sbjct: 195 MEGLPLDGFDYASILGQCCELPVGYVQLPVGIAGPLLLDGRQYYVPMATTEGCLVASTNRGCKAIME--SGGASSVVFRDGMTRAPALRMPSARRAAELKAYVEEPNN----FETISLMFNKSSRFARLQDVHCALAGRNLYMRFSCSTGDAMGMNMVSKGVQNVLDYLQRDFPDMGVISISGNFCADKKPAAVNWIEGRGKSVVCEAIIKEEVVKKVLKTNVPALVELNMIKNLAGSAVAGALGGFNAHASNIVSAVFIATGQDPAQNVESSHCITMMEATNDGK---------DLHVSVTMPSIEVGTVGGGTQLASQAACLDLLGVKGAS--MESPGANARLL---ATIVAGAVLAGELS--LLSALAAGQLVKSHMKYNRSGKDLTKLWGFNAHASNI-VSAVFIATGQDPAQNVESSHCITMMEATNDGKDLHVSVTMPSIEVGTVGGGTQL----------ASQAACLDLL----------GVKGASMESPGANARLLATIVAGAVLAGELSLLSALAAGQLVKSHMKYNR 688
BLAST of mRNA_H-elongata_contig10742.612.1 vs. uniprot
Match: A0A151Z3I2_9MYCE (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z3I2_9MYCE) HSP 1 Score: 338 bits (868), Expect = 1.480e-102 Identity = 182/326 (55.83%), Postives = 234/326 (71.78%), Query Frame = 1
Query: 43 LSGLPLDGMDYSSVYGKNCENVVGFVSLPVGIAGPLL-----VWVPLATTEGGLVASVNRGCRAISEGGHGGARAVIVDDGITRAPCIAMPDVRLALELKQWVEREKGPDAGFPVLVEAFQSTTRHGRLSSVTASMAGRHVYLRFKCTTGDAMGMNMVSKGCEAAVKEIQRRFEQARLIALSGNTCTDKKPSALNWTAGRGKSVVVEAVLSARAVTVVLKTTVKQMVECNTAKNIVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEETSCGGRQGDLRVSVTLPSLPVGTVGGGTGLSGQAACLQL 1005
L LPLD +DYS V G CENV+G++ +PVG+AGPLL V +P+ATTEG LVAS +RGC+AI++ GGAR V++ +G+TRAP + +P V A ELKQW+E ++ F + AF ST+R RL ++ +AGR VYLRF+ +TGDAMGMNMVSKG E A++ +Q F + +++LSGN CTDKKPSA NW GRGKSVV EA +S V VLKT V+ +V+ N KN+VGSAMAGSIGGFN+HA+N+V A+++ATGQDPA VE S+CITLME V G+ DL +SVT+PS+ VGTVGGGT L Q+ACL L
Sbjct: 157 LQNLPLDHLDYSKVLGACCENVIGYIPIPVGVAGPLLLDNKPVSIPMATTEGCLVASTHRGCKAITK--SGGARTVVLQNGMTRAPVLRLPGVIRAGELKQWIENQEN----FYQIASAFNSTSRFARLKNIKVVVAGRLVYLRFRSSTGDAMGMNMVSKGVEKALEVLQEYFPEIEVLSLSGNLCTDKKPSATNWLEGRGKSVVCEATISGDIVRDVLKTNVQDLVQLNIDKNLVGSAMAGSIGGFNAHASNIVTALYIATGQDPAQNVESSNCITLMEAVNDGK---------DLYISVTMPSIEVGTVGGGTFLPAQSACLDL 467
BLAST of mRNA_H-elongata_contig10742.612.1 vs. uniprot
Match: B7GE13_PHATC (3-hydroxy-3-methylglutaryl coenzyme A reductase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GE13_PHATC) HSP 1 Score: 332 bits (852), Expect = 1.590e-102 Identity = 184/331 (55.59%), Postives = 227/331 (68.58%), Query Frame = 1
Query: 43 LSGLPLD-GMDYSSVYGKNCENVVGFVSLPVGIAGPLLV-----WVPLATTEGGLVASVNRGCRAISEGGHGGARAVIVDDGITRAPCIAMPDVRLALELKQWVEREKGPDAGFPVLVEAFQSTTRHGRLSSVTASMAGRHVYLRFKCTTGDAMGMNMVSKGCEAAVKEIQRRFEQARLIALSGNTCTDKKPSALNWTAGRGKSVVVEAVLSARAVTVVLKTTVKQMVECNTAKNIVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEETSCGGRQGDLRVSVTLPSLPVGTVGGGTGLSGQAACLQLAGCR 1017
L LP + +DY+ V+G NCE VVG+V LPVG+ GPL V +VP+ATTEG LVAS NRG +AI+ GG GA AV++ DGITRAPC+ MP A LK W E + F L AF+STT G+L ++AGR+VYLR C +GDAMGMNMVSKG A ++ +Q+ F + L+ALSGN CTDKK +A NW GRGKS+VVEA + VT LKTTV MV+ N KN++GSAMAG++GGFN+HA+N+V AVFLATGQDPA VE S+CITL+EE +GDL +S T+PS+ VGTVGGGT L QAACLQ G R
Sbjct: 2 LDNLPSEPSLDYTRVHGANCEIVVGYVPLPVGLVGPLTVNGETVYVPMATTEGCLVASTNRGAKAITAGG--GATAVLLRDGITRAPCVRMPSAAQAAHLKLWCETPQH----FSTLKRAFESTTSFGKLLKCAPTVAGRNVYLRLTCFSGDAMGMNMVSKGSLAVIETLQQEFPELVLVALSGNMCTDKKAAATNWLEGRGKSIVVEATIPKDVVTNTLKTTVHSMVQTNLHKNLIGSAMAGALGGFNAHASNIVTAVFLATGQDPAQNVESSNCITLLEETE----------EGDLWISCTMPSIEVGTVGGGTSLPAQAACLQAMGVR 316
BLAST of mRNA_H-elongata_contig10742.612.1 vs. uniprot
Match: A0A8K0N907_COCNU (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Cocos nucifera TaxID=13894 RepID=A0A8K0N907_COCNU) HSP 1 Score: 333 bits (855), Expect = 3.270e-102 Identity = 179/330 (54.24%), Postives = 231/330 (70.00%), Query Frame = 1
Query: 43 LSGLPLDGMDYSSVYGKNCENVVGFVSLPVGIAGPLLV-----WVPLATTEGGLVASVNRGCRAISEGGHGGARAVIVDDGITRAPCIAMPDVRLALELKQWVEREKGPDAGFPVLVEAFQSTTRHGRLSSVTASMAGRHVYLRFKCTTGDAMGMNMVSKGCEAAVKEIQRRFEQARLIALSGNTCTDKKPSALNWTAGRGKSVVVEAVLSARAVTVVLKTTVKQMVECNTAKNIVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEETSCGGRQGDLRVSVTLPSLPVGTVGGGTGLSGQAACLQLAGCR 1017
L GLPLDG DY S+ + CE VG+V LPVGIAGPLL+ +VP+ATTEG LVAS NRGC+AI+E GGA +V++ DG+TRAP + +P VR A EL +VE + F L F ++R RL + ++AGR++Y+RF C+TGDAMGMNMVSKG + + +Q F ++++SGN C+DKKP+A+NW GRGKSVV EA + V VLKTTV +VE N KN+ GSA+AG++GGFN+HA+N+V+AVF+ATGQDPA VE SHCIT+ME V G+ DL VSVT+PS+ VGTVGGGT L+ QAACL L G +
Sbjct: 51 LEGLPLDGFDYGSILRQCCELPVGYVQLPVGIAGPLLLDRRQYYVPMATTEGCLVASTNRGCKAIAE--SGGAASVVLRDGMTRAPVVRLPSVRRAAELVAFVEEP----SNFETLAVVFNRSSRFARLQGIQCALAGRNLYMRFSCSTGDAMGMNMVSKGVQNVLDYLQGDFPDMDVMSISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVKKVLKTTVPALVELNMIKNLAGSAVAGALGGFNAHASNIVSAVFIATGQDPAQNVESSHCITMMEAVNDGK---------DLHVSVTMPSIEVGTVGGGTQLASQAACLDLLGVK 365
BLAST of mRNA_H-elongata_contig10742.612.1 vs. uniprot
Match: UPI0006447F25 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006447F25) HSP 1 Score: 337 bits (863), Expect = 5.260e-102 Identity = 183/326 (56.13%), Postives = 230/326 (70.55%), Query Frame = 1
Query: 43 LSGLPLDGMDYSSVYGKNCENVVGFVSLPVGIAGPLL-----VWVPLATTEGGLVASVNRGCRAISEGGHGGARAVIVDDGITRAPCIAMPDVRLALELKQWVEREKGPDAGFPVLVEAFQSTTRHGRLSSVTASMAGRHVYLRFKCTTGDAMGMNMVSKGCEAAVKEIQRRFEQARLIALSGNTCTDKKPSALNWTAGRGKSVVVEAVLSARAVTVVLKTTVKQMVECNTAKNIVGSAMAGSIGGFNSHAANVVAAVFLATGQDPAHTVEGSHCITLMEEVRAGEETSCGGRQGDLRVSVTLPSLPVGTVGGGTGLSGQAACLQL 1005
L+ LPLD DY+ V G CEN++G++ +PVG+AGPLL V +P+ATTEG LVAS +RGC+AI++ GGAR+VI+ +G+TRAP P V A ELK W+E ++ F + AF ST+R RL S+ MAGR VYLRFK +TGDAMGMNMVSKG E A++ IQ F + +++LSGN CTDKKPSA NW GRGKSVV EA +S V VLKTTV+ + N KN++GSAMAGSIGGFN+HA+N+V A+F+ATGQDPA VE S+CITLME G+ DL +SVT+PS+ VGTVGGGT L Q+ACL L
Sbjct: 143 LNNLPLDHYDYTKVLGACCENIIGYIPIPVGVAGPLLLDGKLVSIPMATTEGCLVASTHRGCKAITK--SGGARSVILQNGMTRAPVCRFPSVTRAAELKTWIETQEN----FYQIATAFNSTSRFARLKSIKIVMAGRLVYLRFKSSTGDAMGMNMVSKGVEKALEVIQEYFPEMEVLSLSGNLCTDKKPSATNWLDGRGKSVVCEATISGDIVRDVLKTTVQSLCSLNIDKNLIGSAMAGSIGGFNAHASNIVTALFIATGQDPAQNVESSNCITLMEPFNDGK---------DLYISVTMPSIEVGTVGGGTHLPAQSACLDL 453 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10742.612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10742.612.1 >prot_H-elongata_contig10742.612.1 ID=prot_H-elongata_contig10742.612.1|Name=mRNA_H-elongata_contig10742.612.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=661bp MDYSSVYGKNCENVVGFVSLPVGIAGPLLVWVPLATTEGGLVASVNRGCRback to top mRNA from alignment at H-elongata_contig10742:317..5381+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10742.612.1 ID=mRNA_H-elongata_contig10742.612.1|Name=mRNA_H-elongata_contig10742.612.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5065bp|location=Sequence derived from alignment at H-elongata_contig10742:317..5381+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10742:317..5381+ >mRNA_H-elongata_contig10742.612.1 ID=mRNA_H-elongata_contig10742.612.1|Name=mRNA_H-elongata_contig10742.612.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3966bp|location=Sequence derived from alignment at H-elongata_contig10742:317..5381+ (Himanthalia elongata Himel1 dioecious)back to top |