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Homology
BLAST of mRNA_H-elongata_contig20574.5875.1 vs. uniprot
Match: A0A6H5JC44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC44_9PHAE) HSP 1 Score: 607 bits (1564), Expect = 2.010e-195 Identity = 449/1065 (42.16%), Postives = 580/1065 (54.46%), Query Frame = 3
Query: 348 KPDSRALALDCLRLGVQIFFS-EAESCRVGARDVLSVGAMGSLDERWSVRVAAAQLAGEILKRVG-QEELSTLLSSEQGYWLSALLVDGCPEVKEAARVAFCSATSI--------------PLDHTVRN-----ASPTSAISSSSDLSMMAAASALVRGASNFLRATV---AAIQGKREGGGGNSRAVDIATEARTRMAFRVLQGGVGLIESS-GSRVGAESL------------------GKIKRTL--VEAIEVIEAWVLYTLNNIPPTLLPWEEWSSTTVDHNGVLG--------GSLSSEVRDTARAL-LGG--GRCNMKSTATEAAIIAVEDFRAKCYRLSSGGGAGRAAESXEEDGKEEESWRRVYCAMLVRLET---FFI---PVERVDSKEKMQAADVVTEVRKKHKGRGKTLSSERASPAEETRGVRHDGSTEHRDALAGATCEMIDPVGDISSGVEPGSAESIARALEGVPSAFEHTVPFHLEDDNILSAVAKKAIRLRGASRRRWLIANAHLLLRAGKRLCDRCQTSP-------PNTTEARSPTETPVGQARIVKLLVATLPFKQASTDADNPIEAFLACTRRESDHQSSVLPQPSLANPEATATVTTHGAEIVTPVPWKACVVMQEALYKHQLLAPWAADPLTMKLATALVESAWSVLSRGDEH---SLTDRSAEGIVLELRAVARSRG-WREEDGVGVKHAVAATIRRLRFPLVAGSVLGHALPLALPLVDDHDASHQAVGLSLLLHIVAEATPTELSWHAPLLLEVLEQGLRGGGSRDPAAAMLRLTVAVRLSRHN-STSKGSAASVGREGFRIAREALAQAGRTNDGEVRIAMVCGAAALLELPGNGGGYAPCELLRPALLCLLPILQ----------------------------QSSPISARLDARAATLRALNVLCRSCWPRVHAHASKLLCALLWTCGDCSRRAAFELDTTD----GGRKDGKT--------TATFLRSRDVDIKAADDVVRSHAERLGALVVLLGGS---------AARVTLNEICAAVGALQPAAAAMLDLAD 3173
K SRALALDCL LG+ + + E + R+ L+V A+G+ DERW VRVAAA+ AGE+L+R G QE+L LLSSEQG WL ALL DG PEV+ AAR A + + P ++ + A+P A SS + A +RGA LRA +A++ + GG + RAVD+A E TR A R L+GG L+ S G R L K + T VEA+E +EA ++ TL P +PW ++ D +G G LS E +T RAL LGG G ++ A EAA AVE+FR++C LS+GG GR E+ E G E W+RVYC +LVRLE F + P R + VV E + H ++ E G G + A G+ + + AE +A ALE VP A+E VP +L+ ++ ++ K A+R G RRRW+ A+ HLLLRAG LC++ + S E + +VKLLVA LPF+QA+T+AD+P EA+L+C R D P L A AT + +E+ P+PW++CV AL +H L APWA+ T++LA LV+ AWS L G + S +AE ++ LRA R+RG WRE+ GVG+KHA +A IRRLRFPL +G+ LGHALPLALPL DD+D +HQAVG SLLL + AEA P EL WH LLLEVLE+G+R GG RDP+A+ L +T AVRL R + R G RIARE LAQA R DG V+ MVCGAAALLE+P G GYAPCE LRPALLCLLPILQ +S P+S+RLDARAA+LRA+ LC SCWPRVHAHASKLLC+LLWTCGDC+RRA+ +T GGR + + A + +D + D+ VR++A RLGALV++L G AAR TL EICAAV L+P AAM LAD
Sbjct: 108 KARSRALALDCLSLGLVLHLALSEEDMKYFRREALAVAAVGAKDERWEVRVAAARTAGEVLRRTGAQEKLIHLLSSEQGCWLPALLADGYPEVQHAARAALTQSLACLDGSGDGMPENGLNPAAGSLSSSPSAAAAPVGATSSFPATAAAAXXXXXMRGACEALRAVALSNSAVEPE-AGGVADLRAVDLAEEETTRTALRALRGGASLLGSPPGERESHSHLPPLASPSAPPGPREEEEGNKQEATAARVEALESVEALLVATLPEFPYLSVPW---AAEGGDQHGAAASAGSAAGVGGLSLEAGETVRALSLGGTEGPAGFRAKALEAATAAVEEFRSEC--LSAGGDGGR--EAGGEGG--EGLWKRVYCGLLVRLEACSAFMVGPEPPSRPTAVSLPAREGVVVERQDGHDTPAAAPPAQTPIAGEGAGGSSVGGESTTAPAARGSPPSSLARL-----------AEGLAEALEEVPLAYEQAVPPNLDINDDMTISEKNALRSWGGRRRRWMAASTHLLLRAGANLCEQYRRSSCGXXXXXXXXXXXXXXXEEALASVTLVKLLVAALPFEQAATEADDPTEAWLSCMRPPED-------TPGLD--PAGATAPSAASELTAPIPWESCV-HGRALPRHALSAPWASHANTVELAKRLVDVAWSALYLGGDDAGGSGPTAAAETLMRALRAATRARGGWREDAGVGIKHAASAAIRRLRFPLFSGAALGHALPLALPLADDYDPAHQAVGFSLLLRLFAEAPPAELGWHRGLLLEVLERGIRCGG-RDPSASALCMTAAVRLLRCSPKNGXXXXXXXERAGIRIARETLAQAARATDGTVKAVMVCGAAALLEVPATGEGYAPCEFLRPALLCLLPILQVRADAAAFYSSTRAHDPPSHHPIPTPSRKSPPVSSRLDARAASLRAVRALCLSCWPRVHAHASKLLCSLLWTCGDCARRASVRTLSTSSSPGGGRANDRPKRPQPSLGVALAANAAAID-PSTDEAVRTYATRLGALVLVLAGDXXXXXXXXXAARSTLREICAAVSVLRPHGAAMERLAD 1139
BLAST of mRNA_H-elongata_contig20574.5875.1 vs. uniprot
Match: D7FT98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT98_ECTSI) HSP 1 Score: 591 bits (1524), Expect = 7.800e-190 Identity = 446/1058 (42.16%), Postives = 574/1058 (54.25%), Query Frame = 3
Query: 300 LLDVARDTLA------MPMGKIKPD--SRALALDCLRLGVQIFFSEAESCRVG--ARDVLSVGAMGSLDERWSVRVAAAQLAGEILKRVG-QEELSTLLSSEQGYWLSALLVDGCPEVKEAARVAFCSATSIP---LDHTVRNASPTSAISSSSDLSMMAAA-------------SALVRGASNFLRATVAA-IQGKREGGGG-NSRAVDIATEARTRMAFRVLQGGVGLIESS-GSRVGAESLGKIKRTL--------------------VEAIEVIEAWVLYTLNNIPPTLLPW-----EEWSSTTVDHNGVLGGSLSSEVRDTARAL-LGG--GRCNMKSTATEAAIIAVEDFRAKCYRLSSGGGAGRAAESXEEDGKEEES-WRRVYCAMLVRLE---TFFIPVERVDSKEKMQAA---DVVTEVRKKHKGRGKTLSSERASPAEETRGVRHDGSTEHRDALAGATCEMIDPVGDISSGVEPGSAESIARALEGVPSAFEHTVPFHLEDDNILSAVAKKAIRLRGASRRRWLIANAHLLLRAGKRLCDR----CQTSPPNTTEAR---SPTETPVGQARIVKLLVATLPFKQASTDADNPIEAFLACTRRESDHQSSVLPQPSLANPEATATVTTHGAEIVTPVPWKACVVMQEALYKHQLLAPWAADPLTMKLATALVESAWSVLSRGDEH---SLTDRSAEGIVLELRAVARSRG-WREEDGVGVKHAVAATIRRLRFPLVAGSVLGHALPLALPLVDDHDASHQAVGLSLLLHIVAEATPTELSWHAPLLLEVLEQGLRGGGSRDPAAAMLRLTVAVRLSRHNSTSKGSAASVG-----REGFRIAREALAQAGRTNDGEVRIAMVCGAAALLELPGNGGGYAPCELLRPALLCLLPILQQSSPISARLDARAATLRALNVLCRSCWPRVHAHASKLLCALLWTCGDCSRRAA---FELDTTDGGR-KDGK-----TTATFLRSRDVDIKA-ADDVVRSHAERLGALVVLLGGS---------AARVTLNEICAAVGALQPAAAAMLDLAD 3173
LLD+AR L + +G P SRALALDCL LG+ + +E R+ R+ L+V A+G+ DERW VRVAAA+ AGE+L+R G QE+L LLSS+QG WL ALL DG PEV+ AAR A + + P D N +A+S S S AA +RGA LRA + + + E GG + RAVD+A E TR A R L+GG L+ S G R L + + VEA+E +EA ++ TL + P +PW ++ + + G LS E +T AL LGG G ++ A EAA AVE+FR++C ++G G G E GK E W+RVYC +LVRLE F + E + VV R H T ++ E G G + A G+ + + E+ A ALE VP A+E VP +L++++ ++ K A+R RG RRRW++A+ HLLLRAG +LC++ C P A S E + A +VKLL AD+P EA+L+C R D P L A AT + +E+ P+PW++CV Q AL +H L APWA+ T++LA LV+ AWS L G + S +AE ++ LRA R+RG WRE+ GVG+KHA +A IRRLRFPL +G+ LGHALPLALPL DD+D +HQAVG SLLL + AEA P EL H LLLEVLE+G+R GG RDP+A+ L + VRL R + R G RIARE LAQA R DG V+ MVCGAAALLE+P G GYAPCE LRPALLCLLPILQ S P+S+RLDARAA+LRA+ LC SCWPRVHAHASKLLC+LLWTCGDC+RRA+ + GGR KDG + L + I D+ VR++A RLGALV++L G AAR TL EICAAV L+P AAM LAD
Sbjct: 94 LLDIARLALTPSCAGGVRVGTTPPKARSRALALDCLSLGLVLHLEPSEGDRLKDFRREALAVAAVGAKDERWEVRVAAARAAGEVLRRTGGQEKLVHLLSSKQGCWLPALLADGYPEVQHAAREALTQSLACPDGSCDGMPENGLNPAAVSLPSSPSAAAAPVRAASXXXXXXXXXXAMRGACEALRAAALSNLDVEPEAGGVVDLRAVDLAEEETTRTALRALRGGASLLGSPPGERESHSHLPLLASSSALPGRREEEHGNEQEATAARVEALESVEALLVGTLPDFPDLSVPWAAEGGDQHGAAASARSAAGVGGLSLEAGETVCALSLGGAEGAAGFRAKALEAATAAVEEFRSECLSAAAGDGGG------ETGGKGGEGLWKRVYCGLLVRLEGCSAFMVGPEPPSPPTAVSLPAREGVVVNGRDGHDTSAATPPTQALIAGEGAGGSTVGGESTTAPAARGSPPSSLARL-----------TEAFAEALEEVPLAYEQAVPPNLDNNDDMTISEKNALRARGGRRRRWMVASTHLLLRAGAKLCEQYRRSCGGGAPAADVAGGSGSGGEQALASATLVKLL------------ADDPNEAWLSCMRSPED-------TPGLD--PAGATAPSSASELTAPIPWESCVHGQ-ALPRHYLSAPWASHATTVELAKRLVDIAWSALYLGGDDAGGSGPTAAAETLMRALRAATRARGGWREDAGVGIKHAASAAIRRLRFPLFSGAALGHALPLALPLADDYDPAHQAVGFSLLLRLFAEAPPAELGLHRGLLLEVLERGIRCGG-RDPSASALCMAAVVRLLRRSXXXXXXXXXXXXXXXERAGIRIARETLAQAARATDGAVKAVMVCGAAALLEVPATGKGYAPCEFLRPALLCLLPILQ-SPPVSSRLDARAASLRAVRALCLSCWPRVHAHASKLLCSLLWTCGDCTRRASVRRLSSSSPGGGRAKDGPARPQPSLGVVLAANAAAIDPLTDEAVRTYATRLGALVLVLAGDXXXXXXXXXAARSTLREICAAVSVLRPHGAAMERLAD 1110
BLAST of mRNA_H-elongata_contig20574.5875.1 vs. uniprot
Match: A0A5D6Y0K9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0K9_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 9.220e-10 Identity = 65/219 (29.68%), Postives = 92/219 (42.01%), Query Frame = 3
Query: 2265 KHAVAATIRRLRFPLVAGSVLGHALPLALPLVDDHDASHQAVGLSLLLHIVAEATPTELSWHAPLLLEVLEQGLRGGGSRDPAAAMLRLTVAVRLSRHNSTSKGSAASVGREGFRIAREALAQAGRTNDGEVRIAMVCGAAALLELPGNGGGYAPCELLRPALLCLLPILQQSSPISARLDARAATLRALNVLCRSCWPRVHAHASKLLCALLWTCGDC 2921
KHA+ + +L FP + G +LG L L PL+DD QAVG S+L H+V T TEL W+ +LLEVL + A + LT A+ + G A R+ L A D VR + + G L+P L ++ + S + L+A L L V RS WPRV AHA ++ ++ C
Sbjct: 147 KHALCWVVLQLPFPHLGGDLLGRLLALVFPLIDDLSNESQAVGASMLQHVVRSVTATELRWYGDVLLEVLRPAITSRQPETLDALLDALTTAL----DKLSPPGEFAHFDTFFPRL----LTDASLCTDVSVRALFLRRLRPAIVRMGAPQSVHVIRYLQPLLKVVVASFE-SINVPLLLEA----LETLRVTIRSAWPRVPAHAEEIFVGVMRAVAFC 352
BLAST of mRNA_H-elongata_contig20574.5875.1 vs. uniprot
Match: A0A067BH91_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BH91_SAPPC) HSP 1 Score: 66.6 bits (161), Expect = 4.610e-8 Identity = 44/120 (36.67%), Postives = 66/120 (55.00%), Query Frame = 3
Query: 2223 ARSRGWREEDGVGVKHAVAATIRRLRFPLVAGSVLGHALPLALPLVDDHDASHQAVGLSLLLHIVAEATPTELSWHAPLLLEVLEQGLRGGGSRDP-AAAMLRL---TVAVRLSRHNSTS 2570
AR+ W G +A +++L FP + V+G L LALPL+D S Q +G+ +L H+VAEATPT++ WH+ ++L +L + L+ S A LR T+AV H+ TS
Sbjct: 3 ARAETW-VRAGCPAPYAFRFLVQQLVFPALDHDVVGRTLALALPLLDQTIVSVQRIGVDVLQHVVAEATPTDVRWHSDIVLHMLYETLKIAMSNASFLQATLRCLADTLAVTSVAHDITS 121
BLAST of mRNA_H-elongata_contig20574.5875.1 vs. uniprot
Match: T0R0V7_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R0V7_SAPDV) HSP 1 Score: 66.2 bits (160), Expect = 1.950e-7 Identity = 62/210 (29.52%), Postives = 92/210 (43.81%), Query Frame = 3
Query: 2286 IRRLRFPLVAGSVLGHALPLALPLVDDHDASHQAVGLSLLLHIVAEATPTELSWHAPLLLEVLEQGLRGGGSRDP-AAAMLRL---TVAVRLSRHNSTSKGSAASVGREGFRIAREALAQAGRTNDGEVRIAMVCGAAALLELPGNGGGYAPCELLRPALLCLLPILQQSSPISARLDARAATLRALNVLCRSCWPRVHAHASKLLCALL 2903
+R+L FP + V+G L LALPL+D S Q +G+ +L H+VAEATPT++ WH+ ++L +L + L+ S A LR T+AV H+ TS R L T+D ++ V G + G + L L LL L+ LDA L L ++ W R+ H ++ LL
Sbjct: 208 VRQLAFPALDHDVVGRTLALALPLLDQTIVSVQRIGVDVLQHVVAEATPTDVRWHSDIVLHMLYETLKIAMSDASFLQATLRCLADTLAVTSVAHDITSYD----------RFFPTLLRSWDMTSDVSMKRVYVVGLRPWIVAMGAPHSVQIVQYLPSVLTVLLACLENKL---LTLDA----LETLRLVVVHAWVRIPTHVDDVVLGLL 400
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 78.2 |
| Seed ortholog evalue | 2.5e-11 |
| Seed eggNOG ortholog | 164328.Phyra78900 |
| Preferred name | TTI2 |
| KEGG ko | ko:K08155 |
| KEGG TC | 2.A.1.2.11,2.A.1.2.12,2.A.1.2.29 |
| KEGG Pathway | ko04721,ko04726,ko04728,ko05012,ko05030,ko05031,ko05034,map04721,map04726,map04728,map05012,map05030,map05031,map05034 |
| GOs | GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0015630,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0070013 |
| EggNOG OGs | 2CNEB@1,2QVMM@2759,3Q9T9@4776 |
| Best tax level | Peronosporales |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko02000 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Armadillo-type fold |
| Ec32 ortholog | Ec-06_003590.1 |
| Exons | 4 |
| Model size | 3173 |
| Cds size | 3087 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622930152.066516-UTR-H-elongata_contig20574:1824..1910 | 1622930152.066516-UTR-H-elongata_contig20574:1824..1910 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig20574 1825..1910 + |
| 1691679301.003389-UTR-H-elongata_contig20574:1824..1910 | 1691679301.003389-UTR-H-elongata_contig20574:1824..1910 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig20574 1825..1910 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622930152.0791621-CDS-H-elongata_contig20574:1910..2001 | 1622930152.0791621-CDS-H-elongata_contig20574:1910..2001 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20574 1911..2001 + |
| 1691679301.0160568-CDS-H-elongata_contig20574:1910..2001 | 1691679301.0160568-CDS-H-elongata_contig20574:1910..2001 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20574 1911..2001 + |
| 1622930152.0968049-CDS-H-elongata_contig20574:2369..2767 | 1622930152.0968049-CDS-H-elongata_contig20574:2369..2767 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20574 2370..2767 + |
| 1691679301.025859-CDS-H-elongata_contig20574:2369..2767 | 1691679301.025859-CDS-H-elongata_contig20574:2369..2767 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20574 2370..2767 + |
| 1622930152.1128864-CDS-H-elongata_contig20574:3181..5383 | 1622930152.1128864-CDS-H-elongata_contig20574:3181..5383 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20574 3182..5383 + |
| 1691679301.0346508-CDS-H-elongata_contig20574:3181..5383 | 1691679301.0346508-CDS-H-elongata_contig20574:3181..5383 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20574 3182..5383 + |
| 1622930152.1261213-CDS-H-elongata_contig20574:5903..6299 | 1622930152.1261213-CDS-H-elongata_contig20574:5903..6299 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20574 5904..6299 + |
| 1691679301.0434048-CDS-H-elongata_contig20574:5903..6299 | 1691679301.0434048-CDS-H-elongata_contig20574:5903..6299 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig20574 5904..6299 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig20574.5875.1 >prot_H-elongata_contig20574.5875.1 ID=prot_H-elongata_contig20574.5875.1|Name=mRNA_H-elongata_contig20574.5875.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1029bp
MSDHQRYQDELQDLLKELRNDCKAETSPARVAEEAPSTPVPDAAASGGSS DLRPDDAKRHFPPQEALSLSDLLDVARDTLAMPMGKIKPDSRALALDCLR LGVQIFFSEAESCRVGARDVLSVGAMGSLDERWSVRVAAAQLAGEILKRV GQEELSTLLSSEQGYWLSALLVDGCPEVKEAARVAFCSATSIPLDHTVRN ASPTSAISSSSDLSMMAAASALVRGASNFLRATVAAIQGKREGGGGNSRA VDIATEARTRMAFRVLQGGVGLIESSGSRVGAESLGKIKRTLVEAIEVIE AWVLYTLNNIPPTLLPWEEWSSTTVDHNGVLGGSLSSEVRDTARALLGGG RCNMKSTATEAAIIAVEDFRAKCYRLSSGGGAGRAAESSEEDGKEEESWR RVYCAMLVRLETFFIPVERVDSKEKMQAADVVTEVRKKHKGRGKTLSSER ASPAEETRGVRHDGSTEHRDALAGATCEMIDPVGDISSGVEPGSAESIAR ALEGVPSAFEHTVPFHLEDDNILSAVAKKAIRLRGASRRRWLIANAHLLL RAGKRLCDRCQTSPPNTTEARSPTETPVGQARIVKLLVATLPFKQASTDA DNPIEAFLACTRRESDHQSSVLPQPSLANPEATATVTTHGAEIVTPVPWK ACVVMQEALYKHQLLAPWAADPLTMKLATALVESAWSVLSRGDEHSLTDR SAEGIVLELRAVARSRGWREEDGVGVKHAVAATIRRLRFPLVAGSVLGHA LPLALPLVDDHDASHQAVGLSLLLHIVAEATPTELSWHAPLLLEVLEQGL RGGGSRDPAAAMLRLTVAVRLSRHNSTSKGSAASVGREGFRIAREALAQA GRTNDGEVRIAMVCGAAALLELPGNGGGYAPCELLRPALLCLLPILQQSS PISARLDARAATLRALNVLCRSCWPRVHAHASKLLCALLWTCGDCSRRAA FELDTTDGGRKDGKTTATFLRSRDVDIKAADDVVRSHAERLGALVVLLGG SAARVTLNEICAAVGALQPAAAAMLDLAD back to topmRNA from alignment at H-elongata_contig20574:1825..6299+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig20574.5875.1 ID=mRNA_H-elongata_contig20574.5875.1|Name=mRNA_H-elongata_contig20574.5875.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4475bp|location=Sequence derived from alignment at H-elongata_contig20574:1825..6299+ (Himanthalia elongata Himel1 dioecious) GTTGTCGCGAAAAGCTTTAGCTGCAAAAATATTCCCCATTCATGGAGCAT
AGGTCCTCTAGTTCATAGTTTAATCGACACGTAACCATGAGTGATCATCA
GCGATACCAAGATGAACTACAGGATCTTCTGAAAGAGCTACGGAACGACT
GTAAGGCGGAGACATCGCCAGCTCGAGGTGATGAGCGCCCTTGCGACCTT
TTTCAAATTTATGGTCTAATACCGTAGTAATAAAACTAAAAACGTGTCTA
TTTTTGTTGTTGCCCATACGCCGCCAGCTGAGGACACAAGAAAAAGCAAC
AAGGCGAGCGCCGAGCGACTGGCGGTATAGCTCGATAGTTGGAGTCAAGC
CATACCACCTTTCAGAAACCCCCAATTCATTATACTTGTACGAAGATGTC
CCGCAAGACGGGGTTTCTTTAAATACACAAGAAAAATGTTGTGCCTTAAA
GGACCCTTCAAACTGCTACTGGGGATCAACAAGCTCTCTGAAAACCGTTA
TCAACTCGGCCACGGATGTGTTGTCTTATCATCGATCCACAGCAGTCGCG
GAGGAAGCACCGTCAACGCCAGTTCCGGACGCAGCAGCGAGCGGCGGCAG
CAGCGACCTCCGCCCCGACGACGCCAAACGACATTTCCCACCCCAAGAAG
CACTCTCGTTGTCTGATCTTCTCGATGTAGCTCGTGACACACTAGCAATG
CCGATGGGTAAAATTAAACCCGATTCCCGGGCTCTAGCGCTCGACTGCCT
CCGACTCGGCGTTCAGATATTCTTCTCCGAAGCGGAGAGCTGTCGAGTGG
GTGCACGAGATGTCCTGTCCGTAGGGGCGATGGGTTCCCTCGACGAGCGG
TGGAGCGTTCGGGTTGCCGCAGCACAGTTGGCGGGGGAAATCCTCAAGAG
GGTGGGACAAGAGGAGTTGTCTACTTTACTGTCGTCAGAGCAGGTGAGAG
GGCTAATAAAGCAGCTTGAGGTTTCGTTTTTCATCAGTAGAAGGGGGTAA
TGCTAGCGTTCGTAACGTCGAGGAAATCACATGCAAACAGTGACGAAGAT
GACACCAGTTGCTCCGGTTTGAGGCGCTCCTCGGAGGGCTGAGCATGAGG
CGTGCGTCGTAGTACAGCACGAATATATGGACAACTGTCTGCCGGCAACC
ATGGCTCGTGTTCTCTTGTCCTAGGTGCCTGACGCTCTCGACCTTGAGCG
CGCGCTCTTCAAGCTCCTGTTATACTCTTGTACACCAACTCTTTTTGAAT
AGTTCATTCGTTTTCTCGCTGCCGTCGGTGCCTCTGTTGCCTCGCCAACT
TCCACGTCTTTTATATTGTCTGTCGTCCGGGATATTACCATCCCCGACAA
CCGACAGGGGTACTGGTTGTCCGCCCTTCTGGTCGACGGCTGCCCTGAGG
TGAAAGAGGCAGCGCGAGTCGCCTTTTGCTCCGCTACCTCTATCCCGCTT
GACCACACCGTCCGAAACGCATCGCCAACATCAGCCATAAGCTCATCGAG
TGACTTAAGCATGATGGCAGCCGCATCCGCCCTAGTACGTGGTGCCTCCA
ATTTCCTCCGCGCGACTGTGGCAGCAATCCAAGGGAAACGCGAAGGCGGA
GGTGGAAACTCACGAGCGGTCGATATCGCGACCGAGGCCAGAACGCGCAT
GGCGTTCCGAGTTCTGCAAGGAGGAGTGGGTCTGATAGAGTCATCCGGAT
CGAGGGTAGGGGCGGAATCCTTAGGGAAGATCAAGCGGACACTGGTGGAA
GCCATCGAAGTGATCGAAGCTTGGGTATTGTACACGTTAAACAACATTCC
TCCGACCTTGTTGCCTTGGGAAGAATGGAGTTCCACCACCGTGGATCATA
ACGGCGTCCTCGGGGGTAGTCTTTCCTCCGAAGTTCGTGACACGGCTCGG
GCTCTCTTAGGAGGAGGTAGATGCAACATGAAATCGACCGCCACTGAAGC
GGCAATAATTGCGGTAGAGGACTTCAGAGCTAAATGCTACAGACTTTCGT
CGGGCGGGGGCGCGGGGCGAGCGGCGGAAAGCAGCGAAGAGGATGGAAAA
GAGGAGGAATCTTGGCGACGGGTATATTGTGCGATGCTCGTGCGTCTTGA
GACGTTTTTTATCCCGGTGGAGCGGGTTGACTCGAAGGAAAAGATGCAGG
CAGCCGACGTTGTCACGGAAGTAAGAAAAAAACATAAAGGAAGAGGAAAA
ACACTTTCGTCCGAGAGGGCATCACCAGCCGAGGAAACTCGTGGAGTTCG
CCATGATGGCTCTACTGAGCACCGCGACGCTCTAGCAGGTGCGACTTGCG
AAATGATCGACCCTGTGGGTGACATATCATCGGGCGTCGAGCCAGGATCG
GCTGAAAGCATCGCGCGAGCGCTGGAAGGAGTACCCTCTGCGTTCGAGCA
CACTGTACCGTTTCACCTTGAAGACGATAACATATTGTCCGCCGTTGCCA
AGAAAGCGATACGATTACGAGGAGCGAGTCGACGAAGGTGGTTGATCGCC
AATGCGCACCTCCTCCTCAGGGCAGGGAAGCGCCTATGTGATCGATGTCA
GACGTCGCCGCCGAATACCACAGAAGCCAGATCCCCCACCGAGACTCCAG
TTGGCCAGGCGAGGATTGTCAAGCTTCTGGTGGCAACCTTGCCCTTCAAG
CAAGCTTCCACAGATGCGGACAACCCGATCGAAGCATTTTTGGCGTGCAC
GCGGCGGGAGAGCGACCATCAGTCTTCTGTACTACCGCAGCCGTCCCTTG
CCAACCCGGAGGCAACCGCTACGGTAACGACGCATGGTGCGGAGATCGTG
ACCCCTGTACCGTGGAAAGCTTGCGTTGTCATGCAAGAAGCACTCTACAA
ACACCAGCTTTTGGCGCCGTGGGCCGCCGACCCGCTCACAATGAAGCTAG
CGACCGCCCTGGTTGAATCCGCCTGGAGCGTGCTCTCCCGCGGAGACGAA
CACTCCCTGACCGATCGGAGCGCGGAGGGTATCGTTCTGGAGCTTCGCGC
GGTAGCACGGAGTCGCGGGTGGCGGGAGGAAGACGGGGTGGGTGTCAAGC
ACGCGGTTGCGGCGACCATCCGTCGCCTGCGGTTCCCGCTCGTGGCCGGA
TCGGTCCTCGGACACGCGCTGCCGCTGGCGTTGCCCCTTGTGGACGATCA
CGACGCCTCGCATCAAGCCGTAGGACTCTCCCTGTTGTTGCACATCGTGG
CGGAGGCTACCCCCACGGAGCTTTCCTGGCACGCCCCACTGTTGCTGGAG
GTTCTTGAGCAGGGTCTTCGGGGCGGGGGTTCGAGGGATCCGGCCGCTGC
CATGTTGCGTCTAACTGTCGCGGTGAGACTGTCGCGACACAACAGTACCT
CCAAGGGGAGCGCTGCCTCTGTTGGGAGAGAAGGGTTTCGAATCGCGAGG
GAAGCATTAGCGCAAGCGGGGAGGACTAATGATGGAGAAGTCAGAATTGC
CATGGTTTGCGGCGCGGCCGCTCTGTTGGAGCTTCCGGGGAACGGTGGTG
GCTACGCGCCGTGTGAGCTTTTGCGGCCAGCTCTACTATGCCTACTTCCA
ATCCTCCAGGTAGGTGGCGATGGCGGGTGGCTGTGTCTGACGTGATGCTT
GCGTGTTTTTCCTGTGCGATTGGCTCGGCTCGGACTCTCTGCGCAGCATA
ACAGACTGCTCACGTAAGCGTCTGTCTCCTGATTGATTATCTCTCTCTCT
CTTTATTGCCTGGTCGACTTTGTATCGACGGCAAGCGACTTGTTTGAGTG
CGGCCGGTCCGTGTAGGCGTTAGAGGAAAAGAGAAGGTAATATCGCCTTC
GAAACGTGATGGGCTTTATCACTCTACCGGCGAACGTTTCAAGAAGAATT
ACTGGCTTCACCCCCCCCCCGCCCCGACGTTTTGCGATAAGCATGAAGTT
GTAACGCTCCCAATCGATACTGCCAGCAATCGACAGCGCCAAAAATGGAA
ACATTGTGAGTCATCAGCAGTCGGCACATCGGAGGTTAGACGATGCTTTT
ATTGTCGTGGTGCCCCGCCTGACGCGACCGACTCCAACGCTCCATGTTTT
ATTTTTATGCTCTTCGCTATACAACCCAGCAGTCTTCTCCAATCTCCGCG
AGGCTTGACGCTCGGGCGGCAACGCTCAGGGCGCTGAACGTGCTCTGTCG
ATCCTGCTGGCCCCGAGTGCACGCCCACGCCTCCAAGCTCCTGTGCGCCT
TACTGTGGACGTGCGGCGACTGTTCCCGCCGAGCAGCTTTCGAGCTTGAT
ACGACAGACGGTGGCAGAAAAGATGGCAAGACAACAGCGACCTTCTTACG
CTCGAGGGATGTAGACATCAAGGCAGCGGACGACGTCGTTCGCTCTCACG
CGGAAAGGCTCGGTGCCCTGGTGGTGCTGCTAGGGGGAAGCGCCGCCCGC
GTGACGCTGAACGAGATCTGTGCCGCGGTGGGCGCGCTCCAGCCGGCCGC
GGCGGCGATGCTGGATCTCGCTGAC back to topCoding sequence (CDS) from alignment at H-elongata_contig20574:1825..6299+ >mRNA_H-elongata_contig20574.5875.1 ID=mRNA_H-elongata_contig20574.5875.1|Name=mRNA_H-elongata_contig20574.5875.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=6174bp|location=Sequence derived from alignment at H-elongata_contig20574:1825..6299+ (Himanthalia elongata Himel1 dioecious) ATGAGTGATCATCAGCGATACCAAGATGAACTACAGGATCTTCTGAAAGA GCTACGGAACGACTGTAAGGCGGAGACATCGCCAGCTCGAGATGAGTGAT CATCAGCGATACCAAGATGAACTACAGGATCTTCTGAAAGAGCTACGGAA CGACTGTAAGGCGGAGACATCGCCAGCTCGAGTCGCGGAGGAAGCACCGT CAACGCCAGTTCCGGACGCAGCAGCGAGCGGCGGCAGCAGCGACCTCCGC CCCGACGACGCCAAACGACATTTCCCACCCCAAGAAGCACTCTCGTTGTC TGATCTTCTCGATGTAGCTCGTGACACACTAGCAATGCCGATGGGTAAAA TTAAACCCGATTCCCGGGCTCTAGCGCTCGACTGCCTCCGACTCGGCGTT CAGATATTCTTCTCCGAAGCGGAGAGCTGTCGAGTGGGTGCACGAGATGT CCTGTCCGTAGGGGCGATGGGTTCCCTCGACGAGCGGTGGAGCGTTCGGG TTGCCGCAGCACAGTTGGCGGGGGAAATCCTCAAGAGGGTGGGACAAGAG GAGTTGTCTACTTTACTGTCGTCAGAGCAGTCGCGGAGGAAGCACCGTCA ACGCCAGTTCCGGACGCAGCAGCGAGCGGCGGCAGCAGCGACCTCCGCCC CGACGACGCCAAACGACATTTCCCACCCCAAGAAGCACTCTCGTTGTCTG ATCTTCTCGATGTAGCTCGTGACACACTAGCAATGCCGATGGGTAAAATT AAACCCGATTCCCGGGCTCTAGCGCTCGACTGCCTCCGACTCGGCGTTCA GATATTCTTCTCCGAAGCGGAGAGCTGTCGAGTGGGTGCACGAGATGTCC TGTCCGTAGGGGCGATGGGTTCCCTCGACGAGCGGTGGAGCGTTCGGGTT GCCGCAGCACAGTTGGCGGGGGAAATCCTCAAGAGGGTGGGACAAGAGGA GTTGTCTACTTTACTGTCGTCAGAGCAGGGGTACTGGTTGTCCGCCCTTC TGGTCGACGGCTGCCCTGAGGTGAAAGAGGCAGCGCGAGTCGCCTTTTGC TCCGCTACCTCTATCCCGCTTGACCACACCGTCCGAAACGCATCGCCAAC ATCAGCCATAAGCTCATCGAGTGACTTAAGCATGATGGCAGCCGCATCCG CCCTAGTACGTGGTGCCTCCAATTTCCTCCGCGCGACTGTGGCAGCAATC CAAGGGAAACGCGAAGGCGGAGGTGGAAACTCACGAGCGGTCGATATCGC GACCGAGGCCAGAACGCGCATGGCGTTCCGAGTTCTGCAAGGAGGAGTGG GTCTGATAGAGTCATCCGGATCGAGGGTAGGGGCGGAATCCTTAGGGAAG ATCAAGCGGACACTGGTGGAAGCCATCGAAGTGATCGAAGCTTGGGTATT GTACACGTTAAACAACATTCCTCCGACCTTGTTGCCTTGGGAAGAATGGA GTTCCACCACCGTGGATCATAACGGCGTCCTCGGGGGTAGTCTTTCCTCC GAAGTTCGTGACACGGCTCGGGCTCTCTTAGGAGGAGGTAGATGCAACAT GAAATCGACCGCCACTGAAGCGGCAATAATTGCGGTAGAGGACTTCAGAG CTAAATGCTACAGACTTTCGTCGGGCGGGGGCGCGGGGCGAGCGGCGGAA AGCAGCGAAGAGGATGGAAAAGAGGAGGAATCTTGGCGACGGGTATATTG TGCGATGCTCGTGCGTCTTGAGACGTTTTTTATCCCGGTGGAGCGGGTTG ACTCGAAGGAAAAGATGCAGGCAGCCGACGTTGTCACGGAAGTAAGAAAA AAACATAAAGGAAGAGGAAAAACACTTTCGTCCGAGAGGGCATCACCAGC CGAGGAAACTCGTGGAGTTCGCCATGATGGCTCTACTGAGCACCGCGACG CTCTAGCAGGTGCGACTTGCGAAATGATCGACCCTGTGGGTGACATATCA TCGGGCGTCGAGCCAGGATCGGCTGAAAGCATCGCGCGAGCGCTGGAAGG AGTACCCTCTGCGTTCGAGCACACTGTACCGTTTCACCTTGAAGACGATA ACATATTGTCCGCCGTTGCCAAGAAAGCGATACGATTACGAGGAGCGAGT CGACGAAGGTGGTTGATCGCCAATGCGCACCTCCTCCTCAGGGCAGGGAA GCGCCTATGTGATCGATGTCAGACGTCGCCGCCGAATACCACAGAAGCCA GATCCCCCACCGAGACTCCAGTTGGCCAGGCGAGGATTGTCAAGCTTCTG GTGGCAACCTTGCCCTTCAAGCAAGCTTCCACAGATGCGGACAACCCGAT CGAAGCATTTTTGGCGTGCACGCGGCGGGAGAGCGACCATCAGTCTTCTG TACTACCGCAGCCGTCCCTTGCCAACCCGGAGGCAACCGCTACGGTAACG ACGCATGGTGCGGAGATCGTGACCCCTGTACCGTGGAAAGCTTGCGTTGT CATGCAAGAAGCACTCTACAAACACCAGCTTTTGGCGCCGTGGGCCGCCG ACCCGCTCACAATGAAGCTAGCGACCGCCCTGGTTGAATCCGCCTGGAGC GTGCTCTCCCGCGGAGACGAACACTCCCTGACCGATCGGAGCGCGGAGGG TATCGTTCTGGAGCTTCGCGCGGTAGCACGGAGTCGCGGGTGGCGGGAGG AAGACGGGGTGGGTGTCAAGCACGCGGTTGCGGCGACCATCCGTCGCCTG CGGTTCCCGCTCGTGGCCGGATCGGTCCTCGGACACGCGCTGCCGCTGGC GTTGCCCCTTGTGGACGATCACGACGCCTCGCATCAAGCCGTAGGACTCT CCCTGTTGTTGCACATCGTGGCGGAGGCTACCCCCACGGAGCTTTCCTGG CACGCCCCACTGTTGCTGGAGGTTCTTGAGCAGGGTCTTCGGGGCGGGGG TTCGAGGGATCCGGCCGCTGCCATGTTGCGTCTAACTGTCGCGGTGAGAC TGTCGCGACACAACAGTACCTCCAAGGGGAGCGCTGCCTCTGTTGGGAGA GAAGGGTTTCGAATCGCGAGGGAAGCATTAGCGCAAGCGGGGAGGACTAA TGATGGAGAAGTCAGAATTGCCATGGTTTGCGGCGCGGCCGCTCTGTTGG AGCTTCCGGGGAACGGTGGTGGCTACGCGCCGTGTGAGCTTTTGCGGCCA GCTCTACTATGCCTACTTCCAATCCTCCAGGGGTACTGGTTGTCCGCCCT TCTGGTCGACGGCTGCCCTGAGGTGAAAGAGGCAGCGCGAGTCGCCTTTT GCTCCGCTACCTCTATCCCGCTTGACCACACCGTCCGAAACGCATCGCCA ACATCAGCCATAAGCTCATCGAGTGACTTAAGCATGATGGCAGCCGCATC CGCCCTAGTACGTGGTGCCTCCAATTTCCTCCGCGCGACTGTGGCAGCAA TCCAAGGGAAACGCGAAGGCGGAGGTGGAAACTCACGAGCGGTCGATATC GCGACCGAGGCCAGAACGCGCATGGCGTTCCGAGTTCTGCAAGGAGGAGT GGGTCTGATAGAGTCATCCGGATCGAGGGTAGGGGCGGAATCCTTAGGGA AGATCAAGCGGACACTGGTGGAAGCCATCGAAGTGATCGAAGCTTGGGTA TTGTACACGTTAAACAACATTCCTCCGACCTTGTTGCCTTGGGAAGAATG GAGTTCCACCACCGTGGATCATAACGGCGTCCTCGGGGGTAGTCTTTCCT CCGAAGTTCGTGACACGGCTCGGGCTCTCTTAGGAGGAGGTAGATGCAAC ATGAAATCGACCGCCACTGAAGCGGCAATAATTGCGGTAGAGGACTTCAG AGCTAAATGCTACAGACTTTCGTCGGGCGGGGGCGCGGGGCGAGCGGCGG AAAGCAGCGAAGAGGATGGAAAAGAGGAGGAATCTTGGCGACGGGTATAT TGTGCGATGCTCGTGCGTCTTGAGACGTTTTTTATCCCGGTGGAGCGGGT TGACTCGAAGGAAAAGATGCAGGCAGCCGACGTTGTCACGGAAGTAAGAA AAAAACATAAAGGAAGAGGAAAAACACTTTCGTCCGAGAGGGCATCACCA GCCGAGGAAACTCGTGGAGTTCGCCATGATGGCTCTACTGAGCACCGCGA CGCTCTAGCAGGTGCGACTTGCGAAATGATCGACCCTGTGGGTGACATAT CATCGGGCGTCGAGCCAGGATCGGCTGAAAGCATCGCGCGAGCGCTGGAA GGAGTACCCTCTGCGTTCGAGCACACTGTACCGTTTCACCTTGAAGACGA TAACATATTGTCCGCCGTTGCCAAGAAAGCGATACGATTACGAGGAGCGA GTCGACGAAGGTGGTTGATCGCCAATGCGCACCTCCTCCTCAGGGCAGGG AAGCGCCTATGTGATCGATGTCAGACGTCGCCGCCGAATACCACAGAAGC CAGATCCCCCACCGAGACTCCAGTTGGCCAGGCGAGGATTGTCAAGCTTC TGGTGGCAACCTTGCCCTTCAAGCAAGCTTCCACAGATGCGGACAACCCG ATCGAAGCATTTTTGGCGTGCACGCGGCGGGAGAGCGACCATCAGTCTTC TGTACTACCGCAGCCGTCCCTTGCCAACCCGGAGGCAACCGCTACGGTAA CGACGCATGGTGCGGAGATCGTGACCCCTGTACCGTGGAAAGCTTGCGTT GTCATGCAAGAAGCACTCTACAAACACCAGCTTTTGGCGCCGTGGGCCGC CGACCCGCTCACAATGAAGCTAGCGACCGCCCTGGTTGAATCCGCCTGGA GCGTGCTCTCCCGCGGAGACGAACACTCCCTGACCGATCGGAGCGCGGAG GGTATCGTTCTGGAGCTTCGCGCGGTAGCACGGAGTCGCGGGTGGCGGGA GGAAGACGGGGTGGGTGTCAAGCACGCGGTTGCGGCGACCATCCGTCGCC TGCGGTTCCCGCTCGTGGCCGGATCGGTCCTCGGACACGCGCTGCCGCTG GCGTTGCCCCTTGTGGACGATCACGACGCCTCGCATCAAGCCGTAGGACT CTCCCTGTTGTTGCACATCGTGGCGGAGGCTACCCCCACGGAGCTTTCCT GGCACGCCCCACTGTTGCTGGAGGTTCTTGAGCAGGGTCTTCGGGGCGGG GGTTCGAGGGATCCGGCCGCTGCCATGTTGCGTCTAACTGTCGCGGTGAG ACTGTCGCGACACAACAGTACCTCCAAGGGGAGCGCTGCCTCTGTTGGGA GAGAAGGGTTTCGAATCGCGAGGGAAGCATTAGCGCAAGCGGGGAGGACT AATGATGGAGAAGTCAGAATTGCCATGGTTTGCGGCGCGGCCGCTCTGTT GGAGCTTCCGGGGAACGGTGGTGGCTACGCGCCGTGTGAGCTTTTGCGGC CAGCTCTACTATGCCTACTTCCAATCCTCCAGCAGTCTTCTCCAATCTCC GCGAGGCTTGACGCTCGGGCGGCAACGCTCAGGGCGCTGAACGTGCTCTG TCGATCCTGCTGGCCCCGAGTGCACGCCCACGCCTCCAAGCTCCTGTGCG CCTTACTGTGGACGTGCGGCGACTGTTCCCGCCGAGCAGCTTTCGAGCTT GATACGACAGACGGTGGCAGAAAAGATGGCAAGACAACAGCGACCTTCTT ACGCTCGAGGGATGTAGACATCAAGGCAGCGGACGACGTCGTTCGCTCTC ACGCGGAAAGGCTCGGTGCCCTGGTGGTGCTGCTAGGGGGAAGCGCCGCC CGCGTGACGCTGAACGAGATCTGTGCCGCGGTGGGCGCGCTCCAGCCGGC CGCGGCGGCGATGCTGGATCTCGCTGACCAGTCTTCTCCAATCTCCGCGA GGCTTGACGCTCGGGCGGCAACGCTCAGGGCGCTGAACGTGCTCTGTCGA TCCTGCTGGCCCCGAGTGCACGCCCACGCCTCCAAGCTCCTGTGCGCCTT ACTGTGGACGTGCGGCGACTGTTCCCGCCGAGCAGCTTTCGAGCTTGATA CGACAGACGGTGGCAGAAAAGATGGCAAGACAACAGCGACCTTCTTACGC TCGAGGGATGTAGACATCAAGGCAGCGGACGACGTCGTTCGCTCTCACGC GGAAAGGCTCGGTGCCCTGGTGGTGCTGCTAGGGGGAAGCGCCGCCCGCG TGACGCTGAACGAGATCTGTGCCGCGGTGGGCGCGCTCCAGCCGGCCGCG GCGGCGATGCTGGATCTCGCTGAC back to top
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