prot_H-elongata_contig20464.5825.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20464.5825.1
Unique Nameprot_H-elongata_contig20464.5825.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length90
Homology
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BLAST of mRNA_H-elongata_contig20464.5825.1 vs. uniprot
Match: D8LN60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN60_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.430e-15
Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 0 
Query:    1 QAWWRAVCGGKRAAARLRSHGCDTIGKLYATC---ALGVTFTTNNEERKCIHAPVPSSRRRGGELRRWLGDQDLADKISSLLLRLALAIEKIR 90
            QAWWRAVCGGK AA RLR  GCDT+GKLY      A+G + ++++       A    +R R  +LRR + D DLA KI+SLL RL  A E++R
Sbjct:  984 QAWWRAVCGGKEAAKRLRDDGCDTVGKLYTYVRGSAVGCSSSSSSLAGCGDGAAPKKARSRTKKLRRLVNDDDLATKIASLLRRLMSAFEELR 1076
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20464.5825.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LN60_ECTSI1.430e-1549.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20464contigH-elongata_contig20464:738..1085 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20464.5825.1mRNA_H-elongata_contig20464.5825.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20464 738..1085 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20464.5825.1 ID=prot_H-elongata_contig20464.5825.1|Name=mRNA_H-elongata_contig20464.5825.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp
QAWWRAVCGGKRAAARLRSHGCDTIGKLYATCALGVTFTTNNEERKCIHA
PVPSSRRRGGELRRWLGDQDLADKISSLLLRLALAIEKIR
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