prot_H-elongata_contig204324.5814.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig204324.5814.1
Unique Nameprot_H-elongata_contig204324.5814.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
BLAST of mRNA_H-elongata_contig204324.5814.1 vs. uniprot
Match: A0A6H5KID0_9PHAE (Beta_elim_lyase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KID0_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 2.170e-21
Identity = 49/53 (92.45%), Postives = 50/53 (94.34%), Query Frame = 0
Query:    1 MAVSNEGFVAIMTSKESPRALKLVVTPDDPMSGGLDVEQAETSEARTLLQLMQ 53
            MAVS EGFVAIMTSKES RAL+LVVTPDDPMSGGLDVEQAET EARTLLQLMQ
Sbjct:  614 MAVSTEGFVAIMTSKESTRALRLVVTPDDPMSGGLDVEQAETPEARTLLQLMQ 666          
BLAST of mRNA_H-elongata_contig204324.5814.1 vs. uniprot
Match: A0A4D9CZ25_9STRA (Beta_elim_lyase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ25_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.190e-8
Identity = 35/64 (54.69%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    1 MAVSNEGFVAIMTSKE----------SPR-ALKLVVTPDDPMSGGLDVEQAETSEARTLLQLMQ 53
            ++ S  GFV ++  KE          SPR ALK+VVTP DPMS GLDV  AET EA TLLQL+Q
Sbjct:  551 VSTSARGFVVVLAEKEGEGQEGSEGGSPRKALKVVVTPSDPMSAGLDVHAAETPEAITLLQLLQ 614          
BLAST of mRNA_H-elongata_contig204324.5814.1 vs. uniprot
Match: K8Z7D4_NANGC (Threonine aldolase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z7D4_NANGC)

HSP 1 Score: 57.8 bits (138), Expect = 2.160e-8
Identity = 34/64 (53.12%), Postives = 40/64 (62.50%), Query Frame = 0
Query:    1 MAVSNEGFVAIMTSKES----------PR-ALKLVVTPDDPMSGGLDVEQAETSEARTLLQLMQ 53
            ++ S  GFV ++  KE           PR ALK+VVTP DPMS GLDV  AET EA TLLQL+Q
Sbjct:   87 VSTSERGFVVVLAEKEGEGQEGSEGGRPRKALKVVVTPSDPMSAGLDVHAAETPEAITLLQLLQ 150          
BLAST of mRNA_H-elongata_contig204324.5814.1 vs. uniprot
Match: A0A482SPV4_9ARCH (Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SPV4_9ARCH)

HSP 1 Score: 53.5 bits (127), Expect = 6.960e-7
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    1 MAVSNEGFVAIMTSKESPRALKLVVTPDDPMSGGLDVEQAETSEARTLLQLMQ 53
            M+VS++GF   +      R +K+ VTP DPM  GLD +QAE+SEA TLLQL+Q
Sbjct:  458 MSVSDQGFCVFLQGLICDRFVKVQVTPSDPMVYGLDRDQAESSEAVTLLQLLQ 510          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig204324.5814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KID0_9PHAE2.170e-2192.45Beta_elim_lyase domain-containing protein n=2 Tax=... [more]
A0A4D9CZ25_9STRA1.190e-854.69Beta_elim_lyase domain-containing protein n=3 Tax=... [more]
K8Z7D4_NANGC2.160e-853.13Threonine aldolase n=1 Tax=Nannochloropsis gaditan... [more]
A0A482SPV4_9ARCH6.960e-752.83Aminotransferase class I/II-fold pyridoxal phospha... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig204324contigH-elongata_contig204324:95..253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig204324.5814.1mRNA_H-elongata_contig204324.5814.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig204324 95..259 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig204324.5814.1 ID=prot_H-elongata_contig204324.5814.1|Name=mRNA_H-elongata_contig204324.5814.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
MAVSNEGFVAIMTSKESPRALKLVVTPDDPMSGGLDVEQAETSEARTLLQ
LMQ
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