prot_H-elongata_contig203510.5781.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig203510.5781.1
Unique Nameprot_H-elongata_contig203510.5781.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
BLAST of mRNA_H-elongata_contig203510.5781.1 vs. uniprot
Match: D7G0F6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0F6_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 3.560e-36
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0
Query:    1 RWKVDFEKNVVVSNFERRGWTKTDGDDWNVYWANVYSVKQLFNPETGFRLGDDQ 54
            RWKVDFEKNVVVSNFERRGWTKTDGDDWNVYWANVYSVKQLFNPETGFRLGDDQ
Sbjct:   15 RWKVDFEKNVVVSNFERRGWTKTDGDDWNVYWANVYSVKQLFNPETGFRLGDDQ 68          
BLAST of mRNA_H-elongata_contig203510.5781.1 vs. uniprot
Match: A0A6H5J8A0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8A0_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 1.080e-32
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0
Query:    1 RWKVDFEKNVVVSNFERRGWTKTDGDDWNVYWANVYSVKQLFNPETGFRLGDDQ 54
            RWKVDFEKNVVVSNFERRGWTKTDGDDWNVYWANVYSVKQLFNPETGFRLGDDQ
Sbjct:   15 RWKVDFEKNVVVSNFERRGWTKTDGDDWNVYWANVYSVKQLFNPETGFRLGDDQ 68          
BLAST of mRNA_H-elongata_contig203510.5781.1 vs. uniprot
Match: A0A835Z6J2_9STRA (Tubulin-tyrosine ligase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J2_9STRA)

HSP 1 Score: 108 bits (271), Expect = 8.410e-27
Identity = 45/53 (84.91%), Postives = 49/53 (92.45%), Query Frame = 0
Query:    2 WKVDFEKNVVVSNFERRGWTKTDGDDWNVYWANVYSVKQLFNPETGFRLGDDQ 54
            W+ DFEKNVVVSNF RRGWTKT+GDDWN+YWANVY+VKQLFNPETG RL DDQ
Sbjct:   11 WRADFEKNVVVSNFARRGWTKTEGDDWNIYWANVYNVKQLFNPETGQRLRDDQ 63          
BLAST of mRNA_H-elongata_contig203510.5781.1 vs. uniprot
Match: A0A2P4XLN3_9STRA (Tubulin-tyrosine ligase family n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XLN3_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.500e-22
Identity = 40/54 (74.07%), Postives = 46/54 (85.19%), Query Frame = 0
Query:    1 RWKVDFEKNVVVSNFERRGWTKTDGDDWNVYWANVYSVKQLFNPETGFRLGDDQ 54
            RW+VD EKNVVV NFERRGWTKT+GDDWN+YWA+  S+K +FNPETG RL D Q
Sbjct:  160 RWRVDAEKNVVVWNFERRGWTKTEGDDWNIYWASKTSIKNMFNPETGIRLVDGQ 213          
BLAST of mRNA_H-elongata_contig203510.5781.1 vs. uniprot
Match: A0A067BKD1_SAPPC (Uncharacterized protein n=10 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BKD1_SAPPC)

HSP 1 Score: 96.3 bits (238), Expect = 3.130e-22
Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = 0
Query:    1 RWKVDFEKNVVVSNFERRGWTKTDGDDWNVYWANVYSVKQLFNPETGFRLGDDQ 54
            +WKVD EK+VVV NFERRGW +TDG+DWNVYWAN  S+K +FNPE+G RLGD Q
Sbjct:   11 KWKVDSEKHVVVWNFERRGWQRTDGNDWNVYWANKVSIKSMFNPESGIRLGDGQ 64          
BLAST of mRNA_H-elongata_contig203510.5781.1 vs. uniprot
Match: A0A6A3WFX3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3WFX3_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 6.340e-22
Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    2 WKVDFEKNVVVSNFERRGWTKTDGDDWNVYWANVYSVKQLFNPETGFRLGDDQ 54
            W+VD EKNVVV NFERRGWTKT+GDDWN++WAN  ++K +FNPE G RL D Q
Sbjct:   16 WRVDSEKNVVVWNFERRGWTKTEGDDWNIFWANKTTIKNMFNPENGVRLVDGQ 68          
BLAST of mRNA_H-elongata_contig203510.5781.1 vs. uniprot
Match: G5A1Y3_PHYSP (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=G5A1Y3_PHYSP)

HSP 1 Score: 95.9 bits (237), Expect = 6.670e-22
Identity = 39/54 (72.22%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 RWKVDFEKNVVVSNFERRGWTKTDGDDWNVYWANVYSVKQLFNPETGFRLGDDQ 54
            RW+VD EKNVVV NFERRGWTKT+GDDWN+YWAN  ++K +FNPE G RL D Q
Sbjct:   43 RWRVDSEKNVVVWNFERRGWTKTEGDDWNIYWANKTAIKNMFNPENGVRLVDGQ 96          
BLAST of mRNA_H-elongata_contig203510.5781.1 vs. uniprot
Match: A0A7S3MKX9_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3MKX9_9SPIT)

HSP 1 Score: 90.9 bits (224), Expect = 6.860e-22
Identity = 36/55 (65.45%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    1 RWKVDFEKNVVVSNFERRGWTKTDGD-DWNVYWANVYSVKQLFNPETGFRLGDDQ 54
            +WK DF+K+V+  NFE+RGW K  GD DWN+YWAN ++VKQ+FNPETGFRLG+ Q
Sbjct:    8 KWKSDFDKSVLTLNFEKRGWVKATGDEDWNIYWANPWTVKQIFNPETGFRLGETQ 62          
BLAST of mRNA_H-elongata_contig203510.5781.1 vs. uniprot
Match: A0A7S3JFN2_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3JFN2_9SPIT)

HSP 1 Score: 89.7 bits (221), Expect = 1.300e-21
Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 RWKVDFEKNVVVSNFERRGWTK-TDGDDWNVYWANVYSVKQLFNPETGFRLGDDQ 54
            +WK DF+K  ++ NFE+RGW K T  DDWN+YWANV++VKQ+FNPETG RLG+ Q
Sbjct:    8 KWKSDFDKQCIIHNFEKRGWLKCTSDDDWNIYWANVWNVKQIFNPETGHRLGETQ 62          
BLAST of mRNA_H-elongata_contig203510.5781.1 vs. uniprot
Match: A0A418FU72_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FU72_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.370e-21
Identity = 37/54 (68.52%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 RWKVDFEKNVVVSNFERRGWTKTDGDDWNVYWANVYSVKQLFNPETGFRLGDDQ 54
            +WKVD EK+VVV NFERRGW KT+G DWN+YWAN  S+K +FNPE G RL D Q
Sbjct:    6 KWKVDSEKHVVVWNFERRGWQKTEGSDWNIYWANKQSIKSMFNPENGVRLTDGQ 59          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig203510.5781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0F6_ECTSI3.560e-36100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8A0_9PHAE1.080e-32100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z6J2_9STRA8.410e-2784.91Tubulin-tyrosine ligase family-domain-containing p... [more]
A0A2P4XLN3_9STRA2.500e-2274.07Tubulin-tyrosine ligase family n=1 Tax=Phytophthor... [more]
A0A067BKD1_SAPPC3.130e-2272.22Uncharacterized protein n=10 Tax=Saprolegniaceae T... [more]
A0A6A3WFX3_9STRA6.340e-2269.81Uncharacterized protein n=3 Tax=Phytophthora fraga... [more]
G5A1Y3_PHYSP6.670e-2272.22Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]
A0A7S3MKX9_9SPIT6.860e-2265.45Hypothetical protein (Fragment) n=1 Tax=Favella eh... [more]
A0A7S3JFN2_9SPIT1.300e-2163.64Hypothetical protein (Fragment) n=1 Tax=Euplotes h... [more]
A0A418FU72_9STRA1.370e-2168.52Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027750Tubulin polyglutamylase TTLL1PANTHERPTHR12241:SF31TUBULIN POLYGLUTAMYLASE TTLL1-RELATEDcoord: 2..54
NoneNo IPR availablePANTHERPTHR12241TUBULIN TYROSINE LIGASE-RELATEDcoord: 2..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig203510contigH-elongata_contig203510:445..1063 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig203510.5781.1mRNA_H-elongata_contig203510.5781.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig203510 445..1063 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig203510.5781.1 ID=prot_H-elongata_contig203510.5781.1|Name=mRNA_H-elongata_contig203510.5781.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
RWKVDFEKNVVVSNFERRGWTKTDGDDWNVYWANVYSVKQLFNPETGFRL
GDDQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027750TTLL1