prot_H-elongata_contig20306.5762.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig20306.5762.1
Unique Nameprot_H-elongata_contig20306.5762.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length734
Homology
BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: D8LKC4_ECTSI (Bromo domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKC4_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 9.070e-80
Identity = 250/552 (45.29%), Postives = 294/552 (53.26%), Query Frame = 0
Query:    1 MMEAIKVNLPRFDQCISLLRTEIDELRDGKLDHRLREVIAIPLIDPSLHSALSKAIDGGLLLPPAPELSDSEDELVWREXXXXXXXXXXXXXXXXXXXXXXXXXXAYAXXXXXXXXXXXXSGGEKEREMSKEGRAGELLKDRSHRRGERNLGEAKWRRDGNVDRGQDDATIPTATAAANKSKDRTPQCTERVIKANGLTSSILKPPDGDDGRSLVSHNGTQVESNGSPLRDRPPILSGGGSRVAPAAPPPTPQPPLSSHRANSGVIGSCHGRNDSDRDDALEDCGIGEDERWNGGMREGGEQGTGSGIRQIASKTASV-TPETKSAKKNPGGDDPIGEMNGNEANGWSSSKRGRKRPRTAEGTSSEASSRLRMPQPR----------RQGESPEEGEGGDDNKEGRAKDDTKTVKRERADSVNVEHFRRIALEVWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEIISEARRPGFVTADPGFDSIVAGTRTSRARQ 541
            MME I+ NLPRFDQCISLL+ EI E++ GK DHRLREV A+P+ DP+LHSAL+ A++GGL LP AP LSDS        XXXXXXXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXX     E E   EG +G                               +A+I  A A+                                         G   +S+GS   D      GGG                                                            ++G+          T +V  P  KS KK  G         G E  G S+SKRGRKRPR     S+E S+R R P+ R                 +G+ G+D  E   +      K+ERADSV+  HFRRIALEVW+RVY+HKFAIIFRK VNPKDAPGYE++I++PMDL LI++RIMSGAL+SLDD+SRD  VMCNNAMVFNGK DPYFDYSKELRT+A+E+I EARRPGFVTADPGFDS+VAG RTSRARQ
Sbjct:   11 MMEEIETNLPRFDQCISLLQAEIGEIKAGKHDHRLREVAAMPVPDPNLHSALTSAVEGGLQLPAAPRLSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHPEHE---EGDSGS------------------------------NASIRAAWAS-----------------------------------------GAADDSDGSXXXDERKATGGGGV-----------------------------------------------------------DRGSSXXXXXXXXXTPAVGAPGPKSGKKKSGTGGGRANQQG-EDTGSSASKRGRKRPRVVGDGSAEQSARDRRPRSRGTXXXXXXXXXXXXXXXDGKRGEDGLEEEQR------KKERADSVDAAHFRRIALEVWDRVYRHKFAIIFRKAVNPKDAPGYEEIIKEPMDLSLIRERIMSGALLSLDDMSRDLCVMCNNAMVFNGKDDPYFDYSKELRTYANEVIEEARRPGFVTADPGFDSVVAGARTSRARQ 422          
BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: A0A7S1ZNS7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZNS7_TRICV)

HSP 1 Score: 82.0 bits (201), Expect = 1.270e-13
Identity = 40/103 (38.83%), Postives = 61/103 (59.22%), Query Frame = 0
Query:  421 LEVWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASE-IISEARRPGFVT 522
            L  W+R+  H+ A +FRKPVNP++APGY   I  P+DL LI++ I  G + S  DL R   ++C+N + +NG+   Y   ++E   +A + II   +R G  T
Sbjct:  135 LACWKRISNHRSAAVFRKPVNPREAPGYTDRILFPIDLSLIRKMIAGGYVESFQDLHRRIGLICHNCVKYNGRESDYGVVAREFEAYADDSIIDAVQRVGEAT 237          
BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: K0SQI0_THAOC (Bromo domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQI0_THAOC)

HSP 1 Score: 79.0 bits (193), Expect = 4.110e-12
Identity = 39/119 (32.77%), Postives = 62/119 (52.10%), Query Frame = 0
Query:  419 IALEVWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEIISEARRPGFVTADPGFDSIVAGTRTS 537
            + L +W+++  H+ A +FRK VNP +APGY + I  PMDL LI++ I  G + S+  L     ++C+N   FNG+   Y   ++E      + + EA R   V       +   GT T+
Sbjct:  212 VLLALWKKISAHRTAAVFRKAVNPAEAPGYAERIEFPMDLSLIRRMIQGGLIKSISSLHLRLGLICHNCCKFNGRESDYARLTREFEEMVDDKVLEATRHAAVVEVKTAAATAKGTGTA 330          
BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: A0A1Y1UZ18_9FUNG (Bromodomain-containing protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1UZ18_9FUNG)

HSP 1 Score: 73.2 bits (178), Expect = 9.200e-12
Identity = 30/94 (31.91%), Postives = 52/94 (55.32%), Query Frame = 0
Query:  423 VWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEIISEAR 516
            +W  +  H++  +F  PV  +DAP Y  +I+KPMDL  IKQR+  G + +  +  RD  +MC N++++N +    +  + E++  A   I   R
Sbjct:    2 IWNDIANHRYGPVFLNPVKVEDAPDYYDIIKKPMDLNSIKQRVKDGIITNTIEFHRDVMLMCTNSLMYNQEDSEVYPMALEMKEHADHEIKNLR 95          
BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: A0A1Y3NRF6_PIRSE (Bromo domain-containing protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NRF6_PIRSE)

HSP 1 Score: 75.1 bits (183), Expect = 1.940e-11
Identity = 32/101 (31.68%), Postives = 56/101 (55.45%), Query Frame = 0
Query:  416 FRRIALEVWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEIISEAR 516
            +R+  + +W  +  H++  +F  PV  +DAP Y  +I+KPMDL  IKQR+  G + S  +  RD  +MC N++++N +    +  + E++  A   I   R
Sbjct:   98 WRKNIMMIWNDIANHRYGPVFLNPVKVEDAPDYYDIIKKPMDLNSIKQRVKDGIITSTIEFHRDVMLMCTNSLMYNQEDSEVYPMALEMKEHADHEIKNLR 198          
BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: A0A7S4ALL3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ALL3_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.330e-11
Identity = 33/92 (35.87%), Postives = 61/92 (66.30%), Query Frame = 0
Query:  421 LEVWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEII 512
            L VW+++Y H+ +++FR+PVNPK+APGY   IR PMDL LI++ I+S  + + + + +   ++ +N + +NG+   Y   ++E  + A+E +
Sbjct:  347 LAVWKKLYMHRSSLVFRRPVNPKEAPGYTDRIRFPMDLSLIRKLILSRHVRNYEGILKQVHLIGHNCVKYNGRESDYALVTREFESVATEYV 438          
BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: A0A7R9VBG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VBG6_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.050e-11
Identity = 33/95 (34.74%), Postives = 58/95 (61.05%), Query Frame = 0
Query:  421 LEVWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEIISEA 515
            L  W+R+  H+ A +FRK VNP++APGY + I  P+DL  I++ I +G + S   L R   ++C+N + +NG+   Y   ++E  ++A + + +A
Sbjct:   64 LACWKRISNHRSAAVFRKAVNPREAPGYTERILFPIDLASIRKTISAGHVDSFVRLHRRIGLICHNCVKYNGRESDYGLVAREFESYADDAVIDA 158          
BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: A0A197JW83_9FUNG (Bromo domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JW83_9FUNG)

HSP 1 Score: 77.0 bits (188), Expect = 7.570e-11
Identity = 31/97 (31.96%), Postives = 58/97 (59.79%), Query Frame = 0
Query:  416 FRRIALEVWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEII 512
            +++I + +W  +  H++  +F +P+   DAPGY  +I++PMDL  IK+RI  G + + D+  RD  +M  NA+++NG+    +  +  + T   +II
Sbjct:  552 WKKILMMIWTEITNHRYGAVFMQPIKEHDAPGYYLMIKRPMDLKSIKERIRDGQITNADEFHRDVLLMFMNALMYNGEDTEVYQMAMAMMTEVEQII 648          
BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: A0A1Y2BRH2_9FUNG (Bromodomain-containing protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2BRH2_9FUNG)

HSP 1 Score: 70.1 bits (170), Expect = 1.220e-10
Identity = 31/97 (31.96%), Postives = 54/97 (55.67%), Query Frame = 0
Query:  423 VWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGA---LMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEIISEAR 516
            +W  +  H++  +F  PV  +DAP Y ++I+KPMDL  IKQR+  G    + S  +  RD  +MC N++++N +    +  + E++  A + I   R
Sbjct:    2 IWNDIANHRYGPVFLNPVKEEDAPDYYEIIKKPMDLNSIKQRVKDGVTIVIKSTIEFHRDVMLMCTNSIMYNQEDSEVYPMAIEMKKHADDRIKTLR 98          
BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Match: A0A397J629_9GLOM (Bromo domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397J629_9GLOM)

HSP 1 Score: 76.3 bits (186), Expect = 1.260e-10
Identity = 33/102 (32.35%), Postives = 58/102 (56.86%), Query Frame = 0
Query:  416 FRRIALEVWERVYKHKFAIIFRKPVNPKDAPGYEKVIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDYSKELRTFASEIISEARR 517
            ++++   + + +  H++A +F+ P+  +DAPGY  ++++PMDL  +K+R+  G +   D   RD  +M  NA VFN K       + E++ F    ISE RR
Sbjct:  543 WQKLVAMILQEISNHRYASVFQNPIREQDAPGYYDIVKQPMDLRTLKKRLRDGIVHDTDQFHRDLMLMFMNASVFNRKETDIHQMATEMKDFVENQISEFRR 644          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig20306.5762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKC4_ECTSI9.070e-8045.29Bromo domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S1ZNS7_TRICV1.270e-1338.83Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
K0SQI0_THAOC4.110e-1232.77Bromo domain-containing protein n=1 Tax=Thalassios... [more]
A0A1Y1UZ18_9FUNG9.200e-1231.91Bromodomain-containing protein n=1 Tax=Piromyces f... [more]
A0A1Y3NRF6_PIRSE1.940e-1131.68Bromo domain-containing protein n=1 Tax=Piromyces ... [more]
A0A7S4ALL3_9STRA2.330e-1135.87Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7R9VBG6_9STRA3.050e-1134.74Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A197JW83_9FUNG7.570e-1131.96Bromo domain-containing protein n=1 Tax=Linnemanni... [more]
A0A1Y2BRH2_9FUNG1.220e-1031.96Bromodomain-containing protein n=1 Tax=Neocallimas... [more]
A0A397J629_9GLOM1.260e-1032.35Bromo domain-containing protein n=1 Tax=Diversispo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 479..498
score: 26.63
coord: 431..444
score: 32.14
coord: 461..479
score: 22.77
coord: 445..461
score: 48.72
IPR001487BromodomainSMARTSM00297bromo_6coord: 409..517
e-value: 4.4E-25
score: 99.3
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 422..501
e-value: 4.7E-17
score: 61.8
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 428..498
score: 15.59
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 384..518
e-value: 3.6E-28
score: 100.0
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 399..515
NoneNo IPR availablePANTHERPTHR15398BROMODOMAIN-CONTAINING PROTEIN 8coord: 326..625
NoneNo IPR availablePANTHERPTHR15398:SF4BROMODOMAIN CONTAINING 8coord: 326..625

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig20306contigH-elongata_contig20306:1091..5422 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig20306.5762.1mRNA_H-elongata_contig20306.5762.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig20306 1075..6062 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig20306.5762.1 ID=prot_H-elongata_contig20306.5762.1|Name=mRNA_H-elongata_contig20306.5762.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=734bp
MMEAIKVNLPRFDQCISLLRTEIDELRDGKLDHRLREVIAIPLIDPSLHS
ALSKAIDGGLLLPPAPELSDSEDELVWREEEEAVEEETVEKEADNGAEEE
EEDGAAYADGKGAAAGGGVASGGEKEREMSKEGRAGELLKDRSHRRGERN
LGEAKWRRDGNVDRGQDDATIPTATAAANKSKDRTPQCTERVIKANGLTS
SILKPPDGDDGRSLVSHNGTQVESNGSPLRDRPPILSGGGSRVAPAAPPP
TPQPPLSSHRANSGVIGSCHGRNDSDRDDALEDCGIGEDERWNGGMREGG
EQGTGSGIRQIASKTASVTPETKSAKKNPGGDDPIGEMNGNEANGWSSSK
RGRKRPRTAEGTSSEASSRLRMPQPRRQGESPEEGEGGDDNKEGRAKDDT
KTVKRERADSVNVEHFRRIALEVWERVYKHKFAIIFRKPVNPKDAPGYEK
VIRKPMDLGLIKQRIMSGALMSLDDLSRDFFVMCNNAMVFNGKGDPYFDY
SKELRTFASEIISEARRPGFVTADPGFDSIVAGTRTSRARQTSTSSSPAA
LAQSAPRGRGKKKRQNGVGSVCGRRSSRESDSTSVADDTGDEERKVLRGG
GREDGSANGVKRKGKSVNVAARENNKKSGGRRGTKHHARSKTEIVGMSLG
EDDDIGGRRKDGRESASGSRNPSERGAGRKRAAAGKGKRRAKGGMVGSSD
EDRSARGKVRKAAKTAAKRTPTSNAGSSKKRAH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf