mRNA_H-elongata_contig2025.5737.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig2025.5737.1 vs. uniprot
Match: A0A6H5JBJ7_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ7_9PHAE) HSP 1 Score: 329 bits (843), Expect = 3.430e-111 Identity = 160/252 (63.49%), Postives = 191/252 (75.79%), Query Frame = 1
Query: 1 MSFGVQDNSWCDAREWTLWISESWRIRPNIGSIITQRPSILVLDDFKCHRDEAFITDLWKRCNTSVILIPGGLTPLLQPLDRMLNKQMKRLVRGKYTAYTATAVADSTTGKLKPPGRGMVSTWCKEAWAAITSDVIKTCFKICGLTRALDGSEDHAWCMHNFGEGYHKLPQKQRVAWEEAHPGVSLPPLQLPEIPNGEPIGTNPITAAEKEVQGRLLPPTGGNESNSDVELLEYDSDLECLGLSGGGEKKGE 756
MSFGVQ+ SW D RE WIS SW++RPN GSII QR ILVLDDFKCH+ E FI L + NT VI IPGG TPLLQPLDRMLNKQMKRL+RGKYTAY+A+AVAD+ +GKLKPP RG+VSTWCK+AW +IT + +KTCFKICGLT ALDGSEDHAWC HNFGE Y L ++Q W HP V+LPPL+LP++P G +NPITAA+KEV+G+LLP +ES+S+VE+ E GGG+ +GE
Sbjct: 1 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIIQQRLCILVLDDFKCHKGEGFIAPLKRDANTIVIFIPGGWTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKKAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVWLAEHPDVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVA-DESDSEVEVSEXXXXXXXXXXQGGGDAEGE 249
BLAST of mRNA_H-elongata_contig2025.5737.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE) HSP 1 Score: 325 bits (833), Expect = 2.990e-108 Identity = 158/251 (62.95%), Postives = 190/251 (75.70%), Query Frame = 1
Query: 1 MSFGVQDNSWCDAREWTLWISESWRIRPNIGSIITQRPSILVLDDFKCHRDEAFITDLWKRCNTSVILIPGGLTPLLQPLDRMLNKQMKRLVRGKYTAYTATAVADSTTGKLKPPGRGMVSTWCKEAWAAITSDVIKTCFKICGLTRALDGSEDHAWCMHNFGEGYHKLPQKQRVAWEEAHPGVSLPPLQLPEIPNGEPIGTNPITAAEKEVQGRLLPPTGGNESNSDVELLEYDSDLECLGLSGGGEKKG 753
MSFGVQ+ SW D RE WIS SW++RPN GSI+ QRP ILVLDD KCH+ E FI L + NT VI IPGGLTPLLQPLDRMLNKQMKRL+RGKYTAY+ +AVAD+ +GKLKPP RG+VSTWCKEAW +IT + +K+CFKICGLT ALDGSEDHAWC H+FGE H L ++Q W HP V+LPPL+LP++P G +NPITAA+KEV+G+LLP +ES+S+VE+LE GGG +G
Sbjct: 98 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKSCFKICGLTLALDGSEDHAWCDHDFGEDSHDLLEEQHAVWLAEHPDVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVA-DESDSEVEVLEGXXXXXXXXXQGGGGAEG 345
BLAST of mRNA_H-elongata_contig2025.5737.1 vs. uniprot
Match: A0A6H5L8W0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W0_9PHAE) HSP 1 Score: 322 bits (824), Expect = 7.410e-108 Identity = 157/252 (62.30%), Postives = 188/252 (74.60%), Query Frame = 1
Query: 1 MSFGVQDNSWCDAREWTLWISESWRIRPNIGSIITQRPSILVLDDFKCHRDEAFITDLWKRCNTSVILIPGGLTPLLQPLDRMLNKQMKRLVRGKYTAYTATAVADSTTGKLKPPGRGMVSTWCKEAWAAITSDVIKTCFKICGLTRALDGSEDHAWCMHNFGEGYHKLPQKQRVAWEEAHPGVSLPPLQLPEIPNGEPIGTNPITAAEKEVQGRLLPPTGGNESNSDVELLEYDSDLECLGLSGGGEKKGE 756
MSFGVQ+ SW D RE WIS SW+ RPN GSI+ QRP ILVLDDFKC +DE FI L + NT I IPGGLTPLLQPLDR+LNKQMKR++RGKYTAY+A+AVAD+ +GKLKPP RG+VSTWC EAW +I + +KTCFKICGLT ALDG EDHAW HNFGE Y L ++Q W HP +LPPL+LPE+P G NPIT A+KEV+ +L+P +ES S+VE+LE DSD+E + GGG +GE
Sbjct: 1 MSFGVQEKSWSDQRECNGWISGSWKFRPNNGSIVQQRPCILVLDDFKCRKDEGFIAALKRDANTIAIFIPGGLTPLLQPLDRVLNKQMKRMLRGKYTAYSASAVADARSGKLKPPERGVVSTWCTEAWESIIPETVKTCFKICGLTLALDGREDHAWREHNFGEDYRDLLEEQHAVWLAEHPDATLPPLKLPEVPGG--FDFNPITGAQKEVEEKLMPYVA-DESASEVEVLEGDSDVEVVEGQGGGGAEGE 249
BLAST of mRNA_H-elongata_contig2025.5737.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 327 bits (837), Expect = 3.180e-107 Identity = 160/252 (63.49%), Postives = 190/252 (75.40%), Query Frame = 1
Query: 1 MSFGVQDNSWCDAREWTLWISESWRIRPNIGSIITQRPSILVLDDFKCHRDEAFITDLWKRCNTSVILIPGGLTPLLQPLDRMLNKQMKRLVRGKYTAYTATAVADSTTGKLKPPGRGMVSTWCKEAWAAITSDVIKTCFKICGLTRALDGSEDHAWCMHNFGEGYHKLPQKQRVAWEEAHPGVSLPPLQLPEIPNGEPIGTNPITAAEKEVQGRLLPPTGGNESNSDVELLEYDSDLECLGLSGGGEKKGE 756
MSFGVQ+ SW D RE WIS SW++RPN GSI+ QRP ILVLDDFKCH+DE FI L + NT VI IPG LTPLLQPLDRMLNKQMKRL+R KYTAY+A+AVAD+ +GKLKPP RG+VSTWCKEAW + T + +KTCF ICGLT ALDGSEDHAWC HNFGE Y L ++QR W H V+LPPL+LP++P G +NPITAA+KEV+G+LLP +ES+S+VE+LE GGG +GE
Sbjct: 217 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVA-DESDSEVEVLEGXXXXXXXXXQGGGGAEGE 465
BLAST of mRNA_H-elongata_contig2025.5737.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE) HSP 1 Score: 311 bits (796), Expect = 8.800e-103 Identity = 146/218 (66.97%), Postives = 173/218 (79.36%), Query Frame = 1
Query: 1 MSFGVQDNSWCDAREWTLWISESWRIRPNIGSIITQRPSILVLDDFKCHRDEAFITDLWKRCNTSVILIPGGLTPLLQPLDRMLNKQMKRLVRGKYTAYTATAVADSTTGKLKPPGRGMVSTWCKEAWAAITSDVIKTCFKICGLTRALDGSEDHAWCMHNFGEGYHKLPQKQRVAWEEAHPGVSLPPLQLPEIPNGEPIGTNPITAAEKEVQGRLLP 654
MSFGVQ+ SW D RE W S SW++RPN GSI+ QRP ILVLDDFKCH+DE FI L + NT VI IPGGLTPLLQPLD LNKQMKRL+RGK+TAY+++AVAD+ +GKLKPP RG+VSTWCKE W +IT + +KTCFKICGLT ALDGSEDHAWC HNFGE Y L ++Q W HP V+LPPL+LP++P G +NPITAA+KEV+G+LLP
Sbjct: 62 MSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLD--LNKQMKRLLRGKHTAYSSSAVADARSGKLKPPERGIVSTWCKEEWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLP 275
BLAST of mRNA_H-elongata_contig2025.5737.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 317 bits (812), Expect = 3.900e-102 Identity = 148/230 (64.35%), Postives = 179/230 (77.83%), Query Frame = 1
Query: 1 MSFGVQDNSWCDAREWTLWISESWRIRPNIGSIITQRPSILVLDDFKCHRDEAFITDLWKRCNTSVILIPGGLTPLLQPLDRMLNKQMKRLVRGKYTAYTATAVADSTTGKLKPPGRGMVSTWCKEAWAAITSDVIKTCFKICGLTRALDGSEDHAWCMHNFGEGYHKLPQKQRVAWEEAHPGVSLPPLQLPEIPNGEPIGTNPITAAEKEVQGRLLPPTGGNESNSDVE 690
MSFGVQ+ SWCD RE+ LWI +SW++RPN GS++ QR ILVLDDFKCH+D+ FI L + NT VI IPGGLTPLLQPLDRMLNKQMKRL+RG YTA+TA A D TGKL PPGRG V+TWCK AWA+IT + +KTCFKICGLT ALDGSEDHAWC+HNFG+GY +L ++QRV W HP V+LPPLQLP++P N I AA KE++ LLP G++S+ ++E
Sbjct: 330 MSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAES--TANHIEAAAKELEAGLLP--RGDDSDIEIE 555
BLAST of mRNA_H-elongata_contig2025.5737.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 314 bits (805), Expect = 5.290e-101 Identity = 149/230 (64.78%), Postives = 177/230 (76.96%), Query Frame = 1
Query: 1 MSFGVQDNSWCDAREWTLWISESWRIRPNIGSIITQRPSILVLDDFKCHRDEAFITDLWKRCNTSVILIPGGLTPLLQPLDRMLNKQMKRLVRGKYTAYTATAVADSTTGKLKPPGRGMVSTWCKEAWAAITSDVIKTCFKICGLTRALDGSEDHAWCMHNFGEGYHKLPQKQRVAWEEAHPGVSLPPLQLPEIPNGEPIGTNPITAAEKEVQGRLLPPTGGNESNSDVE 690
MSFGVQ+ SWCD RE LWI +SW++RPN GSI+ QR ILVLDDFKCH+D+ FI L + NT VI IPGGLTPLLQPLDRMLNKQMKRL+RG YTA+TA A D TGKL PPGRG V+TWCK AWA+IT + KTCFKICGLT ALDGSEDHAWC+HNFG+GY +L ++QRV W HP V+LPPLQLP++P N I AA KE++ LLP G++S+ ++E
Sbjct: 337 MSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAES--TANHIEAAAKELEAGLLP--RGDDSDIEIE 562
BLAST of mRNA_H-elongata_contig2025.5737.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 303 bits (775), Expect = 2.780e-98 Identity = 156/285 (54.74%), Postives = 186/285 (65.26%), Query Frame = 1
Query: 1 MSFGVQDNSWCDAREWTLWISESWRIRPNIGSIITQRPSILVLDDFKCHRDEAFITDLWKRCNTSVILIPGGLTPLLQPLDRMLNKQMKRLVRGKYTAYTATAVADSTTGKLKPPGRGMVSTWCKEAWAAITSDVIKTCFKICGLTRALDGSEDHAWCMHNFGEGYHKLPQKQRVAWEEAHPGVSLPPLQLPEIPNGEP---------------------------------IGTNPITAAEKEVQGRLLPPTGGNESNSDVELLEYDSDLECLGLSGGGEKKGE 756
MSFGVQ+ SW D RE W S SW++RPN GSI+ QRP ILVLDDFKCH+DE FI L + NT VI IPGGLTPLLQPLDRMLNKQ KRL+R KYTAY+A+A D+ +GKLKPP RG+VSTWCK AW +IT + +KTCFKICGLT ALDGSEDHAWC HNFGE Y L ++Q W HP V+LPPL+LP++P +NPI AA+KEV+G+LLP +ES+S+VE+LE GGG +GE
Sbjct: 151 MSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASAT-DARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDSNPIMAAQKEVEGKLLPYVP-DESDSEVEVLEGXXXXXXXXXQGGGGAEGE 433
BLAST of mRNA_H-elongata_contig2025.5737.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE) HSP 1 Score: 304 bits (778), Expect = 1.290e-96 Identity = 145/227 (63.88%), Postives = 172/227 (75.77%), Query Frame = 1
Query: 10 GVQDNSWCDAREWTLWISESWRIRPNIGSIITQRPSILVLDDFKCHRDEAFITDLWKRCNTSVILIPGGLTPLLQPLDRMLNKQMKRLVRGKYTAYTATAVADSTTGKLKPPGRGMVSTWCKEAWAAITSDVIKTCFKICGLTRALDGSEDHAWCMHNFGEGYHKLPQKQRVAWEEAHPGVSLPPLQLPEIPNGEPIGTNPITAAEKEVQGRLLPPTGGNESNSDVE 690
GVQ+ SWCD RE LWI +SW++RPN GSI+ QR ILVLDDFKCH+D+ FI L K NT VI IPGGLTPLLQPLDRMLNKQMKRL+RG YTA TA A D TG L PPGRG V+TWCK AWA+IT + +KTCFKICGLT ALDGSEDHAWC+HNFG+GY +L ++QRV W HP V+LP LQLP++P N I AA KE++ LLP G++S+ ++E
Sbjct: 370 GVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTANTAKAARDPKTGNLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPTLQLPKVPAES--TANHIEAAAKELEAGLLP--CGDDSDIEIE 592
BLAST of mRNA_H-elongata_contig2025.5737.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE) HSP 1 Score: 302 bits (774), Expect = 1.800e-95 Identity = 151/246 (61.38%), Postives = 181/246 (73.58%), Query Frame = 1
Query: 19 DNSWCDAREWTLWISESWRIRPNIGSIITQRPSILVLDDFKCHRDEAFITDLWKRCNTSVILIPGGLTPLLQPLDRMLNKQMKRLVRGKYTAYTATAVADSTTGKLKPPGRGMVSTWCKEAWAAITSDVIKTCFKICGLTRALDGSEDHAWCMHNFGEGYHKLPQKQRVAWEEAHPGVSLPPLQLPEIPNGEPIGTNPITAAEKEVQGRLLPPTGGNESNSDVELLEYDSDLECLGLSGGGEKKGE 756
+ SW D RE WI SW++RPN GSI+ QRP ILVLDDFKCH+DE FI L KR +VI IPGGLT LLQPLDRMLNKQMKRL+RGKYTA +A+AVAD+ +GKL PP G+VSTWCKEAW +ITS ++TCFKICGLT ALDGSE HAWC HNFGE Y L ++Q W HP +LPPL+LP++P G +NPITAA+KEV+G+LLP +ES+S+VE+LE GGG +GE
Sbjct: 418 EKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAAL-KRGAKTVIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGKLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHHAWCEHNFGEDYGDLLEEQHAVWLAEHPDDTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVA-DESDSEVEVLEGXXXXXXXXXQGGGGAEGE 659 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig2025.5737.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig2025.5737.1 >prot_H-elongata_contig2025.5737.1 ID=prot_H-elongata_contig2025.5737.1|Name=mRNA_H-elongata_contig2025.5737.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=253bp MSFGVQDNSWCDAREWTLWISESWRIRPNIGSIITQRPSILVLDDFKCHRback to top mRNA from alignment at H-elongata_contig2025:12874..13632- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig2025.5737.1 ID=mRNA_H-elongata_contig2025.5737.1|Name=mRNA_H-elongata_contig2025.5737.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=759bp|location=Sequence derived from alignment at H-elongata_contig2025:12874..13632- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig2025:12874..13632- >mRNA_H-elongata_contig2025.5737.1 ID=mRNA_H-elongata_contig2025.5737.1|Name=mRNA_H-elongata_contig2025.5737.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1518bp|location=Sequence derived from alignment at H-elongata_contig2025:12874..13632- (Himanthalia elongata Himel1 dioecious)back to top |