prot_H-elongata_contig202226.5724.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig202226.5724.1
Unique Nameprot_H-elongata_contig202226.5724.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length125
Homology
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BLAST of mRNA_H-elongata_contig202226.5724.1 vs. uniprot
Match: D8LMA5_ECTSI (Conserved oligomeric Golgi complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA5_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 2.080e-27
Identity = 78/124 (62.90%), Postives = 82/124 (66.13%), Query Frame = 0 
Query:    1 QAAVEDEKNGSAGDSDATSLLRGMSPRASRVEAEITRRLRSEFASLVKPPQTITVTVAGGGEAVGGAGMGVSVGGRKADDLERVGGGWVRQRLERERKRQALLSCLRPFSALGSGIEAEKQFSR 124
            QAA EDE NG AGD+DATSLLRGMS RASRVEAEITRRLRSEFASL+KP      T A G  A  G   G              GG        RE +RQALLSCLRPFSALGSGIEAEKQF+R
Sbjct:  272 QAAAEDEANG-AGDADATSLLRGMSSRASRVEAEITRRLRSEFASLLKPRHPWPSTPAAGDGASAGNKAGXXXXXXXXXXXXGDGGA-------RESRRQALLSCLRPFSALGSGIEAEKQFAR 387
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BLAST of mRNA_H-elongata_contig202226.5724.1 vs. uniprot
Match: A0A6H5JYJ6_9PHAE (Conserved oligomeric Golgi complex subunit 2 (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ6_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 2.110e-26
Identity = 76/123 (61.79%), Postives = 80/123 (65.04%), Query Frame = 0 
Query:    2 AAVEDEKNGSAGDSDATSLLRGMSPRASRVEAEITRRLRSEFASLVKPPQTITVTVAGGGEAVGGAGMGVSVGGRKADDLERVGGGWVRQRLERERKRQALLSCLRPFSALGSGIEAEKQFSR 124
            AA EDE NG AGD+DATSLLRGMS RASRVEAEITRRLRSEFASL+KP      T A        AG G S G                    RE +RQALLSCLRPFSALGSGIEAEKQF+R
Sbjct:  280 AAAEDEANG-AGDADATSLLRGMSSRASRVEAEITRRLRSEFASLLKPRHPWPSTPA--------AGDGASAGNXXXXXXXXXXXXXXXXXGARESRRQALLSCLRPFSALGSGIEAEKQFAR 393
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig202226.5724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMA5_ECTSI2.080e-2762.90Conserved oligomeric Golgi complex subunit 2 n=1 T... [more]
A0A6H5JYJ6_9PHAE2.110e-2661.79Conserved oligomeric Golgi complex subunit 2 (Frag... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig202226contigH-elongata_contig202226:161..535 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig202226.5724.1mRNA_H-elongata_contig202226.5724.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig202226 161..535 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig202226.5724.1 ID=prot_H-elongata_contig202226.5724.1|Name=mRNA_H-elongata_contig202226.5724.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp
QAAVEDEKNGSAGDSDATSLLRGMSPRASRVEAEITRRLRSEFASLVKPP
QTITVTVAGGGEAVGGAGMGVSVGGRKADDLERVGGGWVRQRLERERKRQ
ALLSCLRPFSALGSGIEAEKQFSR*
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