mRNA_H-elongata_contig19874.5572.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig19874.5572.1
Unique NamemRNA_H-elongata_contig19874.5572.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig19874.5572.1 vs. uniprot
Match: D7G3L5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3L5_ECTSI)

HSP 1 Score: 760 bits (1962), Expect = 1.900e-254
Identity = 420/593 (70.83%), Postives = 462/593 (77.91%), Query Frame = 1
Query:    1 GKYIKLQYGPDWRLAGARTLPFLLEKSRLVHQELNERNYHVFYQMCKGVPEDLRESLAVGDAPEFDMLRKGGVYMQSDEVDDAEEFRGLTTALSTLGVTETEREGLWRLLSALLHLGNIQFVESDASTSGGGGEK---------GPGLLLESPLVEVEEIARMMGLPADRLRKSMRKKVAMTGRGSFLEIPLDPTQASDNRNGLVKHIYGQIFNWLVGKVNEAHGAGRTVEI---VAFVGILDIFGFEIMARNSFEQLCINFANEVLQQQFNSHVFVLEQAEYEQEGLDWTMIEFKDNQPVIDLVSKKPRGLLVQLEEQGLLGRRANNRALLQLYHNTHLGKSACYSKPRFDSTEFIILHFAGEVVYDMEGFLEKNNDSLHDNLLDLLAGTEDPFLKTVVEFVDPEARMEAAALESASFGNPLSPVVSPLRSPSPSVPYNSTGHISPASAAGPGSSSRPFVSGLSPKSSGHVGYSGATGGSPTTFGSNASMSSAKGLSPCTPPYRNGRPDSRKWR---SGGSGPSQMSNAVTVSKAFRGQLQSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRRE 1734
            GKYIKLQYG DW+L GARTLPFLLEKSRLVHQE NERNYHVFYQ+CKGVP++LR+SL+V +APEF+MLRKGGV+MQSDEVDDAEEF  L +ALSTLGVT  E+EGLWRLL+ALLHLGNI F E+D    G GG+          G GL LESPL+ +E++A M GLPADRL  SMRKKVAMTGRGSFLEIPL+PTQA DNRNGLVKH+YGQ+FNWLVGK+NEAH +G   ++   VAFVGILDIFGFEIM RNSFEQLCINFANEVLQQQFNSHVFVLEQ EYE+EGLDWTMIEF+DNQPVIDLVSKKPRGLL+QLEEQGLLGRRANN+ALLQLYHNTHL KSACYSKPRFDSTEFI+LHFAGEVVYD+EGFLEKNNDSLHDNLLDLL  T DPFL+ VVEFVDPEA     A    S  +P SPV +P   P+                          +   S +     G  G  G SP   G         G SP T     GR +SRK R   SGG+  SQMS+ VTVSKAFRGQLQ+LMATLRATEPHYIKCIKPNNVKAPGGFS+HLVHQQLNYSGVLEVVRIRRE
Sbjct:  433 GKYIKLQYGADWKLGGARTLPFLLEKSRLVHQEHNERNYHVFYQLCKGVPDELRQSLSVANAPEFEMLRKGGVFMQSDEVDDAEEFHCLASALSTLGVTSEEQEGLWRLLAALLHLGNIIFWETD----GDGGDXXXXXXXXXGGSGLRLESPLLALEDVASMAGLPADRLVSSMRKKVAMTGRGSFLEIPLNPTQARDNRNGLVKHVYGQVFNWLVGKINEAHRSGGGADMADTVAFVGILDIFGFEIMVRNSFEQLCINFANEVLQQQFNSHVFVLEQEEYEKEGLDWTMIEFQDNQPVIDLVSKKPRGLLIQLEEQGLLGRRANNKALLQLYHNTHLTKSACYSKPRFDSTEFIVLHFAGEVVYDIEGFLEKNNDSLHDNLLDLLDTTVDPFLRRVVEFVDPEAG--TTAYSPTSPMSPTSPVRTP---PAXXXXXXXXXXXXXXXXXXXXXXXXXXLKTFSFEDQRRGG--GDCGSSPGAVG---------GGSPATALRSVGRQESRKPRNAASGGARVSQMSSTVTVSKAFRGQLQNLMATLRATEPHYIKCIKPNNVKAPGGFSAHLVHQQLNYSGVLEVVRIRRE 1005          
BLAST of mRNA_H-elongata_contig19874.5572.1 vs. uniprot
Match: A0A836CBL8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL8_9STRA)

HSP 1 Score: 465 bits (1197), Expect = 7.040e-145
Identity = 294/643 (45.72%), Postives = 361/643 (56.14%), Query Frame = 1
Query:    1 GKYIKLQYGPDWRLAGARTLPFLLEKSRLVHQELNERNYHVFYQMCKGVPEDLR------ESLAVGDAP---------------------EFDMLRKGGVYMQSDEVDDAEEFRGLTTALSTLGVTETEREGLWRLLSALLHLGNIQFVESDASTSGG-----------GGEKGPGLLLESPLVEVEEIARMMGLPADRLRKSMRKKVAMTGRGSFLEIPLDPTQASDNRNGLVKHIYGQIFNW------------LVGKVNEAHGAG-----RTVEIVAFVGILDIFGFEIMARNSFEQLCINFANEV---------LQQQFNSHVFVLEQAEYEQEGLDWTMIEFKDNQPVIDLVSKKPRGLLVQLEEQGLLGRRANNRALLQLYHNTHLGKSACYSKPRFDSTEFIILHFAGEVVYDMEGFLEKNNDSLHDNLLDLLAGTEDPFLKTVVEFVDPEARMEAAALESASFGNPLSPVVSPLRSPSPSVPYNSTGHISPASA-AGPGSSSRPFVSGLSPKSSGHVGYSGATGGSPTTFGSNASMSSAKGLSPCTPPYRNGRPDSRKWRSGGSGPSQMSNAVTVSKAFRGQLQSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRRE 1734
            GKYIKLQYG DWR+ GARTL FLLEKSRLVHQ+  ERNYHVFYQ+C+   E          + A GDAP                     E  ML +G   MQ ++VDD  EF  L  AL TLGV   +R  +WRLL ALLH+GN+ F  +      G                  + L++ +  + E+A  +GL    L +++R +   T  GS++ IPLD TQA  N +GL+KH+YGQ F W            LV ++NE+H  G     R     AF+GILDIFGFEIM RNSFEQL INF             LQQQFN  VFVLEQ  Y++EGLDW  I F+DNQPVIDL+++KP GLL+QLEE G LGRRA+NRALLQLYHNTHLG +  YSKPRF+  EFI+ HFAG V Y++ GFLEKNNDSL D+LL+LL  + + FL T++      A  +  A   +S  +            SP     S G ++P S  A P                            P TFG +   +++             R + R+  SG      ++   TVS+ FRGQL SLM TLR TEPHYIKCIKPN VKAPGGFS HLV +QLNYSGVLEVVRIRRE
Sbjct:   95 GKYIKLQYGADWRIVGARTLHFLLEKSRLVHQDAAERNYHVFYQLCRAAAEGGGGVAVGGRAEAAGDAPRGGGGVYTQSEVCMEGQGCAAECAMLGQGTERMQFEDVDDLAEFAKLCEALETLGVGAADRGEMWRLLGALLHMGNVTFKTAPEGEPEGKPXXXXXXXXXXXXXXXXVELQAGIQPLSELAADLGLRLGELTENIRTRRTQTA-GSYISIPLDATQAKANLDGLIKHVYGQTFGWPVHAMSAGTFGWLVSRINESHQGGQPLASRKARSQAFIGILDIFGFEIMTRNSFEQLRINFTXXXXXXXXXXXXLQQQFNHQVFVLEQDTYQREGLDWKAISFRDNQPVIDLIARKPTGLLIQLEELGALGRRADNRALLQLYHNTHLGSNEHYSKPRFEGQEFIVKHFAGAVTYEVGGFLEKNNDSLQDSLLELLDTSTNAFLSTIMH----HAEDDVLATPDSSMSS------------SPFATNGSFGGLTPVSPPAAP----------------------------PRTFGGDHKRATS-------------REEHRRTASGRV--HLLATTSTVSRTFRGQLLSLMHTLRNTEPHYIKCIKPNTVKAPGGFSPHLVREQLNYSGVLEVVRIRRE 677          
BLAST of mRNA_H-elongata_contig19874.5572.1 vs. uniprot
Match: W7TRG2_9STRA (Myosin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRG2_9STRA)

HSP 1 Score: 470 bits (1209), Expect = 1.630e-144
Identity = 284/603 (47.10%), Postives = 355/603 (58.87%), Query Frame = 1
Query:    1 GKYIKLQYGPDWRLAGARTLPFLLEKSRLVHQELNERNYHVFYQMCKGVPEDLRESLAVGDAPE-FDMLRKGGVYMQSDEVDDAEEFRGLTTALSTLGVTETEREGLWRLLSALLHLGNIQFVESDASTSGGGGEKGPGLLLESPLVEVEEIARMMGLPADRLRKSMRKKVAMTGRGSFLEIPLDPTQASDNRNGLVKHIYGQIFNWLVGKVNEAHG-----------AGRTVEIVAFVGILDIFGFEIMARNSFEQLCINFANEVLQQQFNSHVFVLEQAEYEQEGLDWTMIEFKDNQPVIDLVSKKPRGLLVQLEEQGLLGRRANNRALLQLYHNTHLGKSACYSKPRFDSTEFIILHFAGEVVYDMEGFLEKNNDSLHDNLLDLLAGTEDPFLKTVVEFVD-------------PEARMEAAALESASFGNPLSPVVSPLRSPSPSVPYNSTGHISPASAAGPGSSSRPFVSGLSPKSSGHVGYSGATGGSPTTFGSNASMSSAKGLSPCTPPYRNGRPDSRKWRSGGSGPSQMSNAVTVSKAFRGQLQSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRRE 1734
            GKYIKLQY     L GA T  FLLEKSRLVH + +ERNYH+FY+M KG+      +L + D PE + +L +GG     D VDDAEEFR +  AL TLGV+E E   LWRLL+ LLHLGN++F        GG       + + SP V + EIA ++G+  D+L + + ++   T RGS L IPL+P Q+ +N   ++K++YG+ F+W++ K+N  H            A  +  + +F+GILDIFGFEIM RNSFEQLCIN+ANEVLQQQFN HVFVLEQ EY  E LDW++I F+DNQPVIDL++KKP GLL+ LEEQGLLGR+ANN ALL  YHNTHL K  CY+KPRF   EFII HFAG V Y    F+EKNNDSLHD+LLDL   +E+ F + +  F D             P+ +  A  +E    G P+    SP  + SPSVP                    P ++       G +   G T  +                                     +GP  +S A TVS  FR QL+ L ATL+ATEPHYIKCIKPN +KA GGFS  LV QQL YSGVLEVVRIRRE
Sbjct:  297 GKYIKLQYDAKRNLIGAWTDHFLLEKSRLVHVDPDERNYHIFYEMLKGLAPATLAALKLTDRPEDYTILAQGGCCSLED-VDDAEEFRQVAEALVTLGVSEEECASLWRLLAVLLHLGNLEF--------GGDNADDDLVQISSPHVSLSEIAELLGVTPDKLVQGVTRRTTHT-RGSSLTIPLNPEQSRNNVQAVIKYVYGEAFHWILRKINSCHSSMASDSSTRSPAASSEGVASFIGILDIFGFEIMTRNSFEQLCINYANEVLQQQFNMHVFVLEQQEYVAEELDWSVISFRDNQPVIDLIAKKPLGLLIMLEEQGLLGRKANNDALLTSYHNTHLNKVECYAKPRFQGDEFIIKHFAGSVTYSTASFIEKNNDSLHDDLLDLWRLSENAFFQNL--FTDKPVPGTPGYIAPLPQPKKAAVKVELDLDGRPIVST-SPSSTGSPSVP--------------------PTLASSDRNKRGRLLIGGKTNQA-------------------------------------AGPGAISGAFTVSCTFRRQLEELTATLKATEPHYIKCIKPNAIKAAGGFSPRLVVQQLRYSGVLEVVRIRRE 829          
BLAST of mRNA_H-elongata_contig19874.5572.1 vs. uniprot
Match: A0A835ZQ73_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ73_9STRA)

HSP 1 Score: 436 bits (1121), Expect = 5.700e-133
Identity = 272/613 (44.37%), Postives = 348/613 (56.77%), Query Frame = 1
Query:    1 GKYIKLQYGPDWRLAGARTLPFLLEKSRLVHQELNERNYHVFYQMCKG-VPEDLRESLAVGDAPEFDMLRKGGVYMQSDEVDDAEEFRGLTTALSTLGVTETEREGLWRLLSALLHLGNIQFVESDASTSGGGGEKGPGLLLESPLVEVEEIARMMGLPADRLRKSMRKKVAMTGRGSFLEIPLDPTQASDNRNGLVKHIYGQIFNWLVGKVNEAH-----------------------GAGRTVEIVA---FVGILDIFGFEIMARNSFEQLCINFANEVLQQQFNSHVFVLEQAEYEQEGLDWTMIEFKDNQPVIDLVSKKPRGLLVQLEEQGLLGRRAN------NRALLQLYHNTHLGKSAC--YSKPRFDSTEFIILHFAGEVVYDMEGFLEKNNDSLHDNLLDLLAGTEDPFLKTVVEFVDPEARMEAAALESASFGNPLSPVVSPLRSPSPSVPYNSTGHISPASAAGPGSSSRPFVSGLSPKSSGHVGYSGATGGSPTTFGSNASMSSAKGLSPCTPPYRNGRPDSRKWRSGGSGPSQMSNAVTVSKAFRGQLQSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRRE 1734
            GKYIKLQY   +RL GART  FLLEKSRLV  +  ER YH+FYQMC G +P+D+  +L + D  +F  +  GG     DEVDDA EFR    AL+TLG T  E   +WRLL+A+LH+GNI F +        GGE    ++    L+ +  +  ++GL    L K + ++  +T RGS  EIPL+ +QA DN +GLVKH+YG +F W+V K+N  H                          R V   A   F+GILDIFGFEIMA NSFEQLCINFANEVLQ+QFN HVFVLEQ EY  EGLD T I F+DNQ +IDL++KKP GL+  LE+QGL GR+A+      ++ LL LYH  H   +    Y KPRF++ +F++ HFAG VVYD+ GFLEKNNDSL  +L  LL+ + DP ++ +V   + +A  EAAAL +   G  L P            P  +T  ++    AG                                FG++A                              G  ++++A TVS+ FR QL+SL+  L ATEPHYIKCIKPNN+KAP G+SS LV QQL YSGVLEVVRIRRE
Sbjct:  295 GKYIKLQYDATFRLVGARTEHFLLEKSRLVRVDQAERGYHIFYQMCSGALPQDVTAALHLADPTKFRCIAMGGCTALGDEVDDASEFRASQGALATLGFTAAETAAVWRLLAAILHMGNIDFTDLQVGAGAVGGEDQTAMV-SGELISLGALEELLGLSGGALAKRVVRRAMVTARGSMHEIPLNSSQAKDNLDGLVKHVYGALFAWVVFKINRCHREQVIEGTKEAAEEDGDSKAXXXXXXRAVSASAARSFIGILDIFGFEIMATNSFEQLCINFANEVLQRQFNHHVFVLEQQEYTAEGLDVTSIPFRDNQGIIDLIAKKPLGLMPILEDQGLTGRKAHALNNLTDKKLLDLYHQAHHRNAPHPNYEKPRFENDQFVLRHFAGSVVYDIAGFLEKNNDSLQGDLRILLSESTDPLIRCLVSG-EGDAGFEAAAL-AVENGESLPP------------PPQAT--VAAHRRAG--------------------------------FGADA------------------------------GVDKLASASTVSQTFRKQLESLVEQLSATEPHYIKCIKPNNMKAPSGWSSQLVIQQLRYSGVLEVVRIRRE 828          
BLAST of mRNA_H-elongata_contig19874.5572.1 vs. uniprot
Match: D7G6I1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6I1_ECTSI)

HSP 1 Score: 379 bits (974), Expect = 1.720e-112
Identity = 248/609 (40.72%), Postives = 335/609 (55.01%), Query Frame = 1
Query:    1 GKYIKLQYGPDWRLAGARTLPFLLEKSRLVHQELNERNYHVFYQMCKGVPEDLRESLAV-GDAPEFDMLRKGGVYMQSDEVDDAEEFRGLTTALSTLGVTETEREGLWRLLSALLHLGNIQFVESDASTSGGGGEKGPGLLLESPLVEVEEIARMMGLPADRLRKSMRKKVAMTGRGSFLEIPLDPTQASDNRNGLVKHIYGQIFNWLVGKVNEAHGAGRTVEIVA-------FVGILDIFGFEIMARNSFEQLCINFANEVLQQQFNSHVFVLEQAEYEQEGLDWTMIEFKDNQPVIDLVSKKPRGLLVQLEEQGLLGRRA-------NNRALLQLYHNTHLGKSA--CYSKPRFDSTEFIILHFAGEVVYDMEGFLEKNNDSLHDNLLDLLAGTEDPFLKTVV---EFVDPEARMEAAALESASFGNPLSPVVSPLR---SPSPSVPYNSTGHISPASAAGPGSSSRPFVSGLSPKSSGHVGYSGATGGSPTTFGSNASMSSAKGLSPCTPPYRNGRPDSRKWRS----GGSGP----SQMSNAVTVSKAFRGQLQSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRRE 1734
            GKYIKLQY  D+RL GART  FLLEKSRLVH E +ER+YH+ YQ+ K +P   +E+  + G A  F +L +G   + SD+VDD EEF  +  ALS+L  T  ++  +WRLL+A+LH G + F +          + G         +    +A + G+  +   + + ++    G G+   + L+  QA +N   L+KH+Y Q+F W+  K+N    A +     A       F+GILDIFGFEIMA NSFEQLCINFANEVLQ+QFN H+FVLEQ EY +EGLD   I F+DNQ +IDL++K+P GL+  LE+Q L GR+A        ++ LL L+H  H  K+   CY KPRFD  EF+I+H+AG V Y   GFLEKNND+L ++L  LL  +  PFL+ ++     V  +A+  + A E  +  N      +P     S  P+   N+   +      G G  S PF +                    T     A  +S                           GG G     ++++   TVS AFR QL  L+A LR TEPHYIKCIKPN+ KAPGG++S LV +QL YSGVLEVVRIRRE
Sbjct:  405 GKYIKLQYDHDFRLVGARTEHFLLEKSRLVHLEESERSYHILYQVAKALPMADKEAFHLQGGAECFSLLTQGNRLVASDDVDDHEEFHAVDKALSSLDFTANDKTDMWRLLAAILHSGEVSFEDVSGKEQCRISKVG-----RCTSISPANLAALWGVDEEVFEEGVMRRTVTAG-GTSASVALNAAQAKENLLALLKHMYRQLFAWINWKINVVFDAPKKAVGEAGAGAKRTFIGILDIFGFEIMATNSFEQLCINFANEVLQRQFNHHIFVLEQEEYGEEGLDVGSIPFRDNQKIIDLIAKRPAGLMPILEDQALTGRKAASITSSFTDKNLLDLFHQQHHRKAPHPCYRKPRFDGPEFVIMHYAGNVTYTATGFLEKNNDTLQEDLRGLLLSSRIPFLRQLILGENGVFNKAQGTSTADEDHANDNDPITSNTPAHGGVSNGPNGKVNTGQRLHGRQTPGVGDRSVPFANS-------------------TAVSKRAMFASGXXXXXXXXXXXXXXXXXXXXXXXXXXGGMGKKAAFARIAAKSTVSNAFRSQLDDLVAQLRETEPHYIKCIKPNSDKAPGGWTSSLVIEQLRYSGVLEVVRIRRE 988          
BLAST of mRNA_H-elongata_contig19874.5572.1 vs. uniprot
Match: D7G6I0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6I0_ECTSI)

HSP 1 Score: 372 bits (955), Expect = 4.970e-110
Identity = 255/621 (41.06%), Postives = 329/621 (52.98%), Query Frame = 1
Query:    1 GKYIKLQYGPDWRLAGARTLPFLLEKSRLVHQELNERNYHVFYQMCKGVPEDLRESLAVGDAPEFDMLRKGGVYMQSDEVDDAE------EFRGLTTALSTLGVTETEREGLWRLLSALLHLGNIQFVESDASTSGGGGEKGPGLLLESPLVE-----------VEEIARMMGLPADRLRKSMRKKVAMTGRGSFLEIPLDPTQASDNRNGLVKHIYGQIFNWLVGKVNEAH-----------GAGRTVEI-------VAFVGILDIFGFEIMARNSFEQLCINFANEVLQQQFNSHVFVLEQAEYEQEGLDWTMIEFKDNQPVIDLVSKKPRGLLVQLEEQGLLGRRAN------NRALLQLYHNTHLGKSAC--YSKPRFDSTEFIILHFAGEVVYDMEGFLEKNNDSLHDNLLDLLAGTEDPFLKTVVEFVDPEARMEAAALESASFGNPLSPVVSPLRSPSPSVPYNSTGHISPASAAGPGSSSRPFVSGLSPKSSGHVGYSGATGGSPTTFGSNASMSSAKGLSPCTPPYRNGRPDSRKWRSGGSGPSQMSNAVTVSKAFRGQLQSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRRE 1734
            GKYIKL Y  D RL GA T  FLLEKSRLV  +  ER YH+FYQM  G+ E   E+L++  A EF M+ +G     SDEVDD +      EF     A+ TLG    ++  ++R+L+ALLHLGN++F E+++   GG   K      +S L             + + A ++GL  D L + +  +  M    S  EI L   ++SDN + L KH YG++F W+V  +N  H           GA     I        +F+GILDIFGFEIMA NSFEQLCINFANEVLQ+QFN H+FVLEQ EY+ EGLD   I FK+NQ +IDL+ KKP GL++ LE+Q L GR+A+      +R++L LYH  H  ++    Y KPR     F + HFAG V YD+ GFLEKNNDSL D+L  LL  +ED F++ + +                                 P+VP     H++P +               SP   G V + GA                    SP +PP R G    R    G  G S +S+     +    QL SL+  L  TEPHYIKCIKPN+ KAPGG+SS LV  QL YSGVLEVVRIRRE
Sbjct:  333 GKYIKLLYDRDSRLMGASTDHFLLEKSRLVKVDSGERGYHIFYQMLAGLDEAKAEALSLAPAEEFHMISQGDCVAISDEVDDRQARHVNTEFVQTEDAMETLGFEAEDKAAVFRVLAALLHLGNVRFEETESPAQGGA--KAKICRADSSLSSSNDSSSGEGAGLAKAAALLGLDEDILTRKVMWRAIMAPGKSLHEIALTARESSDNLSALSKHTYGKLFTWIVAFINRCHQQHVRGVTLDKGAAELAGIGDDEDKRSSFIGILDIFGFEIMATNSFEQLCINFANEVLQRQFNHHIFVLEQEEYKAEGLDVAAIPFKNNQDIIDLICKKPLGLMIILEDQVLTGRKAHAMNKLDDRSVLDLYHQEHHRRNPHPNYEKPRMQCDLFTLKHFAGNVTYDVAGFLEKNNDSLQDDLRALLLDSEDDFVRELADIT-------------------------------PTVPDGQQ-HLTPQN---------------SPARVG-VAFRGAD-------------------SPPSPPPRGGL-GGRYESEGQGGRSPVSDRRQSRRESERQLDSLVMQLGQTEPHYIKCIKPNSAKAPGGWSSPLVIDQLRYSGVLEVVRIRRE 883          
BLAST of mRNA_H-elongata_contig19874.5572.1 vs. uniprot
Match: A0A485LQX5_9STRA (Aste57867_22874 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQX5_9STRA)

HSP 1 Score: 368 bits (945), Expect = 6.360e-109
Identity = 221/580 (38.10%), Postives = 314/580 (54.14%), Query Frame = 1
Query:    1 GKYIKLQYGPDWRLAGARTLPFLLEKSRLVHQELNERNYHVFYQMCKGVPEDLRESLAVGDAPEFDMLRKGGVYMQSDEVDDAEEFRGLTTALSTLGVTETEREGLWRLLSALLHLGNIQFVESDASTSGGGGEKGPGLLLESPLVEVEEIARMMGLPADRLRKSMRKKVAMTGRGSFLEIPLDPTQASDNRNGLVKHIYGQIFNWLVGKVNEAH--GAGRTVEIVAFVGILDIFGFEIMARNSFEQLCINFANEVLQQQFNSHVFVLEQAEYEQEGLDWTMIEFKDNQPVIDLVSKKPRGLLVQLEEQGLLGRRANNRALLQLYHNTHLGKSACYSKPRFDSTEFIILHFAGEVVYDMEGFLEKNNDSLHDNLLDLLAGTEDPFLKTVVEFVDPEARMEAAALESASFGNPLSPVVSPLRSPSPSVPYNSTGHISPASAAGPGSSSRPFVSGLSPKSSGHVGYSGATGGSPTTFGSNASMSSAKGLSPCTPPYRNGRPDSRKWRSGGSGPSQMSNAVTVSKAFRGQLQSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRRE 1734
            GKYI++ Y  D R+ G     FLLEK+R+V  E  ERNYHVFYQM  G+    +  L +  A ++  L  G   ++ D VDDA +FR L +++  LG T   ++ ++++L+A+L LGN  FV S                  +P V V++IA ++G+    L + M  +  +TGRGS L + L   QA   ++   K+IYG++FN+L+G++N +         +  +++GILDIFGFEIM  NSFEQLCINF NE+LQQQFN HVFVLEQA Y  EG+  ++IEF+DNQ  +DL+ K+P GL+  L+EQ +L R+  +R LL +YH THL K A Y K RF+S +F++ H+AG+VVY + GF+ KNND+LH++L+DLL  +    +K++                              L  P+P                                                     AS+S +K  S  T P  N R  +          S +S + TV+  F+ QL  LM  L +T PHYIKCIKPNN+K  GGFSS LV  QL YSG+LEV++IR++
Sbjct:  280 GKYIQILYNADGRMCGVAMKHFLLEKTRIVVPETEERNYHVFYQMLAGLDATEKAELELSTATDYGYLTYGNC-IEIDGVDDAADFRVLRSSMDKLGFTTATQKDIFQILAAILKLGNATFVPSQNDKES---------CQFAPDVPVQKIAMLLGVNPVELEQKMTTQTTVTGRGSILHMKLTCDQADHAKHAFCKYIYGEVFNYLIGRMNSSSTDSVQAASKSKSYIGILDIFGFEIMPTNSFEQLCINFTNEMLQQQFNKHVFVLEQARYAAEGISVSVIEFQDNQECLDLIQKQPSGLMPLLDEQIMLKRKTTDRQLLTIYHQTHLDKHAHYGKSRFESDDFVVKHYAGDVVYHINGFIAKNNDNLHEDLMDLLRSSSLQLVKSI------------------------------LNGPAP-----------------------------------------------------ASLSRSKCDSAPTTPSNNHRRQA----------SSISGSTTVASKFKAQLAGLMEMLGSTTPHYIKCIKPNNIKFAGGFSSELVRDQLIYSGILEVIKIRQQ 756          
BLAST of mRNA_H-elongata_contig19874.5572.1 vs. uniprot
Match: A0A6G0XDA6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDA6_9STRA)

HSP 1 Score: 366 bits (939), Expect = 4.050e-108
Identity = 223/582 (38.32%), Postives = 320/582 (54.98%), Query Frame = 1
Query:    1 GKYIKLQYGPDWRLAGARTLPFLLEKSRLVHQELNERNYHVFYQMCKGVPEDLRESLAVGDAPEFDMLRKGGVYMQSDEVDDAEEFRGLTTALSTLGVTETEREGLWRLLSALLHLGNIQFV----ESDASTSGGGGEKGPGLLLESPLVEVEEIARMMGLPADRLRKSMRKKVAMTGRGSFLEIPLDPTQASDNRNGLVKHIYGQIFNWLVGKVNEAHGAGRTVEIVAFVGILDIFGFEIMARNSFEQLCINFANEVLQQQFNSHVFVLEQAEYEQEGLDWTMIEFKDNQPVIDLVSKKPRGLLVQLEEQGLLGRRANNRALLQLYHNTHLGKSACYSKPRFDSTEFIILHFAGEVVYDMEGFLEKNNDSLHDNLLDLLAGTEDPFLKTVVEFVDPEARMEAAALESASFGNPLSPVVSPLRSPSPSVPYNSTGHISPASAAGPGSSSRPFVSGLSPKSSGHVGYSGATGGSPTTFGSNASMSSAKGLSPCTPPYRNGRPDSRKWRSGGSGPSQMSNAVTVSKAFRGQLQSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRRE 1734
            GKYI+L Y  + R++G     FLLEK+R+V  E NERNYH+FYQ+  G+  D ++ L +G A ++D L  G   ++ D VDDA +F  + +A+  LG +   ++ ++++L+A+L LGN +FV    E++AS               SP V V+ IA ++G+    L + +  +  +TGRGS L + L   QA   +    K+IYG++FN+L+  +N +  +  +    +F+GILDIFGFEIM  NSFEQLCIN+ NE+LQQQFN HVFVLEQ  Y  EG+  ++IEF+DNQ  +DL+ K P G++  L+EQ +L R+ N+R LL +YH THL K   Y KPRF+S +F+I H+AG+V+Y + GF+ KNND+LH++L+ LL                   R  +  L S+    P S V S ++SP                                       G SG                      P TP  R+ R  S            +S + TV+  F+ QL  LM  L +T PHYIKCIKPNN+K  GGFS+ LV  QL YSG+LEV++IR++
Sbjct:  279 GKYIQLLYNQEGRISGVAIKHFLLEKTRIVLPETNERNYHIFYQILAGLSSDEKQELGLGIATDYDFLTYGKC-IEIDGVDDAADFHVMRSAMDKLGFSSLIQKDIFQVLAAILKLGNAKFVCQQNENEASQF-------------SPDVPVKNIAALLGVDPTELEEKITSQTTVTGRGSILHMKLTCEQADHAKQAFCKYIYGEVFNYLISHMNTSVESKHS----SFIGILDIFGFEIMPTNSFEQLCINYTNEMLQQQFNKHVFVLEQERYATEGISISVIEFQDNQKCLDLIQKPPSGIMPLLDEQIMLKRKINDRQLLTIYHQTHLDKHVNYGKPRFESDDFVIRHYAGDVIYSINGFISKNNDNLHEDLMMLL-------------------RSSSLKLISSIMSAPAS-VCSNIKSPR--------------------------------------GESG----------------------PSTPSSRHNRQAS-----------SISGSTTVASKFKAQLGGLMDMLNSTTPHYIKCIKPNNIKFAGGFSTELVRDQLIYSGILEVIKIRQQ 751          
BLAST of mRNA_H-elongata_contig19874.5572.1 vs. uniprot
Match: A0A2D4C1F9_PYTIN (Myosin-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1F9_PYTIN)

HSP 1 Score: 365 bits (937), Expect = 1.760e-107
Identity = 235/615 (38.21%), Postives = 316/615 (51.38%), Query Frame = 1
Query:    1 GKYIKLQYGPDWRL---------AGARTLPFLLEKSRLVHQELNERNYHVFYQMCKGVP--EDLRESLAVGDAPEFDMLRKGGVYMQSDEVDDAEEFRGLTTALSTLGVTE-TEREGLWRLLSALLHLGNIQFVESDASTSGGGGEKGPGLLLESPL---------VEVEEIARMMGLPADRLRKSMRKKVAMTGRGSFLEIPLDPTQASDNRNGLVKHIYGQIFNWLVGKVNEAHGAGRTVEIV----------------AFVGILDIFGFEIMARNSFEQLCINFANEVLQQQFNSHVFVLEQAEYEQEGLDWTMIEFKDNQPVIDLVSKKPRGLLVQLEEQGLLGRRANNRALLQLYHNTHLGKSACYSKPRFDSTEFIILHFAGEVVYDMEGFLEKNNDSLHDNLLDLLAGTEDPFLKTVVEFVDPEARMEAAALESASFGNPLSPVVSPLRSPSPSVPYNSTGHISPASAAGPGSSSRPFVSGLSPKSSGHVGYSGATGGSPTTFGSNASMSSAKGLSPCTPPYRNGRPDSRKWRSGGSGPSQMSNAVTVSKAFRGQLQSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRRE 1734
            GKYI+++Y  + R+          G     FLLEK+RLV  + +ERNYHVFYQ+  G+P  E+        DA  +D+L  GG  +  D VDDA EF  L   +  LG+   T +  L  LL+A+LHLGN+QF         G  ++       +P+          ++  +A ++G+ A      M  +  +TGRGS LE+ L P+QA +  +   K++YG++F+ LV ++N    A  T E                  +F+GILDIFGFE+MARNS EQLCINF NE LQQQFN HVFVLEQ  Y +EG+ +  +EF+DNQP +DL+ + P GLL  LEEQ LL R+  ++ LL +YH+ HL + A Y KPRFDS EF++ H+AG+V YD+  F+ KN D+LHD+LLDLL  +  P L+ +     PE                  P   P  +PSP+ P                                         G PT                               RSGG+    ++   TV+  FR QL  LM  L AT PHY+KCIKPNN+K PGGFSS LV  QL YSGVLEVVRIR++
Sbjct:  305 GKYIQIEYSSERRMIXXXXXXXXVGVGIRHFLLEKTRLVRPQQHERNYHVFYQLLAGLPTLENASRLALSSDATRYDVLTHGGC-VDIDGVDDALEFAQLRRCMDELGLDRATFQLPLMELLAAILHLGNVQFELRARDLPDGSNQRNSEEETTTPVFPAAADDGGADLALVASLLGVDAREFATKMVTQTTITGRGSVLEMQLSPSQAKNALDAFCKYLYGELFHHLVTRINGFARAQTTTEKTTNARSSTKALSSSSSSSFIGILDIFGFEVMARNSLEQLCINFTNETLQQQFNRHVFVLEQERYAREGIAFASVEFQDNQPCLDLIQRPPTGLLPLLEEQMLLKRKTTDKQLLTIYHSHHLDRHAHYRKPRFDSDEFVVRHYAGDVTYDVTDFIAKNTDNLHDDLLDLLRRSSHPLLRAIFAAPPPE------------------PASKPRGAPSPAAP-----------------------------------------GKPTAT-----------------------------RSGGAA---LTGTTTVTSRFRLQLAELMDVLWATAPHYVKCIKPNNLKFPGGFSSDLVRHQLVYSGVLEVVRIRQD 827          
BLAST of mRNA_H-elongata_contig19874.5572.1 vs. uniprot
Match: A0A024UE78_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UE78_9STRA)

HSP 1 Score: 361 bits (927), Expect = 1.810e-106
Identity = 224/582 (38.49%), Postives = 314/582 (53.95%), Query Frame = 1
Query:    1 GKYIKLQYGPDWRLAGARTLPFLLEKSRLVHQELNERNYHVFYQMCKGVPEDLRESLAVGDAPEFDMLRKGGVYMQSDEVDDAEEFRGLTTALSTLGVTETEREGLWRLLSALLHLGNIQFV----ESDASTSGGGGEKGPGLLLESPLVEVEEIARMMGLPADRLRKSMRKKVAMTGRGSFLEIPLDPTQASDNRNGLVKHIYGQIFNWLVGKVNEAHGAGRTVEIVAFVGILDIFGFEIMARNSFEQLCINFANEVLQQQFNSHVFVLEQAEYEQEGLDWTMIEFKDNQPVIDLVSKKPRGLLVQLEEQGLLGRRANNRALLQLYHNTHLGKSACYSKPRFDSTEFIILHFAGEVVYDMEGFLEKNNDSLHDNLLDLLAGTEDPFLKTVVEFVDPEARMEAAALESASFGNPLSPVVSPLRSPSPSVPYNSTGHISPASAAGPGSSSRPFVSGLSPKSSGHVGYSGATGGSPTTFGSNASMSSAKGLSPCTPPYRNGRPDSRKWRSGGSGPSQMSNAVTVSKAFRGQLQSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRRE 1734
            GKYI++ Y  + R+ G     FLLEK+R+V  E NERNYHVFYQM  G+    +  L +  A  ++ L  G   ++ D VDDA +FR L  +++ LG T   +  ++++L+A+L LGN  F     + DA                +P V VE IA ++G+ A  L + M  +  +TGRGS L + L   QA   ++   K+IYG++FN+L+G++N      +     +F+GILDIFGFE+M  NSFEQLCINFANEVLQQQFN H+FVLEQ  Y  EG+  ++IEF+DNQ  +DL+ K P G++  L+EQ +L R+  +R LL +YH THL K   Y+KPRF+S +F+I H+AG+VVY + GF+ KNND+LH++L++LL  +        +E V       AA L   +      PV   L+SP                                                          ++    SP T   RN               S +S + TV+  F+ QL  LM  L +T PHYIKCIKPNN+K PGGFSS LV  QL  SG+LEV++IR++
Sbjct:  289 GKYIQILYDREGRMCGVAIKHFLLEKTRIVLPETNERNYHVFYQMLAGMEPREQTDLELTTAEHYEYLTTGNC-IEIDGVDDAADFRVLRASMTKLGFTPATQTEIFQVLAAILKLGNASFTCQQNDRDACQF-------------APDVPVETIASLLGVKATELEEKMTTQTTVTGRGSILHMKLTCEQAQHAKHAFCKYIYGEVFNYLIGRMNSTASEAKAQ---SFIGILDIFGFEVMPANSFEQLCINFANEVLQQQFNKHIFVLEQERYAAEGISVSVIEFQDNQECLDLIQKPPSGIMPLLDEQIMLKRKTTDRQLLSIYHQTHLEKHPHYAKPRFESDDFVIKHYAGDVVYCINGFIGKNNDNLHEDLMELLRASS-------LELV-------AAMLSGHT------PVGVTLKSP---------------------------------------------------------RATDLPTSPTTKHRRNA--------------SSLSGSTTVASKFKAQLGGLMDMLSSTTPHYIKCIKPNNIKFPGGFSSELVRDQLICSGILEVIKIRQQ 762          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19874.5572.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3L5_ECTSI1.900e-25470.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CBL8_9STRA7.040e-14545.72P-loop containing nucleoside triphosphate hydrolas... [more]
W7TRG2_9STRA1.630e-14447.10Myosin-like protein n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A835ZQ73_9STRA5.700e-13344.37P-loop containing nucleoside triphosphate hydrolas... [more]
D7G6I1_ECTSI1.720e-11240.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G6I0_ECTSI4.970e-11041.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A485LQX5_9STRA6.360e-10938.10Aste57867_22874 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0XDA6_9STRA4.050e-10838.32Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A2D4C1F9_PYTIN1.760e-10738.21Myosin-like protein n=1 Tax=Pythium insidiosum Tax... [more]
A0A024UE78_9STRA1.810e-10638.49Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19874contigH-elongata_contig19874:330..6502 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score768.8
Seed ortholog evalue1.8e-219
Seed eggNOG ortholog2880.D7G3L5
KEGG koko:K10352,ko:K10357
KEGG Pathwayko04530,map04530
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5022@1,KOG0160@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03029,ko04131,ko04147,ko04812
Hectar predicted targeting categoryother localisation
Exons12
Model size1752
Cds size1752
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19874.5572.1prot_H-elongata_contig19874.5572.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig19874 330..6502 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930121.7433634-CDS-H-elongata_contig19874:329..4141622930121.7433634-CDS-H-elongata_contig19874:329..414Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 330..414 -
1691679289.1024327-CDS-H-elongata_contig19874:329..4141691679289.1024327-CDS-H-elongata_contig19874:329..414Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 330..414 -
1622930121.7593987-CDS-H-elongata_contig19874:650..8261622930121.7593987-CDS-H-elongata_contig19874:650..826Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 651..826 -
1691679289.1124523-CDS-H-elongata_contig19874:650..8261691679289.1124523-CDS-H-elongata_contig19874:650..826Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 651..826 -
1622930121.774126-CDS-H-elongata_contig19874:1092..13941622930121.774126-CDS-H-elongata_contig19874:1092..1394Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 1093..1394 -
1691679289.1234245-CDS-H-elongata_contig19874:1092..13941691679289.1234245-CDS-H-elongata_contig19874:1092..1394Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 1093..1394 -
1622930121.7917886-CDS-H-elongata_contig19874:1843..19761622930121.7917886-CDS-H-elongata_contig19874:1843..1976Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 1844..1976 -
1691679289.1318476-CDS-H-elongata_contig19874:1843..19761691679289.1318476-CDS-H-elongata_contig19874:1843..1976Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 1844..1976 -
1622930121.810359-CDS-H-elongata_contig19874:2100..21931622930121.810359-CDS-H-elongata_contig19874:2100..2193Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 2101..2193 -
1691679289.140128-CDS-H-elongata_contig19874:2100..21931691679289.140128-CDS-H-elongata_contig19874:2100..2193Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 2101..2193 -
1622930121.8254533-CDS-H-elongata_contig19874:2914..30531622930121.8254533-CDS-H-elongata_contig19874:2914..3053Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 2915..3053 -
1691679289.1524525-CDS-H-elongata_contig19874:2914..30531691679289.1524525-CDS-H-elongata_contig19874:2914..3053Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 2915..3053 -
1622930121.8440022-CDS-H-elongata_contig19874:3366..34901622930121.8440022-CDS-H-elongata_contig19874:3366..3490Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 3367..3490 -
1691679289.1730964-CDS-H-elongata_contig19874:3366..34901691679289.1730964-CDS-H-elongata_contig19874:3366..3490Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 3367..3490 -
1622930121.8617084-CDS-H-elongata_contig19874:3897..39911622930121.8617084-CDS-H-elongata_contig19874:3897..3991Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 3898..3991 -
1691679289.1854048-CDS-H-elongata_contig19874:3897..39911691679289.1854048-CDS-H-elongata_contig19874:3897..3991Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 3898..3991 -
1622930121.8754656-CDS-H-elongata_contig19874:4333..44321622930121.8754656-CDS-H-elongata_contig19874:4333..4432Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 4334..4432 -
1691679289.2048728-CDS-H-elongata_contig19874:4333..44321691679289.2048728-CDS-H-elongata_contig19874:4333..4432Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 4334..4432 -
1622930121.8986197-CDS-H-elongata_contig19874:4744..50141622930121.8986197-CDS-H-elongata_contig19874:4744..5014Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 4745..5014 -
1691679289.2168195-CDS-H-elongata_contig19874:4744..50141691679289.2168195-CDS-H-elongata_contig19874:4744..5014Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 4745..5014 -
1622930121.914484-CDS-H-elongata_contig19874:5663..57561622930121.914484-CDS-H-elongata_contig19874:5663..5756Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 5664..5756 -
1691679289.2241805-CDS-H-elongata_contig19874:5663..57561691679289.2241805-CDS-H-elongata_contig19874:5663..5756Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 5664..5756 -
1622930121.9256654-CDS-H-elongata_contig19874:6358..65021622930121.9256654-CDS-H-elongata_contig19874:6358..6502Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 6359..6502 -
1691679289.2317407-CDS-H-elongata_contig19874:6358..65021691679289.2317407-CDS-H-elongata_contig19874:6358..6502Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig19874 6359..6502 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig19874.5572.1

>prot_H-elongata_contig19874.5572.1 ID=prot_H-elongata_contig19874.5572.1|Name=mRNA_H-elongata_contig19874.5572.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=584bp
GKYIKLQYGPDWRLAGARTLPFLLEKSRLVHQELNERNYHVFYQMCKGVP
EDLRESLAVGDAPEFDMLRKGGVYMQSDEVDDAEEFRGLTTALSTLGVTE
TEREGLWRLLSALLHLGNIQFVESDASTSGGGGEKGPGLLLESPLVEVEE
IARMMGLPADRLRKSMRKKVAMTGRGSFLEIPLDPTQASDNRNGLVKHIY
GQIFNWLVGKVNEAHGAGRTVEIVAFVGILDIFGFEIMARNSFEQLCINF
ANEVLQQQFNSHVFVLEQAEYEQEGLDWTMIEFKDNQPVIDLVSKKPRGL
LVQLEEQGLLGRRANNRALLQLYHNTHLGKSACYSKPRFDSTEFIILHFA
GEVVYDMEGFLEKNNDSLHDNLLDLLAGTEDPFLKTVVEFVDPEARMEAA
ALESASFGNPLSPVVSPLRSPSPSVPYNSTGHISPASAAGPGSSSRPFVS
GLSPKSSGHVGYSGATGGSPTTFGSNASMSSAKGLSPCTPPYRNGRPDSR
KWRSGGSGPSQMSNAVTVSKAFRGQLQSLMATLRATEPHYIKCIKPNNVK
APGGFSSHLVHQQLNYSGVLEVVRIRREVRIEG*
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mRNA from alignment at H-elongata_contig19874:330..6502-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig19874.5572.1 ID=mRNA_H-elongata_contig19874.5572.1|Name=mRNA_H-elongata_contig19874.5572.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6173bp|location=Sequence derived from alignment at H-elongata_contig19874:330..6502- (Himanthalia elongata Himel1 dioecious)
GGAAAGTACATAAAACTCCAGTACGGTCCGGATTGGAGGCTGGCTGGAGC TCGCACACTGCCGTTTTTGCTAGAGAAGAGCCGCCTTGTACACCAGGAGC TGAACGAGCGAAACTACCACGTTTTCTACCAGATGTGCAAGGGGGTGGGT AGATAAGAAAGCGTCACCCTCCTAACACCGAAATAAAGGGTACTGTACCT TTAAAGAGAAGATATTCCATAATGAAGCGTTCGTTTCCTTTACTGGGTAT TATAAGAAAAGTAAAGCTTATTATTATTATTATTATTATTTTTCATATAA AGTTAACGACATTGGTGCCGAAAATTGTGGTGTGAAAATTTCATTTTTGT TTTGTGTTGTTTTGTTTTTTTACGGTCTTCCTATATTTCTATATAACTTT TTTTCTCTGGTGTAGCGTACCATTGACCACGAAGAGTTTGTGTTCGGCCA ACGTGTACAGTTCTCTACGTCGTGTACGATACAATGCCCTCTAGCGAAAG CCCGCTCGTCATTCATTTTAGTCGCAAGGTAACGTTGTAAAAACCCGCTT TAGGGTCTCTTCCTTCAGAAGTCGTGTCGTGTGTCTCTTGCGCCTTTACC CCTATGAAACTCGATATCTTCATTTTTTTAAAATACTAAATTCATTACAA AAATTGAAATCCGGTTCCAAAAGAGTGAAATGTGCTTTTTGTTTTTGTTT GGTCTCGGCTTTCACTGTTCACCGTCTTAAATCTTCGTTGGTGAAGGTCC CCGAAGATCTTCGCGAGAGCCTTGCCGTCGGCGACGCACCGGAGTTCGAT ATGCTAAGAAAGGGGGGTGTTTATATGCAGAGCGACGAGGTATGCGCTGA ACCCCGGACTGGAAAGTACTGATCATTTATTTATTTTACATTTGATATAT CTAAATGGAAATGCTTACATTCTTTTAGTGATTTTTCTTTCCGTGTTGCT TGATATGCGAAAGGTAGTAATGTACAAATTCAAATCTAGAATGCAACTCT CACGGCGCTAAAAATTGTGGATGTTCATACGGTTGGAATAAGTTAATATT TTAAAGATAAAAATGTCTAGGTATTTTTAGCGGATAATATTGCAAAATAA TTTGTCATGTTTGCCAAAAACTCCCCAAGTTATTCTTAATGTGCGCTCGA ATACTCCCGTCTCTCACGCGTTTTATTTTATTCTTAGTATCCGCGGTATG AATTGCTATTAATTTTTATTTATTAAAGACTTTGAGCTCATTCCAACCCT CCGAATATCTATTCCTATTTTTTAGGAGGGGTGAAAGGCGACAATAAAAA AATAAAAGTTATACTAATATAATATTGAAAGTTTGCTACGTTACTTGTTT TATTTAATACTACTAAATACTTTTATATGTTTATATTTAAGCCTCGCATT ATTTATACGAATAGTAGTAATTTATTACGAAGCTAAAGTCTTTAAATAAA AATAAATTATTTGCCTTGTATCTAACATATATATTAAGGTGGACGACGCG GAGGAGTTCCGTGGCCTTACAACCGCTCTCTCTACGCTGGGAGTCACCGA AACGGAGCGGGAGGGCCTGTGGCGTCTCCTTTCGGCCCTGCTGCACCTGG GAAACATCCAATTTGTCGAAAGCGACGCGTCGACGAGTGGCGGAGGAGGC GAAAAAGGGCCGGGGTTGCTTCTTGAGAGTCCCCTAGTGGAGGTGGAGGA GATAGCGAGAATGATGGGTCTGCCGGCTGATCGTCTGAGAAAATCAATGC GTAAAAAGGTATGAATATGGTTCAATAGTTTTTGACCCGGAGGTTTGTAA AAATAATCCAATATTAAATGCGTTACGATTCCGCGTCCATGTTATTAGGA TGTGAATGAAAAACAAAAAGAAGAGATAAAATGTTTTGTGCTTTCCCCAT CAAACTCGATCTGCGGAAGGTTGGAATGAGTTCAAAGTTTTTTTAAATAC AGTTCCGAAAGGGTAAGTATTGGTAGTAATGCTGATGTGGCTGTAGCAGC TGAGCAATTGAATGCTTCTCGCGCTACCAGAATTTCTTTTTCAAACGAGG TCGATGTATTGTTTTCGAAGGTGGCAATGACGGGCAGGGGATCGTTCTTG GAGATTCCCTTGGACCCTACCCAAGCCAGCGACAACCGAAACGGGCTTGT AAAGCATATTTACGGACAGGTATCGTGATGGATGCCGTTTTTTTTTTAGC GATAAGGGAGTTCCACTTGCATTATAAGGGCTGATTTTTTTTTAGCGATA AGGGCTGGGTAAGAAAGGGGCTGATATAAAAACCTCGAAATTGGAATTTT TGTAAAACGTTTACTATTGTGATATTTTGCTATGAAGATCCAGAGTAGGT TATTGGAGTTCAAATATTTTTTATTGGAGTTCAAAAGTGGATACCGAGGC AGTCAGTCCACCATATATCTTAATTTTAGTATATATTCGTTTTTACCTCA GTTAAAAGTAAGTACCTATCTCCATTCATCATCCCTTTTTGCAAAACGCC TACATGTACAGATCTTTAACTGGCTAGTGGGCAAGGTAAACGAGGCCCAC GGAGCAGGACGCACCGTTGAGATCGTGGCCTTCGTCGGCATCTTGGACAT CTTTGGTAATTCAACTTTGAGATGTTTGTTGCTGTTGCTGATGCCGTTGC CGTTGATTTATATTCATACAGTAGTAGTATTGCAGGCAAAAAATGATCTA AACTGTTAATAGTGGAAGTCGCCGTTTCTGTAGAAAGGCTCCAAAGCTGG AGCGATATTGTTGTTATTTGTTTTTGTTTTTTTTATAATTAATATTATTG TTATTTTATTTATTTATTCTTATTATGAATAATATTATTTAGTACTGTTG CTGTTTATTATTATTATTATTTTTTCATTAAAAACATTTATTTTATTTCA TTTATTTGTTTTTATTTAAAAAAAAAGTCCAGGTAGAAAATAAATTCTAT TTTCTCATGTTAACATCAAGACTTTGTTTTCACCATGTTACCTTGTGGTT GTTGACTCCCAGGCTTTGAGATCATGGCCCGCAATAGCTTCGAGCAGCTG TGCATTAACTTTGCGAACGAGGTTCTGCAGCAGCAGTTCAATAGCCACGT GTTCGTCCTCGAGCAGGCGGAGTACGAGCAGGAAGGGTAAGTCGAGCACC TCTCACGGTGCTAAAAAGGAAAAAATGCCGACGAATTTACGGATATTATA GCGAGAAATTTGTCAGAGTAGTCAGTATCACCTGCTGTACCGCGACGACG AGTCATAGGAGTTATAGTCTAGTCTTCCGTGTAAAAATAGCTCTCTATTC TTTACTTTATTTTTAGAAATAACATCTTAAATACGTAGACTATCCATCTA CTACATGAACCTCCCCAACACAATCTCTTCGCAAATACGCAAATCAAACC TTTTGATTCGATAAATAACAACACGTTGGGTGTTGTTATTTTTTGGCAGG CTGGACTGGACAATGATCGAGTTTAAAGACAACCAGCCGGTGATCGATCT GGTCTCGAAGAAGCCCCGAGGACTTCTTGTCCAGCTGGAGGAGCAGGGTC TCTTGGGTCGCAGAGCCAACAACAGGGCATTGCTACAGGTGTAAGATTTG TGCTAGATGTTTTTTACTCCCATCCCGAACTCCTTCAGTATTTTGGTGAT ATTTACACTTCAGTATGGATGTATATATGTCTCGTAGCACACTTAGCAGC AGGATCAACTGGATTTAGTTTCCTTCTTCTCGTGGCCAGCTATATATTTT TTGCATGCCGAGTTGTAACCGTAGGTAGGTTTTTTGAGGTGGGGGGGTCG AGACTGTGTTTTGTGAAAGCCGTTAAACCGCTATAGAGTGAAAATGAAAG GGCGAAAGAAAAACTTCCCATGCTGCTGTTGCTGCTGCCTTGCGATTGTG TGGCACTGTTATTATTAATATTTAATAGTTTAATATTATATAGTGGGTAT CGAGAGTTCCGTTTTGAAGAGTGCTGGGAGATGTTATTTAATGAACACAG CCCCGTGGCGTTGGAAACCACAGTTATTTTAAATGTCTTTCTTTTTGTTC AAAACATTTGAGTGAAATATCTTGCGCAATAGCTGTGTGTTGTGCCTATA GCTATTAATAGTGTGCCTATAGTCTATGCCTGTGAATAGTGTGCCTATAG TATATAGTCTATAGTCTATAGCTATTAATAGTGAGTACTGTAAAGTATGT TTTAGTATCGGCCTAAATATATACATTCTGTAAAAAACGCTCCTTTGTAT GTAGCAACCAGCTTTACGCTTTTTATTTTGTTTTGTTTTTGGTGTTGTGT TTACTGCAGCTGTACCACAACACGCACCTAGGGAAAAGCGCGTGCTACTC CAAGCCTCGCTTCGACTCTACAGAGTTCATCATCCTGCACTTCGCCGGAG AGGTGAGGTTTTCGACCGAAATCCGTTTTTTTCCGAAATCTGTGACATAC CGGGGCAAAATCATATACTCGAGAGGCGTGGATCATCTTATTAACTGTAC CCATATGTATGTGTATACTTTATCAGGTGGTTTATGACATGGAGGGTTTC CTGGAGAAGAACAACGATTCTCTGCACGACAACCTGCTAGACCTGCTGGC AGGCACCGAGGATCCTTTCCTAAAGACCGTCGTAGAGTTCGTTGATCCGG AAGCAAGAAGTGAGAGGCTCTTTAACCCCCCCCCCCACAGCCTTCCCCCC GCGTGGGTTGTATATGGTGTTGTTCTAGATGGCAGTAATATACCACGCCT TATAATGTTTTACATTATTCCCTGCTCGAAAACCTGCTTTCCATTCTCGG GACAAGTTTTGCCGTGGGATATCTATATCTATATCTATCTTTTTTAACGT TTTGACAAAATTATTAAATCAGTTCATAGAACAAAACAAACGCAAACAAA TTATATATTGGGGCTGGCTTATACTATGAATTAAACATGCTAGTCATACT ATACTTTGTCGAGGCTAGCTTATAAGCAGGGTTAGTTTTCTTCTTTTTTA TTTGACGCTACAAGTATTGTTTTTTTATAGTAATCCACTGACCCTCGTTC CTCTCCCACCCCTTGACTCTGCTGCTCTTTACGTATTTTTTGTTGGCTTC CTTTGTAGTGGAGGCCGCCGCCCTCGAGAGCGCCTCGTTCGGGAACCCTC TGTCCCCCGTCGTTTCGCCGCTGAGGTCGCCAAGCCCGTCCGTTCCGTAC AACAGTACCGGTCACATATCTCCCGCGTCCGCAGCCGGCCCGGGTTCGTC CTCGAGACCTTTCGTATCGGGTTTATCTCCGAAAAGTAGTGGCCATGTCG GGTACAGCGGGGCCACTGGAGGCAGTCCCACAACGTTCGGCTCTAACGCT TCGATGTCCTCCGCCAAGGGTTTAAGCCCGTGCACACCGCCCTACAGGAA TGGAAGACCGGTGGGTTTTATATGTTTCGTAATGGCGTTTTTGTTCTGGC GACATAGAGGGGAAATTATCTAACTTGGTTAATTTAAGTTCATGGGGCCT TTTTAAAGATTTACACACGTTTTTTGTGAGAGCATGGGAGTGTTTTGCGG AAATAGTAAATTATGGAAGTCCCAACCAACCACAAAGTGTCAGACCGCTA GAAAATATGTGTTTTGCACCGTTTTTTTGACCTGACCATCCCCTCCCTCT GTTGAAACCCCCTCTGCCTAAAACAGGATAGTCGTAAGTGGCGGAGCGGT GGGTCAGGGCCGTCTCAGATGTCGAACGCGGTAACTGTTTCTAAGGCGTT CCGAGGCCAGCTTCAAAGCCTCATGGCTACTTTGCGTGCCACAGAGCCGC ACTATATTAAGTGTATTAAGCCTAACAACGTCAAGGCGCCCGGCGGCTTC AGGTATATATTTACTTATACATGTACTGAAATATAATTTTGAATCGATCA ACGTTTGCGTAGGAGGGGTGCTAACACGATGTCACCACCGCTCTCTTAAC CTTAGTACCTCACTTTTGATAGATAGAAAACGTCAAACCATTAGAGATGC GATTATTATTATTATTTTTTAAATATGTAGGCGTTGTTTTATAAACATCT TAGCGGCCACAGCTTCTCCACCCGTTTGTGCGACGCAGCTCTCATCTCGT CCACCAGCAGCTCAACTATTCTGGTGTTCTGGAAGTTGTCCGCATTCGGC GCGAGGTAAGGATTGAGGGTTGA
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Coding sequence (CDS) from alignment at H-elongata_contig19874:330..6502-

>mRNA_H-elongata_contig19874.5572.1 ID=mRNA_H-elongata_contig19874.5572.1|Name=mRNA_H-elongata_contig19874.5572.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3504bp|location=Sequence derived from alignment at H-elongata_contig19874:330..6502- (Himanthalia elongata Himel1 dioecious)
GGAAAGTACATAAAACTCCAGTACGGTCCGGATTGGAGGCTGGCTGGAGC
TCGCACACTGCCGTTTTTGCTAGAGAAGAGCCGCCTTGTACACCAGGAGC
TGAACGAGCGAAACTACCACGTTTTCTACCAGATGTGCAAGGGGGGAAAG
TACATAAAACTCCAGTACGGTCCGGATTGGAGGCTGGCTGGAGCTCGCAC
ACTGCCGTTTTTGCTAGAGAAGAGCCGCCTTGTACACCAGGAGCTGAACG
AGCGAAACTACCACGTTTTCTACCAGATGTGCAAGGGGGTCCCCGAAGAT
CTTCGCGAGAGCCTTGCCGTCGGCGACGCACCGGAGTTCGATATGCTAAG
AAAGGGGGGTGTTTATATGCAGAGCGACGAGGTCCCCGAAGATCTTCGCG
AGAGCCTTGCCGTCGGCGACGCACCGGAGTTCGATATGCTAAGAAAGGGG
GGTGTTTATATGCAGAGCGACGAGGTGGACGACGCGGAGGAGTTCCGTGG
CCTTACAACCGCTCTCTCTACGCTGGGAGTCACCGAAACGGAGCGGGAGG
GCCTGTGGCGTCTCCTTTCGGCCCTGCTGCACCTGGGAAACATCCAATTT
GTCGAAAGCGACGCGTCGACGAGTGGCGGAGGAGGCGAAAAAGGGCCGGG
GTTGCTTCTTGAGAGTCCCCTAGTGGAGGTGGAGGAGATAGCGAGAATGA
TGGGTCTGCCGGCTGATCGTCTGAGAAAATCAATGCGTAAAAAGGTGGAC
GACGCGGAGGAGTTCCGTGGCCTTACAACCGCTCTCTCTACGCTGGGAGT
CACCGAAACGGAGCGGGAGGGCCTGTGGCGTCTCCTTTCGGCCCTGCTGC
ACCTGGGAAACATCCAATTTGTCGAAAGCGACGCGTCGACGAGTGGCGGA
GGAGGCGAAAAAGGGCCGGGGTTGCTTCTTGAGAGTCCCCTAGTGGAGGT
GGAGGAGATAGCGAGAATGATGGGTCTGCCGGCTGATCGTCTGAGAAAAT
CAATGCGTAAAAAGGTGGCAATGACGGGCAGGGGATCGTTCTTGGAGATT
CCCTTGGACCCTACCCAAGCCAGCGACAACCGAAACGGGCTTGTAAAGCA
TATTTACGGACAGGTGGCAATGACGGGCAGGGGATCGTTCTTGGAGATTC
CCTTGGACCCTACCCAAGCCAGCGACAACCGAAACGGGCTTGTAAAGCAT
ATTTACGGACAGATCTTTAACTGGCTAGTGGGCAAGGTAAACGAGGCCCA
CGGAGCAGGACGCACCGTTGAGATCGTGGCCTTCGTCGGCATCTTGGACA
TCTTTGATCTTTAACTGGCTAGTGGGCAAGGTAAACGAGGCCCACGGAGC
AGGACGCACCGTTGAGATCGTGGCCTTCGTCGGCATCTTGGACATCTTTG
GCTTTGAGATCATGGCCCGCAATAGCTTCGAGCAGCTGTGCATTAACTTT
GCGAACGAGGTTCTGCAGCAGCAGTTCAATAGCCACGTGTTCGTCCTCGA
GCAGGCGGAGTACGAGCAGGAAGGGCTTTGAGATCATGGCCCGCAATAGC
TTCGAGCAGCTGTGCATTAACTTTGCGAACGAGGTTCTGCAGCAGCAGTT
CAATAGCCACGTGTTCGTCCTCGAGCAGGCGGAGTACGAGCAGGAAGGGC
TGGACTGGACAATGATCGAGTTTAAAGACAACCAGCCGGTGATCGATCTG
GTCTCGAAGAAGCCCCGAGGACTTCTTGTCCAGCTGGAGGAGCAGGGTCT
CTTGGGTCGCAGAGCCAACAACAGGGCATTGCTACAGGCTGGACTGGACA
ATGATCGAGTTTAAAGACAACCAGCCGGTGATCGATCTGGTCTCGAAGAA
GCCCCGAGGACTTCTTGTCCAGCTGGAGGAGCAGGGTCTCTTGGGTCGCA
GAGCCAACAACAGGGCATTGCTACAGCTGTACCACAACACGCACCTAGGG
AAAAGCGCGTGCTACTCCAAGCCTCGCTTCGACTCTACAGAGTTCATCAT
CCTGCACTTCGCCGGAGAGCTGTACCACAACACGCACCTAGGGAAAAGCG
CGTGCTACTCCAAGCCTCGCTTCGACTCTACAGAGTTCATCATCCTGCAC
TTCGCCGGAGAGGTGGTTTATGACATGGAGGGTTTCCTGGAGAAGAACAA
CGATTCTCTGCACGACAACCTGCTAGACCTGCTGGCAGGCACCGAGGATC
CTTTCCTAAAGACCGTCGTAGAGTTCGTTGATCCGGAAGCAAGAAGTGGT
TTATGACATGGAGGGTTTCCTGGAGAAGAACAACGATTCTCTGCACGACA
ACCTGCTAGACCTGCTGGCAGGCACCGAGGATCCTTTCCTAAAGACCGTC
GTAGAGTTCGTTGATCCGGAAGCAAGAATGGAGGCCGCCGCCCTCGAGAG
CGCCTCGTTCGGGAACCCTCTGTCCCCCGTCGTTTCGCCGCTGAGGTCGC
CAAGCCCGTCCGTTCCGTACAACAGTACCGGTCACATATCTCCCGCGTCC
GCAGCCGGCCCGGGTTCGTCCTCGAGACCTTTCGTATCGGGTTTATCTCC
GAAAAGTAGTGGCCATGTCGGGTACAGCGGGGCCACTGGAGGCAGTCCCA
CAACGTTCGGCTCTAACGCTTCGATGTCCTCCGCCAAGGGTTTAAGCCCG
TGCACACCGCCCTACAGGAATGGAAGACCGTGGAGGCCGCCGCCCTCGAG
AGCGCCTCGTTCGGGAACCCTCTGTCCCCCGTCGTTTCGCCGCTGAGGTC
GCCAAGCCCGTCCGTTCCGTACAACAGTACCGGTCACATATCTCCCGCGT
CCGCAGCCGGCCCGGGTTCGTCCTCGAGACCTTTCGTATCGGGTTTATCT
CCGAAAAGTAGTGGCCATGTCGGGTACAGCGGGGCCACTGGAGGCAGTCC
CACAACGTTCGGCTCTAACGCTTCGATGTCCTCCGCCAAGGGTTTAAGCC
CGTGCACACCGCCCTACAGGAATGGAAGACCGGATAGTCGTAAGTGGCGG
AGCGGTGGGTCAGGGCCGTCTCAGATGTCGAACGCGGTAACTGTTTCTAA
GGCGTTCCGAGGCCAGCTTCAAAGCCTCATGGCTACTTTGCGTGCCACAG
AGCCGCACTATATTAAGTGTATTAAGCCTAACAACGTCAAGGCGCCCGGC
GGCTTCAGGATAGTCGTAAGTGGCGGAGCGGTGGGTCAGGGCCGTCTCAG
ATGTCGAACGCGGTAACTGTTTCTAAGGCGTTCCGAGGCCAGCTTCAAAG
CCTCATGGCTACTTTGCGTGCCACAGAGCCGCACTATATTAAGTGTATTA
AGCCTAACAACGTCAAGGCGCCCGGCGGCTTCAGCTCTCATCTCGTCCAC
CAGCAGCTCAACTATTCTGGTGTTCTGGAAGTTGTCCGCATTCGGCGCGA
GGTAAGGATTGAGGGTTGACTCTCATCTCGTCCACCAGCAGCTCAACTAT
TCTGGTGTTCTGGAAGTTGTCCGCATTCGGCGCGAGGTAAGGATTGAGGG
TTGA
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