mRNA_H-elongata_contig19864.5568.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig19864.5568.1 vs. uniprot
Match: A0A6H5L2N4_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2N4_9PHAE) HSP 1 Score: 390 bits (1002), Expect = 7.580e-134 Identity = 191/298 (64.09%), Postives = 227/298 (76.17%), Query Frame = 1
Query: 4 FHEDIPLDELAEVAPLTQGGFCVICSCLYRGQRAVLKITRPRGPA----GATQDLLAEIELYKRISWRGGHANMARAFGSGFHTQQGDKAP--FLVLERLDGGTLEKTFEQSLPLNDVWSSPIGRLPVALELADAMVFLHHEAVPGCAIIHRDLKPSNIGLCGKGHVKVFDLGLSVLREVRANSSETYQTSGMAGTKRFMAPEVYSGLPYNEKADVYSFGVVLWQMCTLRKPFAGMSEAAHFEQVVLGGLRPPLDPLWSPGLSALLQNCWHPDPKFRPPMMAVRQMLREVFVAGGGGY 879
F+E++ L EL EV P +QGGFCVICSC+YRGQ+AVLKI +P + GA QDLL EI +Y++IS RGGH N+ARAFG+G H QQG+ +P FL+LERL GGTLE FE+S VWS PIGRLPVA+ELA+A+ FLH A+PG ++HRDLKPSNIGLCG GH+KVFDLGLSV+R+V + Y+ SGMAG+KRFMAPEV +GL YNEK DVYSF +VLWQ+C LRKPFAGMSEA H+ QVV GGLRPPLD W P L LLQ CWH P RP M+ R LR++F GGGGY
Sbjct: 7 FNENVTLAELNEVEPFSQGGFCVICSCIYRGQQAVLKIPKPATTSSRSGGAAQDLLREISIYRQISLRGGHPNIARAFGAGTHVQQGETSPSPFLLLERLQGGTLENAFERSTA---VWSDPIGRLPVAIELAEAVAFLHEAAIPGGVVLHRDLKPSNIGLCGAGHIKVFDLGLSVVRQVLEAPTRVYEMSGMAGSKRFMAPEVCTGLSYNEKVDVYSFALVLWQICALRKPFAGMSEADHYLQVVQGGLRPPLDARWPPQLVHLLQACWHVHPDARPTMVQARDTLRQIFAMGGGGY 301
BLAST of mRNA_H-elongata_contig19864.5568.1 vs. uniprot
Match: A0A6H5JMU8_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMU8_9PHAE) HSP 1 Score: 358 bits (918), Expect = 1.610e-120 Identity = 178/299 (59.53%), Postives = 221/299 (73.91%), Query Frame = 1
Query: 1 MFHEDIPLDELAEVAPLTQGGFCVICSCLYRG-QRAVLKITRPRGPAGATQDLLAEIELYKRISWRGGHANMARAFGSGFHTQQGDKAPFLVLERLDGGTLEKTFEQSLPLND------VWSSPIGRLPVALELADAMVFLHHEAVPGCAIIHRDLKPSNIGLCGKGHVKVFDLGLSVLREVR-ANSSETYQTSGMAGTKRFMAPEVYSGLPYNEKADVYSFGVVLWQMCTLRKPFAGMSEAAHFEQVVLGGLRPPLDPLWSPGLSALLQNCWHPDPKFRPPMMAVRQMLREVFVAGGG 873
+F +++ LD L ++ PL GGFC++CSC Y G QRAVLKI +P+GP A DLLAEI +YKRIS RGGH N+A A G+GF T +G+ PFLVLERL+GG+L E S L W + RLPVALELADA+ +LH +A+PG I+HRDLKP+NIGLC +GHVKVFD GLSV++EVR N ++ YQ SGMAG+KRFM+PEV GLPYNEK DVYSF +VLW++CTLRKPFAGMS A H+ +V+ GGLRPPLDP W L LLQ CWH DP RP + R +L+++F+AGGG
Sbjct: 46 VFQDNLSLDALTDIQPLDHGGFCIVCSCTYNGVQRAVLKIPKPQGPNSAAADLLAEIAIYKRISARGGHPNIAAALGAGF-TSRGE--PFLVLERLEGGSLAGAIESSRTLGGDAADGGAWVDLVTRLPVALELADALQYLHRDALPGF-ILHRDLKPTNIGLCAEGHVKVFDFGLSVVQEVRRGNLNQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWEICTLRKPFAGMSVADHYREVITGGLRPPLDPRWPGALQHLLQACWHEDPDRRPSISEARDVLQQIFLAGGG 340
BLAST of mRNA_H-elongata_contig19864.5568.1 vs. uniprot
Match: A0A6H5K4Q0_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4Q0_9PHAE) HSP 1 Score: 216 bits (549), Expect = 4.700e-64 Identity = 115/300 (38.33%), Postives = 173/300 (57.67%), Query Frame = 1
Query: 13 DIPLD------ELAEVAPLTQGGFCVICSCLYRGQRAVLKITRPR--GPAGATQDLLAEIELYKRISWRGGHANMARAFGSGFHTQQGDKAPFLVLERLDGGTLEKT----FEQSLPLNDVWSSPIG-------RLPVALELADAMVFLHHEAVPGCAIIHRDLKPSNIGLCGKGHVKVFDLGLSVLREVRANSSETYQTSGMAGTKRFMAPEVYSGLPYNEKADVYSFGVVLWQMCTLRKPFAGMSEAAHFEQVVLGGLRPPLDPLWSPGLSALLQNCWHPDPKFRPPMMAVRQMLREV 855
D+P++ +L + + GG+C + +C+ G++ +KI P GA DL EI + KR+ H ++ +G+G +G+ PFLVLERL L + + + + + + RL L+L D + +LH E++PG +IHRDLKPSNIG+ G +KVFD GL+ LRE R ++ Y +G G++RFMAPEV+ G+PYNEKAD+YS+G+VLW++C L+KPFAGMS H +V G+RPPLD W L +LL++CWH + + RP + L +
Sbjct: 69 DLPINWNLRFKDLVILEHIANGGYCTVLACMLHGEKRAVKIPLATCSDPEGAVADLTNEIRILKRLR----HPHLCSVYGAGGWRAEGE-LPFLVLERLQYKNLAQQCGTDVDDTSMIVEFKQKKLRAKFRFRKRLGYGLQLGDLLRYLHSESIPGGFVIHRDLKPSNIGISDDGVLKVFDFGLAKLREQRDPLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKADIYSYGIVLWELCALQKPFAGMSSHEHARKVFRHGVRPPLDKRWPDELKSLLRSCWHAEAEERPDAAQAVETLARI 363
BLAST of mRNA_H-elongata_contig19864.5568.1 vs. uniprot
Match: A0A835Z8J1_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J1_9STRA) HSP 1 Score: 186 bits (473), Expect = 1.870e-51 Identity = 109/296 (36.82%), Postives = 157/296 (53.04%), Query Frame = 1
Query: 13 DIPLDELAEVAPLTQGGFCVICSCLYRGQRAVLKITRPRGPAGAT--QDLLAEIELYKRISWRGGHANMARAFGSGFHTQQGDKAPFLVLERLDGGTLE-------------KTFEQSLPLNDVWSSPIGRLPVALELADAMVFLHHEAVPGCAIIHRDLKPSNIGLCGKGHVKVFDLGLSVLREVRANSSETYQTSGMAGTKRFMAPEVYSGLPYNEKADVYSFGVVLWQMCTLRKPFAGMSEAAHFEQVVLGGLRPPLDPLWSPGLSALLQNCWHPDPKFRPPMMAVRQMLREV 855
++ EL+EV L G C I + Y Q V+K+ R A ++L E+EL R++ + N+ R G+G ++ FL++ERLDGGTL + F++ P N + GR ++AD + +LH EA+PG ++HRD+KP NIG G K+ DLGL+ +T+ +G G+ R+MAPEV PYNEK DV+S+G+VLW+M TLRKP+ GM+ + VV G +RPPL+ W S LL CW D K RP V L+E+
Sbjct: 233 EVQWSELSEVEFLVNGSRCTIYTATYNHQACVVKLLRKDAVDAAIVRRELELEMELLMRLN----NENIVRLLGAGIEPER-----FLIIERLDGGTLSQRCGSGGAVRDRRRRFKRKQPFNYLELLKCGR-----QIADGLRYLHDEAIPGRIVLHRDIKPDNIGFTKDGDAKLLDLGLAKAVPRSELQDQTFAMTGETGSTRYMAPEVAESRPYNEKVDVHSYGMVLWEMATLRKPYDGMARDQFYSAVVRGHVRPPLNKRWPKEFSDLLAACWAEDFKARPSFADVCNRLQEM 514
BLAST of mRNA_H-elongata_contig19864.5568.1 vs. uniprot
Match: A0A835ZE86_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE86_9STRA) HSP 1 Score: 187 bits (476), Expect = 2.670e-51 Identity = 109/296 (36.82%), Postives = 157/296 (53.04%), Query Frame = 1
Query: 25 DELAEVAPLTQGGFCVICSCLYRGQRAVLKITRP--RGPAGATQDLLAEIELYKRISWRGGHANMARAFGSGFHTQQGDKAPFLVLERLDGGTLEKTFEQSLP-------LNDVWSSP--------IGRLPVALELADAMVFLHHEAVPGCA-IIHRDLKPSNIGLCGKGHVKVFDLGLSVLREVRANSSETYQTSGMAGTKRFMAPEVYSGLPYNEKADVYSFGVVLWQMCTLRKPFAGMSEAAHFEQVVLGGLRPPLDPLWSPGLSALLQNCWHPDPKFRPPMMAVRQMLREVF 858
++L + +T+G C I S YRG + V+K+ R P A DL E+E + W H ++ + G+G ++ FLVLE L+ GTL P N + + L A+ELA+A+ +LHH G A ++HRDLKP NIG G +K+FD GL+ + RA + Y +G G+ R+MAPEV LPYNEK DVY+FG++LW+M R+ F GMS +++VV GG+RPPLD W P L L+ CWH D RP + L++++
Sbjct: 138 EDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELE----VLWGLDHRHIIKLLGAGL--REIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDIY 427
BLAST of mRNA_H-elongata_contig19864.5568.1 vs. uniprot
Match: A0A836C8Q0_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Q0_9STRA) HSP 1 Score: 186 bits (472), Expect = 3.010e-51 Identity = 106/278 (38.13%), Postives = 151/278 (54.32%), Query Frame = 1
Query: 13 DIPLDELAEVAPLTQGGFCVICSCLYRGQRAVLKITRPRGPAGATQDLLAEIELYKRISWRGGHANMARAFGSGFHTQQGDKAPFLVLERLDGGTLEKTFEQSLPLNDV-----WSSPIGRLPV---ALELADAMVFLHHEAVPGCAIIHRDLKPSNIGLCGKGHVKVFDLGLS-VLREVRANSSETYQTSGMAGTKRFMAPEVYSGLPYNEKADVYSFGVVLWQMCTLRKPFAGMSEAAHFEQVVLGGLRPPLDPLWSPGLSALLQNCWHPDPKFRP 819
D+ D L + L G C I + Y+ +K+ R P T + E+ + I R H N+ + G+G ++ F+V+ERLDGGTL + +L + D +P L + A +LA A+ ++H EAVPGC +IHRDLKP NI G G++K+ D+GL+ V+ + + Y+ +G G+ R+MAPEV PYN KADVY FG++LW+M +RKPF G+ FE VV G +PP+D W P ALL CW DP RP
Sbjct: 191 DMRWDSLQDAEFLVNGSRCTIYTAFYKNLPVAVKLVRKDIPDKKT--VYGELNMETDILMRLHHPNIVKLIGAGTQPER-----FMVIERLDGGTLAQRCGSALNIRDRRRRFRTKTPFTYLELVTCARQLAHALRYMHTEAVPGCMVIHRDLKPDNIAFDGMGNLKILDMGLAKVVPLADGDPTAVYKMTGETGSLRYMAPEVALRKPYNGKADVYGFGMILWEMAAMRKPFEGIGRELFFELVVNGTSKPPVDRNWPPEFGALLHKCWEKDPAKRP 461
BLAST of mRNA_H-elongata_contig19864.5568.1 vs. uniprot
Match: A0A7S2LC32_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LC32_9STRA) HSP 1 Score: 181 bits (458), Expect = 4.630e-51 Identity = 107/295 (36.27%), Postives = 164/295 (55.59%), Query Frame = 1
Query: 25 DELAEVAPLTQGGFCVICSCLYRGQRAVLKITRP--RGPAGATQDLLAEIELYKRISWRGGHANMARAFGSGFHTQQGDKAPFLVLERLDGGTLEKTFEQSLPLND--------VWSSPIGRLPVALELADAMVFLHHEAVPGCAIIHRDLKPSNIGLCGKGHVKVFDLGLS-VLREVRANSSETYQTSGMAGTKRFMAPEVYSGLPYNEKADVYSFGVVLWQMCTLRKPFAGMSEAAHFEQVVLGGLRPPLDPLWSPGLSALLQNCWHPDPKFRPPMMAVRQMLREVFVAGGGG 876
+ L + LT GG I + + G+ V+K +P + A A ++ AE++++ R+S H N+ G+G T +G + F+VLERLDGGTL + + D S + L A LADA+ + H +AVPG ++HRD+KP NIG G +K+ D GL+ V+ + ++ Y SG G+ R+MAPEV PYN KADVYSFG++LW+M +KP+ G++ + + ++V GG RPP++ W L +L+ +CW D + RP AV + L + A GG
Sbjct: 49 NSLQNIEYLTDGGNSWIHTAVVNGKSVVVKTLKPECQDMAMAINEIEAELDVHARLS----HENIVALVGAGL-TSKGVR--FVVLERLDGGTLTQVLGYDTRIRDRRRRFFKRKQLSYLEVLNHARSLADALGYCHGKAVPGTLVLHRDVKPDNIGFTIDGTLKLIDFGLAKVVDNATPDCNDVYSLSGETGSLRYMAPEVADNRPYNHKADVYSFGIILWEMLAYKKPYDGLNRESFYVRIVDGGERPPVNKKWPKELVSLVTDCWSADIEQRPSFSAVVERLTNMISAEKGG 336
BLAST of mRNA_H-elongata_contig19864.5568.1 vs. uniprot
Match: A0A7S2S189_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S189_9STRA) HSP 1 Score: 184 bits (467), Expect = 1.020e-49 Identity = 104/292 (35.62%), Postives = 162/292 (55.48%), Query Frame = 1
Query: 13 DIPLDELAEVAPLTQGGFCVICSCLYRGQRAVLKITRP--RGPAGATQDLLAEIELYKRISWRGGHANMARAFGSGFHTQQGDKAPFLVLERLDGGTLEKTFEQSLPLND----VWSSP----IGRLPVALELADAMVFLHHEAVPGCAIIHRDLKPSNIGLCGKGHVKVFDLGLS-VLREVRANSSETYQTSGMAGTKRFMAPEVYSGLPYNEKADVYSFGVVLWQMCTLRKPFAGMSEAAHFEQVVLGGLRPPLDPLWSPGLSALLQNCWHPDPKFRPPMMAVRQMLREV 855
D+ L+ V LT GG I + + V+K +P + A A ++ AE++++ ++ H+++ G+G T +G + F+VLERLDGG+L + + D W + L A +A+AM +LH +A+PGC ++HRDLKP NIG G +K+ D GL+ V+ ++ E Y+ SG G+ R+MAPEV G PYN KADVYSFG++LW+M +KPF GM + FE+V GG RP ++ W + ++++CW D + RP V L ++
Sbjct: 373 DLRWSNLSNVEYLTDGGNSWIHTAVLNRHPVVVKWLKPECQDLAVAINEIEAELDIHAQLQ----HSHIVSLCGAGL-TSKGSR--FMVLERLDGGSLTQVLGYDTRIRDRRRRFWKKKHFTYVEVLKCARSIAEAMEYLHSDAIPGCMVLHRDLKPDNIGFTLDGTIKLIDFGLARVVENSSPDTDELYEMSGETGSLRYMAPEVADGQPYNHKADVYSFGIILWEMLAHKKPFDGMDKEQFFERVTYGGERPTINKKWPTEFTDIMKSCWSYDSESRPNFQTVVAKLNKI 657
BLAST of mRNA_H-elongata_contig19864.5568.1 vs. uniprot
Match: A0A7R9WTW5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WTW5_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.180e-47 Identity = 103/275 (37.45%), Postives = 149/275 (54.18%), Query Frame = 1
Query: 28 ELAEVAPLTQGGFCVICSCLYRGQRAVLKITRP--RGPAGATQDLLAEIELYKRISWRGGHANMARAFGSGFHTQQGDKAPFLVLERLDGGTLEKTFEQSLPLND----VWSSP----IGRLPVALELADAMVFLHHEAVPGCAIIHRDLKPSNIGLCGKGHVKVFDLGLS-VLREVRANSSETYQTSGMAGTKRFMAPEVYSGLPYNEKADVYSFGVVLWQMCTLRKPFAGMSEAAHFEQVVLGGLRPPLDPLWSPGLSALLQNCWHPDPKFRP 819
+L V LT GG + + ++ G+ V+K +P + A ++ +E+ ++ R++ H N+ G+G T +G + F+VLERLDGG+L + + D W + L A +A AM + H +AVPG ++HRDLKP NIG G +KVFD GL+ +L A + E Y SG G+ R+MAPEV PYN KADVYSFGV+LW+M +KPFA ++ V+ GG R + W LS L+ CWH +P RP
Sbjct: 202 QLRHVEYLTDGGNSWVHTAIFNGKPVVVKTLKPECQDVVVAINEIESEVAIHARLN----HLNVVELIGAGT-TSKGVR--FVVLERLDGGSLTQLLGYDTRIRDRRRRFWKKKSIAYVDVLRYARSIASAMRYCHEDAVPGSTVLHRDLKPDNIGFALDGTLKVFDFGLARLLENSNAKTDEKYSMSGETGSLRYMAPEVARSFPYNYKADVYSFGVILWEMNAGKKPFADYDRDTFYDSVIHGGERMKCNKKWPEELSDLITACWHENPDLRP 469
BLAST of mRNA_H-elongata_contig19864.5568.1 vs. uniprot
Match: A0A7S3V705_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V705_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.360e-47 Identity = 103/287 (35.89%), Postives = 161/287 (56.10%), Query Frame = 1
Query: 28 ELAEVAPLTQGGFCVICSCLYRGQRAVLKITRP--RGPAGATQDLLAEIELYKRISWRGGHANMARAFGSGFHTQQGDKAPFLVLERLDGGTLEKTFEQSLPLND----VWS----SPIGRLPVALELADAMVFLHHEAVPGCAIIHRDLKPSNIGLCGKGHVKVFDLGLS-VLREVRANSSETYQTSGMAGTKRFMAPEVYSGLPYNEKADVYSFGVVLWQMCTLRKPFAGMSEAAHFEQVVLGGLRPPLDPLWSPGLSALLQNCWHPDPKFRPPMMAVRQMLREV 855
+L + LT GG I + + V+K +P + A A ++ E+ +++ ++ H N+ FG+GF + +K+ F+V+ERLDGGTL + + D W S I L A ++A+A+ + H AV G ++HRDLKP NIGL G VK+ D GL+ V+ NS+E ++ SG G+ R+MAPEV SG PYN K D+YSFG++LW++ +KPF GM+ +E+VV GG RP + + L+ ++Q CW + + RP + + L E+
Sbjct: 396 DLRNIEYLTDGGNNWIHTAVMNKTPIVIKQLKPEVQDVAIAMNEIEGELAIHRLLN----HKNIVSLFGAGFTS---NKSRFIVMERLDGGTLTQVLGYDTRIRDRRRRFWKKNKLSYIKVLDCAKQIAEAIDYCHRSAVEGSMVLHRDLKPDNIGLTLSGIVKIIDFGLARVVDNTSPNSNEVFEMSGETGSLRYMAPEVASGKPYNHKVDIYSFGMILWELVAYQKPFDGMNRDQFYERVVHGGFRPEITKKFPEDLADVIQRCWSTEAEKRPNFDQIIEELEEI 675 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19864.5568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19864.5568.1 >prot_H-elongata_contig19864.5568.1 ID=prot_H-elongata_contig19864.5568.1|Name=mRNA_H-elongata_contig19864.5568.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=297bp MFHEDIPLDELAEVAPLTQGGFCVICSCLYRGQRAVLKITRPRGPAGATQback to top mRNA from alignment at H-elongata_contig19864:4587..6642- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19864.5568.1 ID=mRNA_H-elongata_contig19864.5568.1|Name=mRNA_H-elongata_contig19864.5568.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2056bp|location=Sequence derived from alignment at H-elongata_contig19864:4587..6642- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19864:4587..6642- >mRNA_H-elongata_contig19864.5568.1 ID=mRNA_H-elongata_contig19864.5568.1|Name=mRNA_H-elongata_contig19864.5568.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1782bp|location=Sequence derived from alignment at H-elongata_contig19864:4587..6642- (Himanthalia elongata Himel1 dioecious)back to top |