prot_H-elongata_contig198294.5553.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig198294.5553.1
Unique Nameprot_H-elongata_contig198294.5553.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
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BLAST of mRNA_H-elongata_contig198294.5553.1 vs. uniprot
Match: D7FHI0_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI0_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 2.210e-33
Identity = 66/92 (71.74%), Postives = 77/92 (83.70%), Query Frame = 0 
Query:    1 LAPLFGGDGLAVVDLLLVQPELEMRLHAVELVSALLFHKKVGMAFVRRGWMKELLRLGAMEDA-AFIEPEVAFCLQNFATSGGVMEAVCRVQ 91
            L PLF GDGLAVVD+LL  P+LE+R HAVEL+S LL HKKVG+AFVRRGW++ LLRLGA+ED  AF+EPEV +CL   A+SGGVMEAVCR Q
Sbjct:  417 LTPLFSGDGLAVVDVLLANPQLEIRGHAVELLSTLLVHKKVGLAFVRRGWVRTLLRLGALEDGTAFLEPEVGYCLHVLASSGGVMEAVCRAQ 508
[Close]
BLAST of mRNA_H-elongata_contig198294.5553.1 vs. uniprot
Match: A0A6H5JDL7_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL7_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 2.220e-33
Identity = 66/92 (71.74%), Postives = 77/92 (83.70%), Query Frame = 0 
Query:    1 LAPLFGGDGLAVVDLLLVQPELEMRLHAVELVSALLFHKKVGMAFVRRGWMKELLRLGAMEDA-AFIEPEVAFCLQNFATSGGVMEAVCRVQ 91
            L PLF GDGLAVVDLLL  P+LE+R HAVEL+S LL HKKVG+AFVRRGW++ LLRLGA++D  AF+EPEV +CL   A+SGGVMEAVCR Q
Sbjct:  497 LTPLFSGDGLAVVDLLLANPQLEIRGHAVELLSTLLVHKKVGLAFVRRGWVRTLLRLGALDDGNAFLEPEVGYCLHVLASSGGVMEAVCRAQ 588
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig198294.5553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHI0_ECTSI2.210e-3371.74LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JDL7_9PHAE2.220e-3371.74LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig198294contigH-elongata_contig198294:2..828 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig198294.5553.1mRNA_H-elongata_contig198294.5553.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig198294 2..829 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig198294.5553.1 ID=prot_H-elongata_contig198294.5553.1|Name=mRNA_H-elongata_contig198294.5553.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
LAPLFGGDGLAVVDLLLVQPELEMRLHAVELVSALLFHKKVGMAFVRRGW
MKELLRLGAMEDAAFIEPEVAFCLQNFATSGGVMEAVCRVQ
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