mRNA_H-elongata_contig198224.5547.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig198224.5547.1 vs. uniprot
Match: UPI0018F37BD3 (sulfotransferase family protein n=1 Tax=Pseudosporangium sp. NEAU-24 TaxID=2785915 RepID=UPI0018F37BD3) HSP 1 Score: 79.7 bits (195), Expect = 1.290e-16 Identity = 36/53 (67.92%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 37 HNARVKAVVPADRLLEFSVKSGWEPLCTFLGVPVPDVPFPRSNSRDTITNRIA 195
HNA V+ VPA RLLEF VK GWEPLC FLGVPVPD PFPR+N NR+A
Sbjct: 152 HNAAVRREVPAPRLLEFQVKQGWEPLCAFLGVPVPDEPFPRTNDSTEFRNRVA 204
BLAST of mRNA_H-elongata_contig198224.5547.1 vs. uniprot
Match: UPI00109BF298 (uncharacterized protein LOC110252707 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BF298) HSP 1 Score: 79.3 bits (194), Expect = 2.820e-16 Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 1
Query: 31 IRHNARVKAVVPADRLLEFSVKSGWEPLCTFLGVPVPDVPFPRSNSRD 174
++HNARVKA +P D+LL ++VK GW+PLC FLGVPVPDVPFPR N +D
Sbjct: 152 LQHNARVKATIPRDKLLVYNVKQGWQPLCEFLGVPVPDVPFPRLNVKD 199
BLAST of mRNA_H-elongata_contig198224.5547.1 vs. uniprot
Match: A0A8J3S6S3_PLARO (Sulfotransferase family protein n=2 Tax=Planobispora rosea TaxID=35762 RepID=A0A8J3S6S3_PLARO) HSP 1 Score: 78.6 bits (192), Expect = 5.540e-16 Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 34 RHNARVKAVVPADRLLEFSVKSGWEPLCTFLGVPVPDVPFPRSNSRDTITNRIARCV 204
RHNA V+A +PADRLL + V GWEPLC FLGVPVPD PFPR+N ++ AR +
Sbjct: 160 RHNAEVRAAIPADRLLVYRVGEGWEPLCAFLGVPVPDEPFPRANDSESFWTNFARTL 216
BLAST of mRNA_H-elongata_contig198224.5547.1 vs. uniprot
Match: A0A183ANB6_9TREM (Uncharacterized protein n=1 Tax=Echinostoma caproni TaxID=27848 RepID=A0A183ANB6_9TREM) HSP 1 Score: 79.0 bits (193), Expect = 5.930e-16 Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 13 EAKADLIRHNARVKAVVPADRLLEFSVKSGWEPLCTFLGVPVPDVPFPRSNSRDTITNRIAR 198
+ K +R N V+ VP+DRLL F VK GWEPLC FLG P+PDVPFP N R+T+ RI R
Sbjct: 177 QVKRAFVRRNEEVERTVPSDRLLVFQVKDGWEPLCRFLGKPIPDVPFPHVNDRETMKGRIRR 238
BLAST of mRNA_H-elongata_contig198224.5547.1 vs. uniprot
Match: UPI000A2A9B8C (uncharacterized protein LOC110242367 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9B8C) HSP 1 Score: 78.2 bits (191), Expect = 7.770e-16 Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 1
Query: 31 IRHNARVKAVVPADRLLEFSVKSGWEPLCTFLGVPVPDVPFPRSNSRDTI 180
I HNARV + +P D+LL ++VK GWEPLC FLGVPVPDVPFPR N +D +
Sbjct: 152 IEHNARVNSTIPRDKLLVYNVKQGWEPLCEFLGVPVPDVPFPRLNVKDQL 201
BLAST of mRNA_H-elongata_contig198224.5547.1 vs. uniprot
Match: A0A183AA35_9TREM (Uncharacterized protein n=1 Tax=Echinostoma caproni TaxID=27848 RepID=A0A183AA35_9TREM) HSP 1 Score: 78.6 bits (192), Expect = 8.290e-16 Identity = 36/60 (60.00%), Postives = 40/60 (66.67%), Query Frame = 1
Query: 19 KADLIRHNARVKAVVPADRLLEFSVKSGWEPLCTFLGVPVPDVPFPRSNSRDTITNRIAR 198
K +R N V+ VPADRLL F VK GWEPLC FLG P+PDVPFP N R T+ RI R
Sbjct: 179 KRAFVRRNEEVERTVPADRLLVFQVKDGWEPLCRFLGKPIPDVPFPHVNDRKTMKGRIRR 238
BLAST of mRNA_H-elongata_contig198224.5547.1 vs. uniprot
Match: D8LU57_ECTSI (UEV domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU57_ECTSI) HSP 1 Score: 79.7 bits (195), Expect = 1.030e-15 Identity = 44/75 (58.67%), Postives = 50/75 (66.67%), Query Frame = 1
Query: 1 MEEVEAKADLIRHNARVKAVVPADR---LLEFSVKSGWEPLCTFLGVPVPDVPFPRSNSRDTITNRIARCV-HAW 213
MEE EAKAD +RHN V A V AD LLEFSV+ GW PLC FL V VPDVPFP+ NSR+ + R+ R H W
Sbjct: 326 MEEDEAKADYVRHNKEVLAHVGADNGRELLEFSVEQGWGPLCKFLDVSVPDVPFPKVNSREELKIRLNRFNRHGW 400
BLAST of mRNA_H-elongata_contig198224.5547.1 vs. uniprot
Match: M5G920_DACPD (Uncharacterized protein n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5G920_DACPD) HSP 1 Score: 78.2 bits (191), Expect = 1.040e-15 Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 1
Query: 31 IRHNARVKAVVPADRLLEFSVKSGWEPLCTFLGVPVPDVPFPRSNSRDTITNRI 192
+RHN ++ +VP +RLLEF+VK GWEPLC FLGVPVPDVPFP +N T+ I
Sbjct: 165 VRHNEFIRKIVPPERLLEFNVKEGWEPLCKFLGVPVPDVPFPHTNDSATVKANI 218
BLAST of mRNA_H-elongata_contig198224.5547.1 vs. uniprot
Match: C5FQD9_ARTOC (Uncharacterized protein n=1 Tax=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) TaxID=554155 RepID=C5FQD9_ARTOC) HSP 1 Score: 77.4 bits (189), Expect = 2.010e-15 Identity = 35/59 (59.32%), Postives = 40/59 (67.80%), Query Frame = 1
Query: 34 RHNARVKAVVPADRLLEFSVKSGWEPLCTFLGVPVPDVPFPRSNSRDTITNRIARCVHA 210
+H V+ VVPAD LLEF K GWEPLC FLGVPVPDVP+PR N D R A+ + A
Sbjct: 174 KHYQMVRDVVPADNLLEFEAKDGWEPLCKFLGVPVPDVPYPRVNDTDNFWERFAKGIGA 232
BLAST of mRNA_H-elongata_contig198224.5547.1 vs. uniprot
Match: A0A5B1LWX7_9ACTN (Uncharacterized protein n=1 Tax=Nocardioides antri TaxID=2607659 RepID=A0A5B1LWX7_9ACTN) HSP 1 Score: 73.6 bits (179), Expect = 2.430e-15 Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 1
Query: 13 EAKADLIRHNARVKAVVPADRLLEFSVKSGWEPLCTFLGVPVPDVPFPRSNSR 171
EAKA RHNA V+A VP DRL+E+S GWEPLC LG+PVPD PFPR N++
Sbjct: 25 EAKAAYERHNAHVRATVPPDRLVEWSPGDGWEPLCAALGLPVPDEPFPRVNTK 77 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig198224.5547.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig198224.5547.1 >prot_H-elongata_contig198224.5547.1 ID=prot_H-elongata_contig198224.5547.1|Name=mRNA_H-elongata_contig198224.5547.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp MEEVEAKADLIRHNARVKAVVPADRLLEFSVKSGWEPLCTFLGVPVPDVPback to top mRNA from alignment at H-elongata_contig198224:383..981+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig198224.5547.1 ID=mRNA_H-elongata_contig198224.5547.1|Name=mRNA_H-elongata_contig198224.5547.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=599bp|location=Sequence derived from alignment at H-elongata_contig198224:383..981+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig198224:383..981+ >mRNA_H-elongata_contig198224.5547.1 ID=mRNA_H-elongata_contig198224.5547.1|Name=mRNA_H-elongata_contig198224.5547.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=462bp|location=Sequence derived from alignment at H-elongata_contig198224:383..981+ (Himanthalia elongata Himel1 dioecious)back to top |