mRNA_H-elongata_contig1981.5543.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig1981.5543.1 vs. uniprot
Match: A0A6H5LHK3_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHK3_9PHAE) HSP 1 Score: 280 bits (715), Expect = 6.420e-81 Identity = 151/269 (56.13%), Postives = 193/269 (71.75%), Query Frame = 2
Query: 380 KVID-ITLPKEAVSEVLETFDAELLALTRLNTPNIVKVYGASVTASVKIVVVSEFVEGGTLRDLLNNTRKLKHLHTRMRLAIARDVAAGMKSLYAHGMQHRHLSSKTILLTSNLQAKVFGFGLSMTSQMISHFSVKDGYESPKDKSDKDLLWASREVLAGAGFSEKSDVYSFGIVLWEIMQADGSIPYEGMEPNE----------------------------VFAAKYNGQGPRIPRNTPPEISSLMESCWSNLPANRPSFEKICQVL 1099
KV D + + KE ++EVL+TFDAELLAL+RL+TP+IV+ YGASV+ + +I++VSEFVEGG LR LL+N KLK L R+RL IA+D A GM+SLYAHGMQHRHLSS +ILLTS+ +AK+ G GL+MT+++I F+ G E + +++K+L WASREVLAGAGFSEKSDVYSFGIVLWEIMQ D S+PY + P++ V AKYNG+GP IP + P IS LM+SCWSNLPA+RPSF+K+ L
Sbjct: 184 KVFDTLGMSKEEMTEVLDTFDAELLALSRLSTPHIVQAYGASVSPA-EIILVSEFVEGGVLRRLLHNPLKLKDLTQRVRLGIAKDTALGMRSLYAHGMQHRHLSSNSILLTSDYRAKILGVGLTMTTELIDFFT---GDERAEKQAEKELPWASREVLAGAGFSEKSDVYSFGIVLWEIMQKDPSLPYANLSPSQHPLKSLNPFYTVRTKSMNPSFIVTANQQVVGAKYNGEGPSIPEDCPVAISRLMKSCWSNLPADRPSFDKVVDTL 448
BLAST of mRNA_H-elongata_contig1981.5543.1 vs. uniprot
Match: D7FPQ4_ECTSI (Zn binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPQ4_ECTSI) HSP 1 Score: 292 bits (748), Expect = 6.530e-79 Identity = 149/241 (61.83%), Postives = 194/241 (80.50%), Query Frame = 2
Query: 380 KVID-ITLPKEAVSEVLETFDAELLALTRLNTPNIVKVYGASVTASVKIVVVSEFVEGGTLRDLLNNTRKLKHLHTRMRLAIARDVAAGMKSLYAHGMQHRHLSSKTILLTSNLQAKVFGFGLSMTSQMISHFSVKDGYESPKDKSDKDLLWASREVLAGAGFSEKSDVYSFGIVLWEIMQADGSIPYEGMEPNEVFAAKYNGQGPRIPRNTPPEISSLMESCWSNLPANRPSFEKICQVL 1099
KV D + + KE ++EVL+TFDAELLAL+RL+TP+IV+ YGASV+ + +I++VSEFVEGG LR LL+N KLK L R+RL IA+D+A GM+SLYAHGMQHRHLSS +ILLTS+ +AK+ G GL+MT+++I F+ G + +++++K+L WASREVLAGAGFSEKSDVYSFGIV WEIMQ D S+PY + P++V AKYNG+GP IP + P IS LM+SCWSNLPA+RPSF+K+ L
Sbjct: 1195 KVFDTLGMSKEEMTEVLDTFDAELLALSRLSTPHIVQAYGASVSPA-EIIMVSEFVEGGVLRRLLHNPLKLKDLTQRVRLGIAKDIALGMRSLYAHGMQHRHLSSDSILLTSDYRAKILGVGLTMTTELIDFFT---GDKRAEEQAEKELPWASREVLAGAGFSEKSDVYSFGIVFWEIMQKDPSLPYANLLPSQVVGAKYNGEGPSIPEDCPVAISRLMKSCWSNLPADRPSFDKVVDAL 1431
BLAST of mRNA_H-elongata_contig1981.5543.1 vs. uniprot
Match: G5A021_PHYSP (Protein kinase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A021_PHYSP) HSP 1 Score: 132 bits (333), Expect = 1.100e-30 Identity = 86/252 (34.13%), Postives = 128/252 (50.79%), Query Frame = 2
Query: 368 VLDEKVIDITLPKEAVS-------EVLETFDAELLALTRLNTPNIVKVYGASVTASVKIVVVSEFVEGGTLRDLLNNTRKLKHLHTRMRLAIARDVAAGMKSLYAHGMQHRHLSSKTILLTSNLQAKVFGFGLSMTSQMISHFSVKDGYESPKDKSDKDLLWASREVLAGAGFSEKSDVYSFGIVLWEIMQADGSIPYEGMEPNEV-FAAKYNGQGPRIPRNTPPEISSLMESCWSNLPANRPSFEKICQVL 1099
V+ KV+D++ ++ S E+L F E + L PNIV+ G S +A + +V EF+EGGTL ++L RK R+ A D+A GM L+ H + HR L S +LL + AK+ FGLS ++ G + W + EV+ +S K+DVYSF +VLWE++ D +P++G P + A P +PR TPP+I+ L+E CW+ P RP F I +VL
Sbjct: 22 VVAAKVVDLSAAAKSKSGGDALAKELLREFRREEEVASALRHPNIVQFLG-SASAPPRYCLVFEFMEGGTLAEVLRRNRKAPLDFFRL----ASDMAQGMSYLHEHSVMHRDLKSSNVLLDAQGTAKISDFGLSCVMEL--------GRSADLTAETGTYGWMAPEVIRHEPYSSKADVYSFAVVLWELLAKD--VPFKGQTPMQTAMAVAEQRMRPALPRQTPPKIAELIEHCWNQDPTRRPDFSSILKVL 258
BLAST of mRNA_H-elongata_contig1981.5543.1 vs. uniprot
Match: F0ZJE1_DICPU (Protein kinase domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZJE1_DICPU) HSP 1 Score: 131 bits (330), Expect = 1.520e-29 Identity = 81/226 (35.84%), Postives = 121/226 (53.54%), Query Frame = 2
Query: 428 ETFDAELLALTRLNT--PNIVKVYGASVTASVKIVVVSEFVEGGTLRDLLNNTRKLKHLHTRMRLAIARDVAAGMKSLYAHGMQHRHLSSKTILLTSNLQAKVFGFGLSMTSQMISHFSVKDGYESPKDKSDKDLLWASREVLAGAGFSEKSDVYSFGIVLWEIMQADGSIPYEGMEPNEVFAAKYNGQGPRIPRNTPPEISSLMESCWSNLPANRPSFEKICQVL 1099
E FD E+ ++ +++ PN + YGA+ + +VSE+V+GG+LRDLL N K K L +L+IA D+A M+ L++ G+ HR L S +L+T + AKV FG S + ++ G S W E+ ++E DVY+FGIVLWEI PYEG+ + G+ P +P + P E S LM++CW++ P RP F+ I Q L
Sbjct: 130 EEFDREITIMSLIDSDHPNFTRFYGANKQNPKYLFMVSEYVQGGSLRDLLLN--KDKPLTYFTQLSIALDIANAMQYLHSIGVIHRDLKSLNVLITDDYSAKVIDFGTSRAIDVSKQMTLNLGTSS----------WMGPELFRNEPYTELCDVYAFGIVLWEIFCRKE--PYEGVNSWSIPLMVAKGERPPVPSDCPSEYSKLMKACWADKPKKRPKFKDIHQTL 341
BLAST of mRNA_H-elongata_contig1981.5543.1 vs. uniprot
Match: D3BQC1_POLPP (Protein kinase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BQC1_POLPP) HSP 1 Score: 135 bits (340), Expect = 3.580e-29 Identity = 81/237 (34.18%), Postives = 132/237 (55.70%), Query Frame = 2
Query: 392 ITLPKEAVSEVLETFDAELLALTRLNTPNIVKVYGASVTASVKIVVVSEFVEGGTLRDLLNNTRKLKHLHTRMRLAIARDVAAGMKSLYAHGMQHRHLSSKTILLTSNLQAKVFGFGLSMTSQMISHFSVKDGYESPKDKSDKDLLWASREVLAGAGFSEKSDVYSFGIVLWEIMQADGSIPYEGMEPNEV-FAAKYNGQGPRIPRNTPPEISSLMESCWSNLPANRPSFEKICQVL 1099
I + ++ ++VL+ F EL L++L PNIV + A T + V+EF+ GG+L D+L++ + ++ +LAI +A GM L+ + HR + S +LL N+ K+ FGLS + + G SP +W + E+L G ++EK DVY+FGI+LWE+ G +PY G++ ++ A G P IP + PP++ L++SCW++ P+ RPSF +I Q L
Sbjct: 414 IKINEDVTNQVLDEFRKELTILSKLRHPNIVLLMAAC-THPPNLCFVTEFLNGGSLYDILHSKKIRMNMPLYKKLAI--QIAQGMNYLHLSNVIHRDIKSLNLLLDDNMNVKICDFGLSRLKTKSTAMTKSIG--SP--------IWMAPELLIGEDYTEKVDVYAFGIILWEL--GTGELPYSGLDSVQLALAVSTKGLRPTIPTSWPPQLHQLIQSCWNHEPSLRPSFTQILQQL 635
BLAST of mRNA_H-elongata_contig1981.5543.1 vs. uniprot
Match: UPI000644CD08 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644CD08) HSP 1 Score: 135 bits (339), Expect = 9.410e-29 Identity = 80/237 (33.76%), Postives = 131/237 (55.27%), Query Frame = 2
Query: 392 ITLPKEAVSEVLETFDAELLALTRLNTPNIVKVYGASVTASVKIVVVSEFVEGGTLRDLLNNTRKLKHLHTRMRLAIARDVAAGMKSLYAHGMQHRHLSSKTILLTSNLQAKVFGFGLSMTSQMISHFSVKDGYESPKDKSDKDLLWASREVLAGAGFSEKSDVYSFGIVLWEIMQADGSIPYEGMEPNEV-FAAKYNGQGPRIPRNTPPEISSLMESCWSNLPANRPSFEKICQVL 1099
I + ++ ++VL+ F EL L++L PNIV + A T + V+EF+ GG+L D+L++ + ++ +LAI +A GM L+ G+ HR + S +LL N+ K+ FGLS + + G SP +W + E+L G ++EK DVY+FGI+LWE+ G +PY G++ ++ A G P IP P ++ L++SCW++ P+ RPSF +I +L
Sbjct: 543 IKINEDVTTQVLDEFRKELTILSKLRHPNIVLLMAAC-TVPPNLCFVTEFLNGGSLYDILHSKKIRMNMPLYKKLAI--QIAQGMNYLHLSGVIHRDIKSLNLLLDDNMNVKICDFGLSRLKSKSTAMTKSIG--SP--------IWMAPELLVGDDYTEKVDVYAFGIILWEL--GTGELPYSGLDSVQLALAVSTKGLRPTIPSAWPSMLNQLIQSCWNHEPSQRPSFTQILSIL 764
BLAST of mRNA_H-elongata_contig1981.5543.1 vs. uniprot
Match: A0A6B2LF92_9EUKA (Protein kinase domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LF92_9EUKA) HSP 1 Score: 120 bits (301), Expect = 9.430e-27 Identity = 78/216 (36.11%), Postives = 119/216 (55.09%), Query Frame = 2
Query: 455 LTRLNTPNIVKVYGASVTASVKIVVVSEFVEGGTLRDLLNNTRKLKHLHTRMRLAIARDVAAGMKSLYAHGMQHRHLSSKTILLTSNLQAKVFGFGLSMT----SQMISHFSVKDGYESPKDKSDKDLLWASREVLAGAG-FSEKSDVYSFGIVLWEIMQADGSIPYEGMEPNEVFAAKYNGQGPRIPRNTPPEISSLMESCWSNLPANRPSFEKI 1087
++ L PN++ G + + KI+V+ E++E G+L DLL RK +M IA+++A GM L+ G+ HR L+SK ILL+S++QAKV FGLS SQ +S F++ + W + EV+ A F+ SDVYS+GI+LWE+ + P + + +G P IP P+ +L+E+CW LP +RPSFE+I
Sbjct: 1 MSSLRHPNVILYMGVCIDTNFKIIVM-EYMEKGSLNDLL---RKEPFTLGKM-FKIAKEIALGMNYLHGEGILHRDLTSKNILLSSHMQAKVADFGLSKIKLAESQNVS-FTMGS------------IAWMAPEVIENASNFTRASDVYSYGIILWEMCTGEDPCPRDIQPVHFAKLVLESGYRPEIPPTVSPKWKALIETCWDTLPKSRPSFEQI 198
BLAST of mRNA_H-elongata_contig1981.5543.1 vs. uniprot
Match: A0A8J4PTI7_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PTI7_9MYCE) HSP 1 Score: 128 bits (322), Expect = 2.050e-26 Identity = 72/225 (32.00%), Postives = 124/225 (55.11%), Query Frame = 2
Query: 425 LETFDAELLALTRLNTPNIVKVYGASVTASVKIVVVSEFVEGGTLRDLLNNTRKLKHLHTRMRLAIARDVAAGMKSLYAHGMQHRHLSSKTILLTSNLQAKVFGFGLSMTSQMISHFSVKDGYESPKDKSDKDLLWASREVLAGAGFSEKSDVYSFGIVLWEIMQADGSIPYEGMEPNEVFAAKYNGQGPRIPRNTPPEISSLMESCWSNLPANRPSFEKICQVL 1099
++ F+ E+ +T L+ I ++YGA+ + +VSEFV+GG++RDLL +++ + ++ +AI D+ MK L++ G+ HR L S +L+T +L+AK+ G G+ + ++ G W + EV+ G ++E DVYSFGI+LWE+ S PY G+ + G+ P+IP + P + S L++SCW++ RP+F +I L
Sbjct: 951 IDEFNREVTIMTLLDHECITRLYGANKEDPNNVFLVSEFVKGGSMRDLLLLNKQVLFYYQKISIAI--DIVNAMKYLHSLGVFHRDLKSGNVLITQDLRAKLIGVGIFRDPDLYKKLTLDPG-----------TSWTAPEVIKGQQYTESCDVYSFGIILWELYCR--SEPYPGVTSWTIPVIVCEGKRPKIPSDCPSDYSKLIKSCWADKAKKRPTFNEIHSTL 1160
BLAST of mRNA_H-elongata_contig1981.5543.1 vs. uniprot
Match: A0A6B2L3S5_9EUKA (Protein kinase domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L3S5_9EUKA) HSP 1 Score: 120 bits (302), Expect = 1.520e-25 Identity = 82/227 (36.12%), Postives = 116/227 (51.10%), Query Frame = 2
Query: 425 LETFDAELLALTRLNTPNIVKVYGASVTASVKIVVVSEFVEGGTLRDLLNNTRKLKHLHTRMRLAIARDVAAGMKSLYAHGMQHRHLSSKTILLTSNLQAKVFGFGLSMTSQMISH-FSVKDGYESPKDKSDKDLLWASREVLAGAG-FSEKSDVYSFGIVLWEIMQADGSIPYEGMEPNEVFAAKYNGQGPRIPRNTPPEISSLMESCWSNLPANRPSFEKICQVL 1099
+E FD E+ L+ L PN++ G + KI+V+ E++E G+L +LL K K L + IA ++A GM L+ + HR L+SK ILL+ +++AKV FGLS SH +S G + W + EV+A A FS+ SDVYS+GI+LWEI P E N + P IP + L+ SCW + P RPSF+KI L
Sbjct: 126 IELFDQEVSILSSLRHPNVILYMGVCLDKD-KIIVM-EYMENGSLSELL----KKKELRSHQIHKIATEIALGMNYLHGENILHRDLTSKNILLSKHMEAKVADFGLSKVKLAESHTYSYTMG----------SIAWMAPEVIANASKFSKSSDVYSYGIILWEIWTGCDPCPKEIAIVNLANKVLHEQYRPTIPPTVHAKWQDLIRSCWESDPDQRPSFDKILGTL 336
BLAST of mRNA_H-elongata_contig1981.5543.1 vs. uniprot
Match: A0A251RJM1_PRUPE (Protein kinase domain-containing protein n=15 Tax=Prunus TaxID=3754 RepID=A0A251RJM1_PRUPE) HSP 1 Score: 125 bits (313), Expect = 1.940e-25 Identity = 90/246 (36.59%), Postives = 130/246 (52.85%), Query Frame = 2
Query: 425 LETFDAELLALTRLNTPNIVKVYGASVTASVKIVVVSEFVEGGTLRDLLNNTRKLKHLHTRMRLAIARDVAAGMKSLYAHG--MQHRHLSSKTILLTSNLQAKVFGFGLSM--TSQMISHFSVKDGYESPKDKSDKDLLWASREVLAGAGFSEKSDVYSFGIVLWEIMQADGSIPYEGMEPNEVFAA-KYNGQGPRIPRNTPPEISSLMESCWSNLPANRPSFEKICQVL-----SPSTGLPQGGQ 1132
L+ F E+ + R+ PN+V GA VT + +V+E++ G+L L++ + L R RL +A DVA G+ L+ + H L S +L+ N AKV FGLS + IS SV E W + E L G +EKSDVYSFG++LWE++ + P+ G+ P +V A + + IP NTPP ++SLMESCW++ PA RPSF I + L SP +P GG+
Sbjct: 723 LKEFLREVAIMKRVRHPNVVLFMGA-VTKRPHLSIVTEYLPRGSLYRLIHRPASGELLDQRRRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTAKVCDFGLSRFKANTFISSKSVAGTPE-----------WMAPEFLRGEPSNEKSDVYSFGVILWELVTMEQ--PWSGLSPAQVVGAVAFQNRRLAIPANTPPMLASLMESCWADDPAQRPSFASIVESLKRLLKSPLQLVPVGGK 954 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1981.5543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1981.5543.1 >prot_H-elongata_contig1981.5543.1 ID=prot_H-elongata_contig1981.5543.1|Name=mRNA_H-elongata_contig1981.5543.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bp MRLAIARDVAAGMKSLYAHGMQHRHLSSKTILLTSNLQAKVFGFGLSMTSback to top mRNA from alignment at H-elongata_contig1981:2566..6578- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1981.5543.1 ID=mRNA_H-elongata_contig1981.5543.1|Name=mRNA_H-elongata_contig1981.5543.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4013bp|location=Sequence derived from alignment at H-elongata_contig1981:2566..6578- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1981:2566..6578- >mRNA_H-elongata_contig1981.5543.1 ID=mRNA_H-elongata_contig1981.5543.1|Name=mRNA_H-elongata_contig1981.5543.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1194bp|location=Sequence derived from alignment at H-elongata_contig1981:2566..6578- (Himanthalia elongata Himel1 dioecious)back to top |